Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0768 ATGGGAGGAAGGAACACTGTGCTTTTAGATGCTCTAAGTTCAAGGATCCCATTAGTGAGTGATATTCCGACAATAATCTTTGGAGTGGATGTAACTCACTCGGATACCGGAGAAGATTCTTCTCCTTCAATAGCTGCTGTCGTGGCATCCCAAGATTGGCTGGAAATTATTAAGTACATCAGTCTAGTATATGATCAGCCACATAGGGAAGAACTTATTCAATACTTGTTCAAAACTTGGAAAGATCCTCTATGTGGTTCGGGAGCTTTTGATTTCTTTTTAGAAGGCAACAGGACAAAAACCGTCGAGGATAATTTTCTACAGGTAAGGCAGCTTCCCTTTGGTAATTTTCGGTCTTTTCCGGCTAGTTTTCGACTTGAGCATTTTGGTTCTAGGGATGGTGTAAGTGAAGGTCAATTTTATCAAGTTCTACTTTACGAACTCGATGCCATTCGTAAGGCTTGTGCGTCATTGGAACCGAGTTATGAACCTCCCAGTACACTTATTGTGGTCCAAAAGCGGCATCACACCAGACCCTTTGCGAACAACCACAAAGATCGAAGTAGCAGCGATAAGAGTGGTAACATTCAACCAGTCATGCCAGAATCCAGTCGGCCGCCTCCTTATCATGTTATTTGGGACGAGAACAATTTTAGTCTCGACGAGATTCAATCGCTCACAAACAACCTTTGTCACACGTATGCTCGATGCACAAGATCGGTTTCTATAGGTAACTCCAGCATATTATGCACATCTTGCCGCCTATTGAGCTCGGTTCTACATGGAAACCAATCCGATCCGAGTGAGCACGATAGAACGCAATGTACACGGATGAAAAATGGGTCTGGTGTTAAGCCCTTGCCGGCACTAAAAGAGAATGTGAAAAATGTAATGTTCTATTGTTGA 906 43.05 MGGRNTVLLDALSSRIPLVSDIPTIIFGVDVTHSDTGEDSSPSIAAVVASQDWLEIIKYISLVYDQPHREELIQYLFKTWKDPLCGSGAFDFFLEGNRTKTVEDNFLQVRQLPFGNFRSFPASFRLEHFGSRDGVSEGQFYQVLLYELDAIRKACASLEPSYEPPSTLIVVQKRHHTRPFANNHKDRSSSDKSGNIQPVMPESSRPPPYHVIWDENNFSLDEIQSLTNNLCHTYARCTRSVSIGNSSILCTSCRLLSSVLHGNQSDPSEHDRTQCTRMKNGSGVKPLPALKENVKNVMFYC 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8640644 8642271 + Conep16aG0313100.1 Cone16ag0768 455202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0768 301 SUPERFAMILY Ribonuclease H-like 13 243 IPR012337 -
Cone16ag0768 301 ProSiteProfiles Piwi domain profile. 1 243 IPR003165 GO:0003676(InterPro)
Cone16ag0768 301 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 288 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Cone16ag0768 301 MobiDBLite consensus disorder prediction 262 282 - -
Cone16ag0768 301 MobiDBLite consensus disorder prediction 180 206 - -
Cone16ag0768 301 Pfam Piwi domain 1 79 IPR003165 GO:0003676(InterPro)
Cone16ag0768 301 Pfam Piwi domain 197 244 IPR003165 GO:0003676(InterPro)
Cone16ag0768 301 Pfam Piwi domain 132 196 IPR003165 GO:0003676(InterPro)
Cone16ag0768 301 Gene3D - 15 200 IPR036397 GO:0003676(InterPro)
Cone16ag0768 301 Gene3D - 201 301 IPR036397 GO:0003676(InterPro)
Cone16ag0768 301 SMART Piwi_a_2 1 258 IPR003165 GO:0003676(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0768 Cone-Chr16:8640644 Cone4ag0276 Cone-Chr4:1247320 3.98E-103 dispersed
Cone16ag0768 Cone-Chr16:8640644 Cone7ag0283 Cone-Chr7:1195885 1.44E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0768 K11593 - csv:101213206 337.806