Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone16ag0780 | ATGGCAACTATAGTCTCCGAGTCCGACTATGATAGCAGTTGTTCGTCCATAACCGTACCGGACTCCACCCGAAGCTGGATGTCCAACCTGAGCTTCGGAAGCAACCGCCTTAGCTCCGTCTCGGTCCAGTCCAACCCAACAGATCAAATCATGTCATCACTTTACACTTCCCAGAAGCCCCACAAGGCTAACCAGGCTGCATGGGAAGCTATGCGTCGGTTAAGGGCGGTGAAAGGCGGCCGAATCGGGTTGGAACACTTCCGGCTCCTACGCCGCCTAGGGAGTGGTGATATCGGAAACGTATATCTATGTCAGATAAGGAATATTCCGGTTCCGGTGAAGGGTGGTTTGGCGCCTCCTCCTCCTCATCCTCAATGCTTGTATGCTATGAAAGTGGTGGATAGGGAGGCACTTACTATAAGGAACAAGCTGGGGAGAGCTGAGATGGAGAAGGAGATTTTGGGGATGCTTGATCATCCTTTCTTGCCAACTCTTTATGCTGAGTTTGAGGCTACTCATTACTCATGCTTGGTAATGGAGTTTTGTCCCGGCGGAGATCTTTATGCCGCCCGGCAATGCCTGCCCGGAAAACGCTTCAGCATTTCAGCCGCTAAATTCTACGCAGCAGAGACTATCTTAGCCATAGAGTATCTGCACATGATGGGAATAGTTTATAGAGACTTAAAGCCAGAAAATGTCCTCGTTAGAGAAGATGGTCATATCATGCTTTCAGACTTTGATCTTTGCCTCAAATGCGACGTCGTTCCAAAGCTCTTAAGATCACAAACCACTAGGTACTATAAAAAGCAATCAATTATCAAAATATCCTCACCATCATCACCTACACCTTCTTGTTACTCCATATCATCACCCATGCAACCTGTCCTCTCCTGCTTCTCTAAATCCTCCAAAAAGAAAAAACCTACAACCATCACCACCATAACAGAACAAGCTCATAGTCATGATCATGATGATGAACATGATCCTGATCAGGATCACGAACAGGAATATTATGATCCAGAGCTAGTAGCTGAGCCAATAGAGGCAAGATCAAAGTCATTTGTTGGGACCCACGAGTACTTGGCGCCAGAAGTGATATCAGGACAAGGGCATGGGAGTGCAGTTGATTGGTGGACCCTAGGTGTGTTTCTGTACGAGCTGTTGTACGGGAAAACTCCATTCAAGGGTGAAAACAATGAGAAAACCCTAATCAACATACTTAAGCAGCCATTAAGTTTTCCAAGAAGCTATAACAACAGCGTTAGAAGTTGTAGCAGCGAAGAGGAGGAGATGTGGATCAGGGTTGAGGATTTGATCAGGAAGCTTCTGGTGAAGAATCCAAAGAAGAGGATCGGAGGCTTAAAGGGTTCTGTTGAGATTAAGAGGCATGATTTTTTCAAGGATGTTAATTGGGCTTTGATTAGGTCTGTTAAGCCACCTCAAATCCCTAATTGTAACACTACTGATAGTGATCATAATCAGATTAAGAGTAAGATTAGGGCTAATTACTTACCAAAGTTGCTGAGCAAGAAGGAGAGGAAGGAACCTTATCAGATTCCTCAACATCATCAGTATCATCACCATGTTGATTACTTTTAA | 1599 | 45.09 | MATIVSESDYDSSCSSITVPDSTRSWMSNLSFGSNRLSSVSVQSNPTDQIMSSLYTSQKPHKANQAAWEAMRRLRAVKGGRIGLEHFRLLRRLGSGDIGNVYLCQIRNIPVPVKGGLAPPPPHPQCLYAMKVVDREALTIRNKLGRAEMEKEILGMLDHPFLPTLYAEFEATHYSCLVMEFCPGGDLYAARQCLPGKRFSISAAKFYAAETILAIEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLLRSQTTRYYKKQSIIKISSPSSPTPSCYSISSPMQPVLSCFSKSSKKKKPTTITTITEQAHSHDHDDEHDPDQDHEQEYYDPELVAEPIEARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYELLYGKTPFKGENNEKTLINILKQPLSFPRSYNNSVRSCSSEEEEMWIRVEDLIRKLLVKNPKKRIGGLKGSVEIKRHDFFKDVNWALIRSVKPPQIPNCNTTDSDHNQIKSKIRANYLPKLLSKKERKEPYQIPQHHQYHHHVDYF | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 8698556 | 8700332 | + | Conep16aG0314300.1 | Cone16ag0780 | 455214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone16ag0780 | 532 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 223 | 235 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cone16ag0780 | 532 | Gene3D | Phosphorylase Kinase; domain 1 | 85 | 181 | - | - | |
| Cone16ag0780 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 349 | 484 | - | - | |
| Cone16ag0780 | 532 | MobiDBLite | consensus disorder prediction | 308 | 334 | - | - | |
| Cone16ag0780 | 532 | FunFam | serine/threonine-protein kinase D6PK-like | 349 | 484 | - | - | |
| Cone16ag0780 | 532 | MobiDBLite | consensus disorder prediction | 317 | 334 | - | - | |
| Cone16ag0780 | 532 | ProSiteProfiles | Protein kinase domain profile. | 87 | 466 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone16ag0780 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 182 | 251 | - | - | |
| Cone16ag0780 | 532 | FunFam | Serine/threonine-protein kinase OXI1 | 186 | 254 | - | - | |
| Cone16ag0780 | 532 | SUPERFAMILY | Protein kinase-like (PK-like) | 73 | 485 | IPR011009 | - | |
| Cone16ag0780 | 532 | FunFam | protein kinase PINOID 2 | 85 | 181 | - | - | |
| Cone16ag0780 | 532 | Pfam | Protein kinase domain | 125 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone16ag0780 | 532 | Pfam | Protein kinase domain | 351 | 466 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone16ag0780 | 532 | SMART | serkin_6 | 87 | 466 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone16ag0780 | 532 | PANTHER | FLIPPASE KINASE 1-RELATED | 38 | 496 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0780 | Cone-Chr16:8698556 | Cone5ag1793 | Cone-Chr5:12725115 | 2.91E-133 | dispersed | |
| Cone16ag0780 | Cone-Chr16:8698556 | Cone2ag0261 | Cone-Chr2:1333294 | 2.28e-313 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 82227 | PF14309 | DUF4378 | 1.40E-16 | No_clan | Cone | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone16ag0780 | K08286 | - | mdm:103448350 | 663.299 |