Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0901 ATGGCGGTAATCCTTCTCTTCCTCATCTCATCTCTCACACTTCTCTCCACCTCACAATCCGCCGCCGCAGCCGCCGGAAAAAGATCCTCTGCCGGAGCTCTCACCCAGAACTACTACCAAACCTCCTGTCCGAGATTCACACAAATTATCCAAGACACTATCACAAACAAACAGATCACAACTCCCACCACCGCAGCCGCCACACTCCGTCTCTTCTTCCATGACTGCCTCCTGAACGGCTGCGATGCCTCCGTCCTCATCTCCTCCACCCCATTCAACAAAGCCGAGCGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACGTCGTCGTCCGCGCCAAAACCGCCCTCGAACTCGCCTGCCCCAACACGGTCTCATGCGCGGATATCCTCGCCGTTGCCACTCGCGATCTCGTCACAATGGTCGGCGGGCCGTATTACGACGTAGTACTGGGCCGCAAAGACGGGTTGGAGTCCAAAGCCTCCACCGTGGCCGGCCATCTTCCTCAGCCCACAATGTCCATCACACAAATCATCAGAATCTTCAGCTCGAGAGGATTCACCGTCCAAGAGATGGTCGCGTTAAGTGGGGCCCATACCATCGGATTCTCTCACTGCAAGGAGTTCAGCGCAGGGATCTACAATTACAGTAAAACCTCACAGTCCGATCCTCAATACAACCCCAGATATGCGCAAGGATTGCAGAATGCGTGTCGGAATTTTCAGAAAAATCCGACCTTGTCCGTGTTTAACGACTTGATGACGCCGAACAAGTTTGATAATTCTTACTACCAGAACCTTCCGAAGGGGTTGGGATTGTTGAAATCGGATCATGGGTTGTATAGTGATGTAAGGACAAAGAGGTTTGTGGAGGAGTATGGGGCGGATCAGGACAAGTTCTTTCAGGCATTTCGTCGAGCAATTGAGAAGCTTAGTGTTTATGGCGTCAAGACGGGGAGTCAAGGTCAGATCAGGCACAGGTGTGATGCTTTTAATTGA 1008 52.98 MAVILLFLISSLTLLSTSQSAAAAAGKRSSAGALTQNYYQTSCPRFTQIIQDTITNKQITTPTTAAATLRLFFHDCLLNGCDASVLISSTPFNKAERDADINLSLPGDAFDVVVRAKTALELACPNTVSCADILAVATRDLVTMVGGPYYDVVLGRKDGLESKASTVAGHLPQPTMSITQIIRIFSSRGFTVQEMVALSGAHTIGFSHCKEFSAGIYNYSKTSQSDPQYNPRYAQGLQNACRNFQKNPTLSVFNDLMTPNKFDNSYYQNLPKGLGLLKSDHGLYSDVRTKRFVEEYGADQDKFFQAFRRAIEKLSVYGVKTGSQGQIRHRCDAFN 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9346509 9347516 - Conep16aG0327000.1 Cone16ag0901 455335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0901 335 PANTHER - 18 335 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 Pfam Peroxidase 53 299 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 SUPERFAMILY Heme-dependent peroxidases 34 335 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 ProSiteProfiles Plant heme peroxidase family profile. 33 335 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 FunFam Peroxidase 37 181 - -
Cone16ag0901 335 CDD secretory_peroxidase 34 334 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone16ag0901 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0901 335 Gene3D Peroxidase, domain 2 172 314 - -
Cone16ag0901 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Cone16ag0901 335 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601(InterPro)
Cone16ag0901 335 Gene3D - 37 335 - -
Cone16ag0901 335 FunFam Peroxidase 172 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0121 Cone-Chr13:713201 Cone16ag0901 Cone-Chr16:9346509 1.75E-135 dispersed
Cone16ag0901 Cone-Chr16:9346509 Cone19ag0123 Cone-Chr19:688592 3.25E-131 dispersed
Cone16ag0126 Cone-Chr16:712587 Cone16ag0901 Cone-Chr16:9346509 8.37E-129 wgd
Cone16ag0901 Cone-Chr16:9346509 Cone18ag1349 Cone-Chr18:9296612 4.65E-31 wgd
Cone16ag0901 Cone-Chr16:9346509 Cone2ag0883 Cone-Chr2:34735984 4.55E-68 wgd
Cone16ag0901 Cone-Chr16:9346509 Cone2ag0152 Cone-Chr2:793258 2.85E-215 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0901 K00430 - csv:101219829 481.87