Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0905 ATGCCTCCAAACTCAGTTTCAATCACAATTGACAACCCCAAAAACTTGCCTCTTGTAGAAATCAATGCCAATCCAGATTCATCATCATCATTACTGCCTGAAAAGCAGAAGAAATCAGTGAATCCCAAGCAATTCACTTGGGTTCTCCTCCTAAAAGCTCATAGAGCTGTAACTTCATTTTCATGGCTGCCCATGGCTGCCAAATCCATGTTCCTTTCACTTAGACAAAGAATCTCCTTATCCAACTTGAGTCAAGAACAAGAAGATCCAATTGGAAGAGGCAAATTGTACAAGTTCATCAAAATCTTCCTGGCCATGTCAATATTAGCTCTGATAGTTGAAGTGATTGCACATTTCAAGAAGTGGAATTTGGCTCAAGTTCATCAAGGTCTTGTTCAATGGATTTATATAAACTGGTTGGATTTTAGAGTTGACTATGTTGCTCCTTTTGTCATCATGCTTTCGAAATTCTGCATTGTGTTGTTCTTGATCCAATCGGTCGATCGCCTTGTTCTCTGTCTTGGGTGTTTTTGGATCAAGTACAAGAAATTAAAGCCCACCATTACAGAAGACAGTGCTTATGACATGAAAGCTCCTTTGAGTTTTCCCATGGTCCTTGTTCAAATTCCAATGTGCAATGAAAGAGAGGTGTATGAGCAATCTATTGCTGCAGCATGTGAGCTAGATTGGCCGAGAAACCGGATATTGATTCAAGTTCTAGACGATTCGGACGATGAGAATCTTAAGGCTCTGATAAGGAATGAAGTTTTGTCATGGAATGAAAAGGGTGTCAATATAATCTACAGACATAGAGTTATAAGGACCGGTTATAAAGCTGGAAATCTCAAATCGGCAATGGGATGTGACTATGTCAAGGACTATGAATTTGTTGCTATCCTCGATGCAGATTTCCAGCCTAATCCCGATTTCCTTAAACAAACCATTCCTTACTTCAAGGGAAATCCTGAACTGGGTCTTGTTCAAGCAAGATGGAGCTTTGTGAACAGGGATGGGAATTTACTTACAAGGCTCCAAAACATCAATCTATGTTTCCATTTTGAAGTGGAGCAGCAAGTCAATGGGATGCTCCTCAATTTCTTCGGATTCAATGGGACGGCAGGTGTTTGGAGGATCAAGGCCTTGGAAGAATCCGGTGGGTGGCTCGAAAGAACGACAGTTGAAGACATGGATATTGCAGTTAGAGCTCACTTGAATGGATGGAAATTCATCTACCTTAATGATGTTAAGGTGCTTTGCGAACTGCCTGAATCCTATGAAGCATATAAGAAACAACAACATCGATGGCACTCCGGTCCCATGCAGCTGTTCCGGTTATGTCTCCCTTCTATCATATCTTCAAAGATATCGGCATGGAAGAAAGCAAACTTGATATTTCTCTTCTTCCTTCTAAGAAAACTCATTCTACCCTTTTACTCATTCACATTGTTTTGCATTATACTGCCATTGACTATGTTCATCCCTGAGGCGGAACTTCCTCTGTGGGTAATATGCTACATTCCGGTTTTCCTGTCGTTCTTGAACATCCTACCTTCCCCGAAATCATTCCCGTTCTTAATCCCTTACCTTCTATTCGAAAACACTATGTCGGTTACAAAATTCAATGCGATGGTTTCTGGGTTGTTTCAGCTAGGAAGTGCATATGAATGGGTAGTGACAAAGAAAACCGGAAGATCATCCGAATCAGACTTACTAGCATTTGCGGAAAGAGAAACGAAATCTTCAAACGACCAAGAGAAGATACATAGAAGGCATTCCGAATCGGGATTGGAACTGTTGAATAAGATCAAGCAACAAGAAGAAGTTCCTTTTTTGAAGAAGAAGAAGAAGAAGAAGAAGAGGAATATGCTTTATAGAAAAGAGCTTGCTCTTGCTTTTCTTTTGCTAACTGCAGCTGGTAGAAGTCTTTTATCTGCACAGGGGGTTCATTTCTATTTCTTGCTTTTTCAAGGGCTGTCTTTTCTTGTTGTTGGGTTGGACTTGATTGGTGAGCAGATAAGCTGA 2022 40.6 MPPNSVSITIDNPKNLPLVEINANPDSSSSLLPEKQKKSVNPKQFTWVLLLKAHRAVTSFSWLPMAAKSMFLSLRQRISLSNLSQEQEDPIGRGKLYKFIKIFLAMSILALIVEVIAHFKKWNLAQVHQGLVQWIYINWLDFRVDYVAPFVIMLSKFCIVLFLIQSVDRLVLCLGCFWIKYKKLKPTITEDSAYDMKAPLSFPMVLVQIPMCNEREVYEQSIAAACELDWPRNRILIQVLDDSDDENLKALIRNEVLSWNEKGVNIIYRHRVIRTGYKAGNLKSAMGCDYVKDYEFVAILDADFQPNPDFLKQTIPYFKGNPELGLVQARWSFVNRDGNLLTRLQNINLCFHFEVEQQVNGMLLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIYLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIISSKISAWKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFLSFLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKTGRSSESDLLAFAERETKSSNDQEKIHRRHSESGLELLNKIKQQEEVPFLKKKKKKKKRNMLYRKELALAFLLLTAAGRSLLSAQGVHFYFLLFQGLSFLVVGLDLIGEQIS 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9361254 9364032 - Conep16aG0327400.1 Cone16ag0905 455339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0905 673 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 195 422 IPR029044 -
Cone16ag0905 673 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 126 671 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cone16ag0905 673 SUPERFAMILY Nucleotide-diphospho-sugar transferases 205 505 IPR029044 -
Cone16ag0905 673 FunFam probable xyloglucan glycosyltransferase 5 196 421 - -
Cone16ag0905 673 Pfam Glycosyl transferase family group 2 297 507 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0905 Cone-Chr16:9361254 Cone4ag1865 Cone-Chr4:13366518 0 dispersed
Cone16ag0905 Cone-Chr16:9361254 Cone2ag0150 Cone-Chr2:782959 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0905 K20887 - csv:101208151 1052.35