Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0908 ATGGCAAGGATGAATTTCTGCAAAGATGTTCTACCATTATCTGTGATGATAACAATGGAGTGCACAAACGTGGGGCTAAACACTCTGTTCAAAGCAGCCACATCTAGTGGGATGAGCTACCATGTCTTTATTGTCTATGCTTATGCTGTTGCTGCTCTAGTTCTCTTCCCTGCTCCCTTCATCTCTCGCAGATCAAGAGTGCTTCCTCCACTGAATTTCTCCATTGTCTCTAAAATTGGTCTTCTTGGTTTAATTGGGAGTTCATCACAGATAATGGGGTATACAGGAATAAGTTACAGCTCTCCAACACTTGCTTCAGCCATCAGCAACTTGGTGCCAGCTTTTACTTTCATTCTAGCTCTCATTTTCAGGATGGAAAAGGTAGTTTTGAAAAGCATAAGTAGCCAAGCAAAGATCTTTGGGGCAATTGTATCAATATCAGGTGCTTTTGTGATCACTCTCTACAAGGGCCCACATATTGTTCTGTTCTCTCCATCACCGCCTTCCTTGAGTTATCGGACGCTGAGCTCATCGGGACCAAGTAATTGGGTTATCGGCGGCGTTTTATTGTCCGGCGAGTATATTCTGGTCCCACTATGGTACATTGTTCAAACACAAATAATGAAAGAATACCCAGCAGAACTGACGGTGGTGTTCTTCTATAATCTAAGTGTTAGCATTATAGCCGCTATCGTAGCTGCATTTACCGAAAAGAATCCAAATGCTTGGATGTTGAAGCCTAACATAGCATTGGTCTCTGTTTTATGCTCTGGGCTGTTCGGATCATGCTTGAACAATGTAGGACATGCATGGGCACTTAAGATGAAGGGGCCAGTGTTTGTTGCTATGTTTAAGCCACTCTCGATTGCCATTGCGGTTGCTATGGGCATTCTGTTTCTCGGCGATGCTCTTTATCTCGGAAGTTTAATCGGAGCATCGATTATATCGATCGGGTTTTACACCGTAATGTGGGGTAAAGCAAAAGAGGAGATAGACGAAGATGAAAGCCTTGTAGCTAGTGTCATGGAATCACAATCAACTATGAAGTCTCCACTTCTAGAAAGCTACAAAACTGAAAAGATGTAG 1086 42.91 MARMNFCKDVLPLSVMITMECTNVGLNTLFKAATSSGMSYHVFIVYAYAVAALVLFPAPFISRRSRVLPPLNFSIVSKIGLLGLIGSSSQIMGYTGISYSSPTLASAISNLVPAFTFILALIFRMEKVVLKSISSQAKIFGAIVSISGAFVITLYKGPHIVLFSPSPPSLSYRTLSSSGPSNWVIGGVLLSGEYILVPLWYIVQTQIMKEYPAELTVVFFYNLSVSIIAAIVAAFTEKNPNAWMLKPNIALVSVLCSGLFGSCLNNVGHAWALKMKGPVFVAMFKPLSIAIAVAMGILFLGDALYLGSLIGASIISIGFYTVMWGKAKEEIDEDESLVASVMESQSTMKSPLLESYKTEKM 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9373736 9376228 - Conep16aG0327700.1 Cone16ag0908 455342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0908 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Cone16ag0908 361 Pfam EamA-like transporter family 200 323 IPR000620 GO:0016020(InterPro)
Cone16ag0908 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 327 - -
Cone16ag0908 361 PANTHER WAT1-RELATED PROTEIN 15 337 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0908 Cone-Chr16:9373736 Cone2ag0147 Cone-Chr2:768416 4.80E-233 dispersed
Cone16ag0908 Cone-Chr16:9373736 Cone16ag0909 Cone-Chr16:9376894 3.06E-102 tandem
Cone13ag1022 Cone-Chr13:8525596 Cone16ag0908 Cone-Chr16:9373736 8.84E-67 wgd
Cone16ag0908 Cone-Chr16:9373736 Cone2ag0145 Cone-Chr2:763239 2.08E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0908 - - - 0.0