Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0910 ATGGCATGGGGGAATCATTGTTACAACGACGTGCTTCCCTTCACGGCCATGATAGCGGCGGAGTGTGCGACCGTCGGCTTAAACACTCTCTTCAAAGCAGCGGTGGCTGATGGGCTGAGCTACTATGTCTTCATAGTCTACACACATGCAATCGCCGCTCTTCTCCTCCTCCCTCTCCCCTTCCTTTTCCGCAGTAAAATTGCCACACGTCCTCATCGTCCCAATTACAAGCTGTCTCTAGGCCTGAGATTAATCTGTCTCTCTCTTCTCAGTGTGACAACTCAAATATGTTCATATACTGGCTTGGAGTATAGTTCTCCCACTTTATCTTCTGCAATCAACAATCTCACTCCGGCGTTTACCTTCATTCTTGCCGTCACTTTAAGGATGGAAAAGCTAGCGTTAAGAAGCTTAAGCACACAAGCAAAAATAGTAGGGACGTTGGTGTCAATATCAGGTGCACTAATAGTTGTTCTCTACAAGGGCATACCATTAATCCTATCAATTACTCCGTCTAATAATGATTACTACTTAAGCTCATCGCAAACAAGCAATTGGATAATTGGTGGCTTACTGTTTGCTGCTCAAGATCTTCTACTTTCCACTTGGTACATTGTTCAGACCCAAGTGATAAAGATATACCCAGATGAGCTGCTTATGGTGTTAATGTACTTCATATGCACGACAATCGTAGCTATACCGGTTTGTTTAATAGCCGAATCGAACTATAATGCTTGGATATTGACAACCCGGAGAGAAGTCGTCACAGTTGCTTACACAGGAATTATCGGTCATGCTGGCGTGACGATTATTCATACATGGGGGCTTAATCTGAAGGGACCTGTTTATATAACAATATTCAGGCCAGTTTCCATTGCCATTGCAGCTACCATGGGTGTCTTATTTCTTGGAGATACTCTCTACATAGGGAGTGTTGTTGGAGCTTTAATCATATGCATTGGGTTCTATGCTGTGATGTGGGGAAAGGCAAAAGAGGATGAAATGAGCATAGAAGAAGAAGATAGTAGTATGACTAGGACCACCCCCTTCTTGCAAAATCATTAA 1065 43.38 MAWGNHCYNDVLPFTAMIAAECATVGLNTLFKAAVADGLSYYVFIVYTHAIAALLLLPLPFLFRSKIATRPHRPNYKLSLGLRLICLSLLSVTTQICSYTGLEYSSPTLSSAINNLTPAFTFILAVTLRMEKLALRSLSTQAKIVGTLVSISGALIVVLYKGIPLILSITPSNNDYYLSSSQTSNWIIGGLLFAAQDLLLSTWYIVQTQVIKIYPDELLMVLMYFICTTIVAIPVCLIAESNYNAWILTTRREVVTVAYTGIIGHAGVTIIHTWGLNLKGPVYITIFRPVSIAIAATMGVLFLGDTLYIGSVVGALIICIGFYAVMWGKAKEDEMSIEEEDSSMTRTTPFLQNH 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9379798 9382085 - Conep16aG0327900.1 Cone16ag0910 455344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0910 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 161 - -
Cone16ag0910 354 Pfam EamA-like transporter family 192 326 IPR000620 GO:0016020(InterPro)
Cone16ag0910 354 Pfam EamA-like transporter family 22 158 IPR000620 GO:0016020(InterPro)
Cone16ag0910 354 PANTHER WAT1-RELATED PROTEIN 15 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone16ag0910 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0910 Cone-Chr16:9379798 Cone2ag0146 Cone-Chr2:765602 5.46E-210 dispersed
Cone16ag0909 Cone-Chr16:9376894 Cone16ag0910 Cone-Chr16:9379798 4.88E-194 tandem
Cone16ag0910 Cone-Chr16:9379798 Cone16ag0911 Cone-Chr16:9382213 1.65E-78 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0910 - - - 0.0