Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0914 ATGGATTTAGAGAGTGTAGTTTCTGCTCAGAGATACAAGAAGGATTCATGGAAGACTGTGTTAACTCTAGCTTTTCAGAGCTTAGGAGTTGTCTATGGTGATTTAAGCACTTCTCCTTTGTATGTGTACAAAAGTGCTTTTGCAGAGGATATACAACATTCAGAAACGAATGAGGAGATTTATGGTGTTCTCTCCTTTGTATTTTGGACTCTAACTCTAATTCCCTTGCTTAAATATGTATTCATTGTGCTTAAAGCTGATGATAATGGAGAAGGAGGAACTTTTGCTCTGTATTCATTGCTATGCCGCCATGTTAGAGTTAGCTTCTTACCTAATTGTCAGCTTGCTGATGAGGAGCTGTCTGATTATACTAAAGATGGGCATGAGTTGAGTGGTAAGAGCTCTTGTGGGTCCAGTTTGAAATCCAGTTTGGAGAAGTATAAAGTGCTGCAAAGAGTGCTGCTTGTTCTTGCTTTGATTGGAGCTTGTATGGTTATAGGAGACGGAGTTCTTACTCCTGCACTTTCTGTTTTTTCAGCTGTTTCCGGGCTTGAGCTTTCTATGTCTAAAGATCATCATAGATATGTTGAAGTTCCGGTCGCTTGCTTCATACTGATATGCTTGTTCGCCCTACAACATTATGGGACCCACCGTGTAGGATTCCTATTTGCACCTATTGTCATTACATGGCTTTTATGCATAAGCGCAATTGGTGTCTATAACATCTTCCATTGGAATCCCTCTGTCTATCAAGCACTCTCTCCTTACTACATGTTTAAGTTTTTGAAGAAGACTCAAAGGGGCGGTTGGATGGCCTTAGGGGGGATCTTATTGTGTATGACAGGCTCGGAAGCGATGTTTGCTGATCTTGGACACTTTTCACAGCTGTCCATTAAGATTGCTTTTACTTTTGTGGTATATCCTTCCTTAGTTTTAGCATATATGGGACAAGCTGCTTATCTTTCTAAACATCACATTATTGAAAGCAATTACAGAATCGGATTCTATGTTTCTGTTCCGGAGAAGATAAGATGGCCGGTTTTGGCAATAGCCATACTTGCTGCAGTAGTTGGGAGTCAAGCCATTATTACCGGAACTTTCTCAATAATCAAGCAGTGCTCGGCGTTAGGTTGTTTTCCGAGGGTGAAAATTATCCATACTTCGTCGAAAATACACGGCCAAATCTACATTCCGGAGATTAATTGGACCTTAATGTTTATATGCTTGGCTGTTACTATCGGCTTTAGAGACACGAAACATATGGGCAATGCATCAGGTTTGGCTGTAATAACTGTCATGCTAGTCACCACATGCCTAATGTCTCTAGTTATTATCCTATGTTGGCATAAAAATTTGTTCCTAGCCATTGCTTTCATGCTACTCTTCGGCTCGCTAGAAGCACTCTACTTTTCAGCTTCTCTCATTAAGTTCAAGGACGGAGCGTGGGTCCCAATCGCGCTTTCCTTAATCTTTCTACTAATCATGTATGTCTGGCACTATGGTACTCTTAAAAAATATGACTATGACGTCCAAAACAAGGTCTCAATCAACTGGCTCCTTAGCCTTGGCTCCAATCTGGGGATTGTTCGTGTCCGAGGAATTGGACTTATACATACGGAGCTTGTGAATGGAATCCCAGGAATATTCTCTCATTTCGTAACAAACCTTCCGGCTTTCCACCAAATCGTAGTCTTCCTCTGCATCAAATCTGTCCCTGTGCCTCATGTAAGGCCGGAGGAAAGATTCTTAGTGGGAAGAGTGGGCCCCAAGGAGTACCGGCTTTACCGGTGTATAGCCCGGTATGGTTATCGGGATTTTCAAAGAGATGACTTGGAGTTTGAAAAGGACCTTGTTTGTAGCATTGCGGAATTTATACGGTCGGAAAGGCCTGAATCCGACAATGGGAAGAAAGAAGTTGAAGATAATGAGAAAATGACCGTTATTGGAACATCCTCATCGAATTCGGAAGGTGTAAGAATTTGTGAAGATGATTCGGACGGGGTAAGGGAGGTGGAGTCAAAGTCTCCAGAAAAACCGAGGAAAAGGGTGCGGTTTCTCCTTCCGGAAAGTCCGAAAGAAATGGGGATTGACGCGAGGGAAGAATTGAAGGAGTTGATGGAAGCAAGGGAGGCGGGGATGACGTTCATAATGGGTCATTCGTTTGTGAGGGTGAAGAGGGGTTCGGGTTTGATCAAGAAGATTGTGATTAATTATGTGTATGATTTCTTGAGGAGGAATTCTAGGGGTTTGATTTATGCTTTGAGCTTTCCTCAGGCTTCTACTCTTGAAGTAGGCATGGTTTACCATGTCTAA 2313 42.33 MDLESVVSAQRYKKDSWKTVLTLAFQSLGVVYGDLSTSPLYVYKSAFAEDIQHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLKADDNGEGGTFALYSLLCRHVRVSFLPNCQLADEELSDYTKDGHELSGKSSCGSSLKSSLEKYKVLQRVLLVLALIGACMVIGDGVLTPALSVFSAVSGLELSMSKDHHRYVEVPVACFILICLFALQHYGTHRVGFLFAPIVITWLLCISAIGVYNIFHWNPSVYQALSPYYMFKFLKKTQRGGWMALGGILLCMTGSEAMFADLGHFSQLSIKIAFTFVVYPSLVLAYMGQAAYLSKHHIIESNYRIGFYVSVPEKIRWPVLAIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMFICLAVTIGFRDTKHMGNASGLAVITVMLVTTCLMSLVIILCWHKNLFLAIAFMLLFGSLEALYFSASLIKFKDGAWVPIALSLIFLLIMYVWHYGTLKKYDYDVQNKVSINWLLSLGSNLGIVRVRGIGLIHTELVNGIPGIFSHFVTNLPAFHQIVVFLCIKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDFQRDDLEFEKDLVCSIAEFIRSERPESDNGKKEVEDNEKMTVIGTSSSNSEGVRICEDDSDGVREVESKSPEKPRKRVRFLLPESPKEMGIDAREELKELMEAREAGMTFIMGHSFVRVKRGSGLIKKIVINYVYDFLRRNSRGLIYALSFPQASTLEVGMVYHV 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9393558 9397043 - Conep16aG0328300.1 Cone16ag0914 455348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0914 770 Pfam K+ potassium transporter integral membrane domain 23 520 IPR053951 -
Cone16ag0914 770 NCBIfam potassium uptake protein 23 770 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone16ag0914 770 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 770 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cone16ag0914 770 Pfam K+ potassium transporter C-terminal domain 533 769 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0273 Cone-Chr12:1472244 Cone16ag0914 Cone-Chr16:9393558 9.50E-229 dispersed
Cone16ag0914 Cone-Chr16:9393558 Cone5ag0147 Cone-Chr5:624725 0 dispersed
Cone11ag0124 Cone-Chr11:557052 Cone16ag0914 Cone-Chr16:9393558 0 wgd
Cone13ag1030 Cone-Chr13:8573063 Cone16ag0914 Cone-Chr16:9393558 0 wgd
Cone16ag0914 Cone-Chr16:9393558 Cone19ag1020 Cone-Chr19:7621060 0 wgd
Cone16ag0914 Cone-Chr16:9393558 Cone2ag0141 Cone-Chr2:749211 0 wgd
Cone16ag0914 Cone-Chr16:9393558 Cone8ag0650 Cone-Chr8:6474351 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0914 K03549 - rcu:8280544 1285.4