Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone16ag0957 | ATGCAGGTTGGATTATTCTCCACTGATGTTCTACTAGCACTTCTTTTAGGACAACTACTCTTTGCTTGTCTTGTAAGAATCTTTGTAAAGCAAATTAAGCATTCAAACTTGCCTCGTGGAAGCATGGGATGGCCCTTTTTTGGTGAGACTCTTAGATTTCTCAAGCCTCATCGATCAAACTCCATTGGAAACTACTTGCAAGAACATTGTTCTAGGTATGGAAAGGTGTTCAAATCCCATCTGTTTGGGTCATCAGCCATAGTTTCCTGCAATCAAGAGCTCAACATGTTCATTCTTCAAAATGATGAGAAGCTATTCAAAGTCAGCTACCCTAAAGCCATGCATGGAATTCTTGGGAAGTTCTCTCTGATTCTAATCTCTGGAGATATTCACAAGAAGCTAAGAAACATCATCATCAGCTTCATAAGCTCATCTAAATCAACACCTAGCTTTCTTCAATCTGTAGAGAATCTTTCCATTTCAACCTTGGATTCATGGAAAAGCAAAAATCAAGTTCTTTTCTACAAAGAAGCTAAAATATTTGCACTTAATCTCATGGTGAAGCACCTATTAAGTATTGAGCCAAAGGATCCAATGGGCTCAAAGATATTACAAGAGTTTGAAACTTTCATGAAAGGTTTTGTTTCTTTACCCATCAATCTTCCTGGGACTGCATATGCCAAGGCTGTTAAGGCTAGAGCAAGGCTTTCAGAAACTGTCAAAGGGATCATGGAAGAGAGGGAAGTAAAAAGGAGGTCAGGGATTGGACATGATGAGGGAGATCAAGACTTCTTAGATGTGATTCTGTCAAAGTGGAGGCTAAGTAATGCAGAGAGAGTGAGCATTGTGTTGGACATATTGCTAGGAGGCTATGAAACAACTGCAACACTTATGGCCTTGGCTGTCTACTTCTTGACTCATGCTCCAAATGCTTTTGCAAAACTTAAGGAAGAACACCAAGAAATAAGAAGTGGTAAGAAGAAAGGAGAACCCTTGAATTCGGAAGATTATAAGCACATGGAATTCACCCATAATGTAATCTTTGAAGCAATGAGATGTGGAAATGTAGTCAAGTTTCTGCATAGAGAAGCTCTTACTGATGTCAAATTCAGAGAGATTTACATCCCTTCAGGATGGAAAGTTCTTCCCGTCTTTACAGCGGTTCATCTTGATCCATCACTCCATTTGAATCCTCAACAGTTTGATCCATGGAGATGGGCTGATAAAGAATTGATGAGCAAGAAAGTGACTCCGTTTGGAGGTGGACCACGGCTTTGTCCAGGAGCCGAACTTGCTAAAGTAGAGATAGCATTCTTTCTTCATCATCTTGTCCTTAATTATAGGTGGAAAGCACAAGTAGATGAAGTTCCTCTTGCTTACCCATTTGTTAAATTCCAGAAAGACTTGCTGTTAGAGATTGAGCCTCTTCAAGACTAA | 1437 | 39.74 | MQVGLFSTDVLLALLLGQLLFACLVRIFVKQIKHSNLPRGSMGWPFFGETLRFLKPHRSNSIGNYLQEHCSRYGKVFKSHLFGSSAIVSCNQELNMFILQNDEKLFKVSYPKAMHGILGKFSLILISGDIHKKLRNIIISFISSSKSTPSFLQSVENLSISTLDSWKSKNQVLFYKEAKIFALNLMVKHLLSIEPKDPMGSKILQEFETFMKGFVSLPINLPGTAYAKAVKARARLSETVKGIMEEREVKRRSGIGHDEGDQDFLDVILSKWRLSNAERVSIVLDILLGGYETTATLMALAVYFLTHAPNAFAKLKEEHQEIRSGKKKGEPLNSEDYKHMEFTHNVIFEAMRCGNVVKFLHREALTDVKFREIYIPSGWKVLPVFTAVHLDPSLHLNPQQFDPWRWADKELMSKKVTPFGGGPRLCPGAELAKVEIAFFLHHLVLNYRWKAQVDEVPLAYPFVKFQKDLLLEIEPLQD | 478 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 9623590 | 9625998 | - | Conep16aG0332700.1 | Cone16ag0957 | 455391 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone16ag0957 | 478 | CDD | CYP90-like | 69 | 475 | - | - | |
| Cone16ag0957 | 478 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 419 | 428 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone16ag0957 | 478 | SUPERFAMILY | Cytochrome P450 | 32 | 472 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | Gene3D | Cytochrome P450 | 28 | 470 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | E-class P450 group I signature | 384 | 408 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | E-class P450 group I signature | 426 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | E-class P450 group I signature | 278 | 295 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | E-class P450 group I signature | 298 | 324 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | E-class P450 group I signature | 416 | 426 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PANTHER | CYTOCHROME P450 26 | 36 | 452 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cone16ag0957 | 478 | Pfam | Cytochrome P450 | 38 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | P450 superfamily signature | 345 | 356 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | P450 superfamily signature | 417 | 426 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | P450 superfamily signature | 426 | 437 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | PRINTS | P450 superfamily signature | 289 | 306 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0957 | 478 | FunFam | Cytochrome P450 724B1 | 32 | 474 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0957 | Cone-Chr16:9623590 | Cone1ag1219 | Cone-Chr1:55977119 | 3.39E-98 | dispersed | |
| Cone8ag0806 | Cone-Chr8:8116467 | Cone16ag0957 | Cone-Chr16:9623590 | 4.91E-130 | transposed | |
| Cone13ag0178 | Cone-Chr13:1089425 | Cone16ag0957 | Cone-Chr16:9623590 | 9.79E-14 | wgd | |
| Cone16ag0957 | Cone-Chr16:9623590 | Cone19ag0174 | Cone-Chr19:1011523 | 2.53E-18 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone16ag0957 | K12639 | - | rcu:8260354 | 615.15 |