Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0994 ATGACTACGTACTGGTGGAGGGCATTACTTGTTGCTACAATTTTGTTGTATTTGGGCACAGGGGAAGGCATTTTGGTGACGAATTTCTACAGCTCTACTTGTCGAAATGTAGAACAAATCGTAAGGCAAGCTGTACAGGAGAAGATAAACCAGACATTCGTCACTGTCCCGGCAACTCTTCGCCTTTTCTTCCATGACTGTTTTGTCGAGGGATGTGATGCTTCGGTCATGATTGCTAATGCAAATGGAGATGCAGACAAGGATGCACCGGATAATATTTCTTTGGCCGGAGATGGGTTCGATACAGTTCTCCACGCTAAGAAGGCAGTTGAATCAGCCTGTCCGGGCGTCGTTTCTTGTGCTGACATCTTGGCCATTGCTGCAAGAGACGTCGTCTTTCTTGCTGGAGGCCCGAATTTCACCGTGGAATTGGGCCGTCTGGACGGGCTAATCTCGAATGCATCTTCGGTCTCTGGAAATCTACCTGGACCAGCCTTCAACCTCACTCAACTTAACGCCATCTTCGCCAGAAACAACCTCACCCAAACAGACATGATAGCCCTCTCTGGGGCCCATACCCTCGGATTCTCTCATTGCAGTCGCTTTTCAAACCGCCTTTATAACTTCTCTGATTCCGCTTCCGTCGATCCCTCTCTGGATCCAAATTATGCTCAACAACTTATGCAAGCTTGCCCTCAAGATGTGGACCCCAGAATCGCCATTAACATGGACCCTTTGACCCCACGGAGATTCGACAACGTATATTACCAGAATTTGGTCAACAAAATGGGGTTGTTTACTTCCGATGAAGTGCTTTTCACAGAAGCTGGTTCTCAGCCAACTGTGGTTGATTTTGCTAATAGTAAGAAGCACTTTAATTCCGCGTTTACGACGGCGATGAAGAAGCTTGGAAGGACTGGTGTTAAGACTGGTAGTTTGGGTGAGATAAGGTTAGACTGCACGGCCTTTAACTCATGA 978 47.34 MTTYWWRALLVATILLYLGTGEGILVTNFYSSTCRNVEQIVRQAVQEKINQTFVTVPATLRLFFHDCFVEGCDASVMIANANGDADKDAPDNISLAGDGFDTVLHAKKAVESACPGVVSCADILAIAARDVVFLAGGPNFTVELGRLDGLISNASSVSGNLPGPAFNLTQLNAIFARNNLTQTDMIALSGAHTLGFSHCSRFSNRLYNFSDSASVDPSLDPNYAQQLMQACPQDVDPRIAINMDPLTPRRFDNVYYQNLVNKMGLFTSDEVLFTEAGSQPTVVDFANSKKHFNSAFTTAMKKLGRTGVKTGSLGEIRLDCTAFNS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9762029 9766525 + Conep16aG0336500.1 Cone16ag0994 455428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0994 325 Pfam Peroxidase 41 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 Gene3D - 28 324 - -
Cone16ag0994 325 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 FunFam Peroxidase 162 303 - -
Cone16ag0994 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 Gene3D Peroxidase, domain 2 162 303 - -
Cone16ag0994 325 CDD secretory_peroxidase 25 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone16ag0994 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cone16ag0994 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0994 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cone16ag0994 325 FunFam Peroxidase 28 170 - -
Cone16ag0994 325 PANTHER - 11 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0994 Cone-Chr16:9762029 Cone2ag0044 Cone-Chr2:226794 3.61E-170 dispersed
Cone18ag1349 Cone-Chr18:9296612 Cone16ag0994 Cone-Chr16:9762029 9.74E-15 dispersed
Cone16ag0994 Cone-Chr16:9762029 Cone16ag0995 Cone-Chr16:9767612 4.28E-107 tandem
Cone11ag0046 Cone-Chr11:222204 Cone16ag0994 Cone-Chr16:9762029 2.18E-167 wgd
Cone16ag0994 Cone-Chr16:9762029 Cone2ag0043 Cone-Chr2:222942 2.83E-17 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0994 K00430 - vvi:100249751 476.092