Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0995 ATGGAAGGTGTCAAGATGTTGAGAAATATTGTTCTCGTAATAGTAGTAACTCTTAGTGTAATAAGGAGAGGCGAAGGGCAGCTAAGAGCAAATTTCTATGGCACAAGTTGTTTGAATGTTGAACAGATAGTTAATCAAGTCGTCCGAACAAAGCTTAGTGAGACGATCATCACGATCCCAGGATGTGATGGCTCGATCTTGATCGCATCACCCAATCAAGACGCTGAGAAGGATGCACCAGATAATCTTTCCTTAGCCGGAGACGGTTTTGACACTGTCATAAGGGCTAAGACTGCAGTTGAAGCCGCCTGCCCACGAGTGGTCTCATGTGCCGATATCTTGCCTATCGCTGCTCGAGATGTTGTCGTTCTAGTAGCCGGAAACCTGCCCGAACCAACCTTTGACCTAAACACGCTTACAACACTCTTTGCTCGAAACAATCTTACACAAACCGATTTGATTGCGCTCTCTGGAGCACATACAATAGGAGCTTCCCACTGTAATCGCTTTACAAACCGGTTATCTCCATTAGACCCTTCTATAGACCGGAATTATGCTCAACAATTGATTCAAGAATGCCCTCAGAATGTTCCCACTTTTGACAATGTTTACTATCAAAATCTTGTGAGTGGAAAGGGCTTGTTCACTTCGGATCAGGTTCTGTTTACCAATGCTGGGACTAGGCCTACTGTGAATAATTTTGCACAAAATTGGGGTCCTTTTAGTAGTGCTTTCGCAGCAGCAATGAAGAACCTTGGGCGGGTTGGAGTTAAGACAGGTAGATCGGGTGAGATTCGTAGAGACTGCACAGCTTTTAATTGA 822 44.53 MEGVKMLRNIVLVIVVTLSVIRRGEGQLRANFYGTSCLNVEQIVNQVVRTKLSETIITIPGCDGSILIASPNQDAEKDAPDNLSLAGDGFDTVIRAKTAVEAACPRVVSCADILPIAARDVVVLVAGNLPEPTFDLNTLTTLFARNNLTQTDLIALSGAHTIGASHCNRFTNRLSPLDPSIDRNYAQQLIQECPQNVPTFDNVYYQNLVSGKGLFTSDQVLFTNAGTRPTVNNFAQNWGPFSSAFAAAMKNLGRVGVKTGRSGEIRRDCTAFN 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9767612 9768686 + Conep16aG0336600.1 Cone16ag0995 455429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0995 273 PRINTS Plant peroxidase signature 207 224 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 PRINTS Plant peroxidase signature 191 206 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 PRINTS Plant peroxidase signature 247 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 ProSiteProfiles Plant heme peroxidase family profile. 27 273 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 Pfam Peroxidase 127 237 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 Gene3D - 127 269 - -
Cone16ag0995 273 Gene3D Peroxidase, domain 2 131 253 - -
Cone16ag0995 273 PANTHER - 125 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 FunFam Peroxidase 130 252 - -
Cone16ag0995 273 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 Gene3D - 31 126 - -
Cone16ag0995 273 CDD secretory_peroxidase 27 272 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone16ag0995 273 SUPERFAMILY Heme-dependent peroxidases 27 273 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0995 273 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0995 Cone-Chr16:9767612 Cone2ag0044 Cone-Chr2:226794 2.74E-93 dispersed
Cone16ag0994 Cone-Chr16:9762029 Cone16ag0995 Cone-Chr16:9767612 4.28E-107 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0995 K00430 - cit:102612835 342.428