Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag1017 ATGGAGAAGAACCAGAGTGAGAACCAGAACCTTCCTGAAGACGAAGGCAAAGCTGGCGGTGACAACGCCAATGCGCCTGTAATTGATCACAAGGAGGAGGTTGACAATGCGGATCAGGCAGGTGTGAAATTGCTGGAGAAAGAGGCTGAGAATAAACAGGATCAGGAGGAGACAAAGGAGAAGAAGGTGGAAGAGACCGAGGCTGTTCCTGAACCTCCTATCAGCCTGGAGAAGGTCTCTGAAGATATTGATCAGTTTCTATTATCTCTGCCACTTCCTCTTCCCCAGGGCGAAGACGGTAACGTAGCAGATCATGTGGAATGCGGTCGATTCGTTGACATATTCTTGGATCTTGCGGAGGTAATGATTACTGATTACGAAGCTGGCAATACGAAATTGTGGCAAGCGCCGGAGAAGGATTCTTGTTTTCTGGAAGCCACGCATCGGATGTCAAGCCTGAATGAAACGCTCCGTACACTGAAATTGGCTGAGAATCAAATATCCTTGATTAACCGCACGGGACGCAGTCAACAGAGAGTAATGGCATATTTGGAAGAAGAATTCAGGCTTCTTCTGGAAGAATCCAAAAGCAACGATGCAGACCACTGCCCCATTGATACGAAAGGGAAGCATGAACAGGACCGCAACTCATTGCCGGAAAATGAATCCACCGAAGATGAGATCGACTTTCAGGGATACTCGGACGATGTCGTTTCCTGTATGAATAAAATAGCCAAAGAAATGATATACGCTGGATTTGAATCAGAGTGCTGTCAGGTTTACACCATCTCGAGGAGGAACGCGCTCGAGGAGATGTTTCACAAACTGGAGTTTGAAAAACACAGCATAGACGACGTCCACAAGATGCATTGGGACGCATTGGAAAGAGAGATCATTACGTGGATCAAGACCTTCAAGCAATGCGCCACCGTCTGCTTCTCCGGCGAACACAAACTTGCTGAATCTGTGTTCTCAGACAATCCAGCAATCTCCTCCAGCCTCTTCAGCAATCTGACACGTGGCGGAGTCATACAGCTTCTCAATTTCGCAGAAGGAATCGCCATGACAAAACGCTCAGCGGAAAAGCTGTTCAAGATTCTGGACATGTACGAGACTCTGCGTGATATGGTTCCGAAAATGGACGGACTATTTGCAGATGAATGTGCAAATGAGCTGAAAACAGAGATCATGACGACTCGTTCCCGCCTTGGCGAGGGGGCGATTTACATTTTCTGTGATCTAGAAAACTCGATCAAAGCAGATTCAGGGAAGACTCCGGTTCCAGGTGGTGCGGTTCATCCTTTGACTCGGTACTTCATGAATTATCTAAAATACGCATGTGAGTACAAAGATACTCTGGAACAAGTTTTCAGAGAGCACTCGAAAATCGAACGTGAGGATTCGACGACCAGGCTACGCTTGGACCAACAACAAACTTCCGGGAACAATGATAATCAAAACAGAGCCCAATCGCCTTTTTCAGTACAGTTGATGAGGATGATGGAGCTGCTGGACTCAAATCTGGAGGTGAAATCAAAGCTGTACAGAGACGTGGCTCTGAGTTCCATATTCATGATGAACAATGGAAGGTACATCTTGCAGAAGATAAAGGGGTCGGCAGAGATCAACAGCTTGATGGGTGAAACCTGGTATAGAAAGAGATCATCTGATCTTAGGCAGTACCATAAGAACTACCAGAGAGAAACATGGGTAAGACTGTTGGGTTGTTTGAGCCTGGAAGGTTTGAATGTGAATGGGAAAGTAGTGAAGCCAGTACTGAAAGAGAGGTTCAAGAGCTTCAACGCCATGTTCGAGGAGATCCACAAGACGCAGAGCTCATGGATTGTGAGTGACGAGCAGCTTCAGTCGGAGCTGCGCGTTTCGATCTCAGCAGTGGTGATTCCGGCTTACAGGTCCTTCTTAGGGAGATTCTCTCAGTACTTGGATCCAGGAAGACAAACAGAGAAGTACATAAAGTTTCAGCCTGACGATATAGAAACCTATATAGAAGAGCTCTTTGATGGAAGTGCCGCTCCGTCTAGTACAAGGAGGAAACCATAA 2061 46.68 MEKNQSENQNLPEDEGKAGGDNANAPVIDHKEEVDNADQAGVKLLEKEAENKQDQEETKEKKVEETEAVPEPPISLEKVSEDIDQFLLSLPLPLPQGEDGNVADHVECGRFVDIFLDLAEVMITDYEAGNTKLWQAPEKDSCFLEATHRMSSLNETLRTLKLAENQISLINRTGRSQQRVMAYLEEEFRLLLEESKSNDADHCPIDTKGKHEQDRNSLPENESTEDEIDFQGYSDDVVSCMNKIAKEMIYAGFESECCQVYTISRRNALEEMFHKLEFEKHSIDDVHKMHWDALEREIITWIKTFKQCATVCFSGEHKLAESVFSDNPAISSSLFSNLTRGGVIQLLNFAEGIAMTKRSAEKLFKILDMYETLRDMVPKMDGLFADECANELKTEIMTTRSRLGEGAIYIFCDLENSIKADSGKTPVPGGAVHPLTRYFMNYLKYACEYKDTLEQVFREHSKIEREDSTTRLRLDQQQTSGNNDNQNRAQSPFSVQLMRMMELLDSNLEVKSKLYRDVALSSIFMMNNGRYILQKIKGSAEINSLMGETWYRKRSSDLRQYHKNYQRETWVRLLGCLSLEGLNVNGKVVKPVLKERFKSFNAMFEEIHKTQSSWIVSDEQLQSELRVSISAVVIPAYRSFLGRFSQYLDPGRQTEKYIKFQPDDIETYIEELFDGSAAPSSTRRKP 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9851808 9853868 - Conep16aG0339000.1 Cone16ag1017 455451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag1017 686 MobiDBLite consensus disorder prediction 200 226 - -
Cone16ag1017 686 MobiDBLite consensus disorder prediction 1 74 - -
Cone16ag1017 686 Gene3D Exocyst complex component Exo70 130 683 - -
Cone16ag1017 686 FunFam Exocyst subunit Exo70 family protein 127 681 - -
Cone16ag1017 686 MobiDBLite consensus disorder prediction 26 68 - -
Cone16ag1017 686 PANTHER EXOCYST COMPLEX PROTEIN EXO70 114 676 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone16ag1017 686 MobiDBLite consensus disorder prediction 200 222 - -
Cone16ag1017 686 Pfam Exo70 exocyst complex subunit C-terminal 300 671 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone16ag1017 686 MobiDBLite consensus disorder prediction 467 489 - -
Cone16ag1017 686 Coils Coil 42 69 - -
Cone16ag1017 686 MobiDBLite consensus disorder prediction 473 489 - -
Cone16ag1017 686 SUPERFAMILY Cullin repeat-like 140 674 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag1017 Cone-Chr16:9851808 Cone1ag0768 Cone-Chr1:53788018 5.17E-115 dispersed
Cone6ag1242 Cone-Chr6:9899471 Cone16ag1017 Cone-Chr16:9851808 2.81E-176 transposed
Cone16ag1017 Cone-Chr16:9851808 Cone2ag0024 Cone-Chr2:154176 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag1017 K07195 - csv:101206040 805.823