Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone17ag0021 | ATGACATCTCGTGGTTCTTCCGCCTCTACCAATGGCTTGTTGACGGTTTCCACATCCGGAAGGCGACAGGACATGGAGACTGGTCAAGATTCCGGTAGGCAACTCCCTGACGATGGAGAAGATCGCTCTTCCTCTGTTTCTGATCCCTTCGATATTGAAAATACCAAGAATGCGCCATTGTCTTCCCTCAAGCGCTGGCGGCAAGCGGCACTGGTGCTGAATGCATCTCGAAGGTTCCGATACACTTTGGACTTGAAGGAGGAGGAAATAGAACAGAGAAGGAGGATGCTTAGAGCCCATGCACAAGTCATAAGAGCAGCATTGCTTTTCAAATTGGCTGGGGAACGGCAAATTGATTCATCAGTATCATTTCCTCCAAGTGCAAAGGGTGATTATGAAATTGGACAAGACCAGCTTGCTTCATTGACCAGGGAACAAAATTTTTCTGCACTACAAGAATATGGAGGGGTTAAAGGATTATCAAACTTGTTAAAAACAAACCTAGACAAGGGAATTATCGGCGATGAAACTGATTTAGTGAAGAGGAAGGATGCCTTTGGATCCAATACCTATCCTCGTAAAAAGGGGCGGAGTTTCTGGCGATTCCTATGGGAAGCTTGGCAAGATTTGACCCTCATCATCTTGATTATAGCTGCTGTCCTGTCATTGGTGTTGGGAATTAAAACAGAGGGTTTGGAAGAAGGATGGTATGATGGCGGAAGTATTACGTTTGCTGTTGCTTTAGTCATCGTAGTTACAGCTGTTAGTGATTACCGACAATCTCTTCAGTTTCAAAATCTAAATGAGGAAAAGCAAAACATACAATTGGAGATTTTGAGAGATGGTAGAACTGTAAAAGTCTCAATATTTGATATAGTTGTTGGTGATGTTGTGCCTCTTAATATTGGTGACCAGGTCCCTGCCGATGGAATCTTGATCACTGGTCATTCACTAGCCATTGATGAATCTAGTATGACAGGGGAGAGCAAGATTGTTCACAAGGATCAGAAAACACCTTTTCTGATGTCTGGTTGCAAAGTGGCTGATGGAGTTGGTACAATGCTGGTAACTGGTGTTGGCATCAATACAGAATGGGGATTGTTGATGGCGAGTATCTCAGAGGATACTGGTGAAGAAACTCCCTTGCAGGTACGCCTGAATGGAGTTGCAACGTTTATAGGAATAGTTGGGCTTACTGTTGCTGTTTCTGTACTAGCAATCCTTTTTGGAAGATACTTTACTGGACACACAAAAAATGCGGATGGAACAGTGCAATTTGATGCTGGCAAGACTAAACTGAGCACTGCTTTCAATGGAGCCATCAGCATTGTTACTGTTGCAGTCACCATTGTGGTTGTTGCAGTGCCAGAAGGGCTTCCTTTGGCTGTTACCCTGACTCTAGCATACTCTATGCGGAAAATGATGGCAGATAAGGCTCTCGTTCGTAGGCTGTCTGCCTGTGAAACGATGGGCTCTGCAACAACAATTTGCAGTGATAAGACTGGAACATTGACTTTGAATCAGATGACTGTGGTTGAGGCATATGTTGGAAAAAAGAAGATTAGCTCACTAGATGACTCCTCGCAGTTGCATCCATCTGTGTTGGCTCTGCTTTGTGAGGGGATTTCTCAGAATACCACTGGCAATGTTTTTGTTCCTAAAGATGGAGGAGATGTAGAGATTTCTGGATCTCCCACCGAGAAAGCTATTCTATCTTGGGCTGTCAAGTTGGGGATGAAGTTTGATATAGTCAGATCAAAGGCTAAAGTACTCCATGTTTTTCCTTTCAACTCGGAGAAAAAGAAAGGAGGTGTTGCTTTAAAACGGGCTGACTCAGAAGTTTATATACATTGGAAGGGAGCAGCCGAGATCATTTTGTCCTCATGTAAAGGATATCTTGATTTGCATGGTGACTTTCAATCCATCGATGAAGATAAGGAATTTTTAAAGTCATCTATTGATGACATGGCTGCTAGCAGCTTGCGGTGTGTTGCCATTGCATACAGATCCTATGAAGCAGGGAATGTTCCTACAGATGAGGAGCATTTGGATCAATGGAAGTTGCCTGAAGATGACCTTGTTCTACTTGGTATCGTAGGTATAAAGGATCCTTGTCGGCCTGGCGTTAAACATGCAGTGAAAGTATGCACTGATGCTGGTGTTAAGGTGCGCATGGTCACAGGAGACAATCTGCAAACAGCTAAAGCAATAGCCTTGGAGTGTGGGATACTCAATTCCATTGAAGATGCTACTGAACCTAATATCATTGAAGGAAAAGTATTTCGTGAACTATCTGAAAAGGAAAGAGAACAAATTGCCAAAAAAATAACGGTAATGGGTAGGTCTTCTCCTAATGACAAGCTTTTACTTGTACAAGCACTCCGAAAGGGGGGAGAAGTTGTTGCAGTGACTGGAGATGGTACTAATGATGCTCCTGCTCTTCATGAGGCAGATATTGGTCTTTCTATGGGCATTCAGGGAACTGAAGTTGCAAAAGAAAGTTCAGATATTGTAATCTTGGATGATAACTTTGCTTCAGTTGTAAAGGTTGTACGTTGGGGGCGTTCTGTGTTTGCAAATATTCAGAAATTCATCCAGTTCCAGCTTACAGTCAATGTTGCAGCTCTTGTAATTAATGTCGTGGCAGCAATATCCTCTGGGGATGTTCCTTTGAATACCGTACAGCTTCTGTGGGTCAACCTGATCATGGACACACTTGGCGCACTAGCTTTGGCTACTGAACCCCCAACAGACGAACTAATGCGTAAATTACCAGTTGGCCGAAGGGAACCTCTTATAACTAATATAATGTGGAGGAACTTGCTCATACAGGCTTTATATCAAGTTGCTGTCCTCCTTGTTCTTAATTTCCGTGGATTGGATCTTCTTCATTTGAATAATGAGAGCATAGAACATGCTTCTGATGTCAAGAATACTGTAATATTCAACACGTTTGTCCTCTGTCAATTATTCAACGAGTTTAATGCTCGGAAGCCAGAGGAATTAAATGTTTTCACCGGAGTGACCAAAAATCATCTCTTTTTGGGAGTGATTGGAATCACGGCTGTACTTCAGGTTATCATCGTTGAATTTCTCGGAAAGTTTACAAAAACAGTAAAACTCAACTGGGTGCAATGGCTTGTTTCCATCGGTATTGGTGTTGTCAGTTGGCCTCTGGCTGTAGTCGGAAAGCTCATTCCGGTTCCCAAGACACCGGTAGCCAAGTACTTCGTAAAGCCTATTCAACGATTCAGAAGGGCTCGTAATGCTTAA | 3273 | 43.02 | MTSRGSSASTNGLLTVSTSGRRQDMETGQDSGRQLPDDGEDRSSSVSDPFDIENTKNAPLSSLKRWRQAALVLNASRRFRYTLDLKEEEIEQRRRMLRAHAQVIRAALLFKLAGERQIDSSVSFPPSAKGDYEIGQDQLASLTREQNFSALQEYGGVKGLSNLLKTNLDKGIIGDETDLVKRKDAFGSNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAVLSLVLGIKTEGLEEGWYDGGSITFAVALVIVVTAVSDYRQSLQFQNLNEEKQNIQLEILRDGRTVKVSIFDIVVGDVVPLNIGDQVPADGILITGHSLAIDESSMTGESKIVHKDQKTPFLMSGCKVADGVGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVSVLAILFGRYFTGHTKNADGTVQFDAGKTKLSTAFNGAISIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGKKKISSLDDSSQLHPSVLALLCEGISQNTTGNVFVPKDGGDVEISGSPTEKAILSWAVKLGMKFDIVRSKAKVLHVFPFNSEKKKGGVALKRADSEVYIHWKGAAEIILSSCKGYLDLHGDFQSIDEDKEFLKSSIDDMAASSLRCVAIAYRSYEAGNVPTDEEHLDQWKLPEDDLVLLGIVGIKDPCRPGVKHAVKVCTDAGVKVRMVTGDNLQTAKAIALECGILNSIEDATEPNIIEGKVFRELSEKEREQIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDELMRKLPVGRREPLITNIMWRNLLIQALYQVAVLLVLNFRGLDLLHLNNESIEHASDVKNTVIFNTFVLCQLFNEFNARKPEELNVFTGVTKNHLFLGVIGITAVLQVIIVEFLGKFTKTVKLNWVQWLVSIGIGVVSWPLAVVGKLIPVPKTPVAKYFVKPIQRFRRARNA | 1090 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 157509 | 168163 | - | Conep17aG0002100.1 | Cone17ag0021 | 455498 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone17ag0021 | 1090 | Pfam | E1-E2 ATPase | 275 | 475 | - | - | |
| Cone17ag0021 | 1090 | FunFam | Calcium-transporting ATPase | 253 | 373 | - | - | |
| Cone17ag0021 | 1090 | FunFam | Calcium-transporting ATPase | 507 | 704 | - | - | |
| Cone17ag0021 | 1090 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 499 | 505 | IPR018303 | - | |
| Cone17ag0021 | 1090 | Gene3D | - | 60 | 112 | - | - | |
| Cone17ag0021 | 1090 | MobiDBLite | consensus disorder prediction | 26 | 47 | - | - | |
| Cone17ag0021 | 1090 | FunFam | Calcium-transporting ATPase | 697 | 849 | - | - | |
| Cone17ag0021 | 1090 | FunFam | Calcium-transporting ATPase | 205 | 262 | - | - | |
| Cone17ag0021 | 1090 | SFLD | p-type atpase | 479 | 856 | IPR044492 | - | |
| Cone17ag0021 | 1090 | SUPERFAMILY | Calcium ATPase, transduction domain A | 275 | 370 | IPR008250 | - | |
| Cone17ag0021 | 1090 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 154 | 1068 | IPR023298 | - | |
| Cone17ag0021 | 1090 | SMART | Cation_ATPase_N_a_2 | 156 | 227 | IPR004014 | - | |
| Cone17ag0021 | 1090 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
| Cone17ag0021 | 1090 | Gene3D | - | 507 | 704 | IPR023299 | GO:0000166(InterPro) | |
| Cone17ag0021 | 1090 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Cone17ag0021 | 1090 | PANTHER | CATION TRANSPORTING ATPASE | 120 | 1068 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Cone17ag0021 | 1090 | FunFam | Calcium-transporting ATPase | 58 | 113 | - | - | |
| Cone17ag0021 | 1090 | Gene3D | - | 494 | 849 | IPR023214 | - | |
| Cone17ag0021 | 1090 | Gene3D | - | 178 | 373 | - | - | |
| Cone17ag0021 | 1090 | Pfam | Cation transporting ATPase, C-terminus | 889 | 1065 | IPR006068 | - | |
| Cone17ag0021 | 1090 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 144 | 1068 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Cone17ag0021 | 1090 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 504 | 701 | IPR023299 | GO:0000166(InterPro) | |
| Cone17ag0021 | 1090 | FunFam | Calcium-transporting ATPase | 821 | 1070 | - | - | |
| Cone17ag0021 | 1090 | CDD | P-type_ATPase_Ca_PMCA-like | 181 | 937 | - | - | |
| Cone17ag0021 | 1090 | Pfam | Cation transporter/ATPase, N-terminus | 154 | 222 | IPR004014 | - | |
| Cone17ag0021 | 1090 | Pfam | haloacid dehalogenase-like hydrolase | 495 | 818 | - | - | |
| Cone17ag0021 | 1090 | NCBIfam | HAD-IC family P-type ATPase | 770 | 884 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone17ag0021 | 1090 | NCBIfam | HAD-IC family P-type ATPase | 437 | 526 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone17ag0021 | 1090 | Gene3D | - | 205 | 1057 | - | - | |
| Cone17ag0021 | 1090 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 351 | 521 | - | - | |
| Cone17ag0021 | 1090 | SFLD | C1.7: P-type atpase like | 479 | 856 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | P-type cation-transporting ATPase superfamily signature | 321 | 335 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | P-type cation-transporting ATPase superfamily signature | 697 | 708 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | P-type cation-transporting ATPase superfamily signature | 828 | 840 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | P-type cation-transporting ATPase superfamily signature | 497 | 511 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | P-type cation-transporting ATPase superfamily signature | 719 | 729 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | P-type cation-transporting ATPase superfamily signature | 804 | 823 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | Sodium/potassium-transporting ATPase signature | 616 | 634 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | Sodium/potassium-transporting ATPase signature | 876 | 897 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | Sodium/potassium-transporting ATPase signature | 240 | 260 | - | - | |
| Cone17ag0021 | 1090 | PRINTS | Sodium/potassium-transporting ATPase signature | 490 | 511 | - | - | |
| Cone17ag0021 | 1090 | SUPERFAMILY | HAD-like | 495 | 909 | IPR036412 | - | |
| Cone17ag0021 | 1090 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 48 | 88 | IPR024750 | GO:0005516(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag0678 | Cone-Chr10:3288120 | Cone17ag0021 | Cone-Chr17:157509 | 0 | dispersed | |
| Cone16ag0324 | Cone-Chr16:3989076 | Cone17ag0021 | Cone-Chr17:157509 | 0 | dispersed | |
| Cone17ag0021 | Cone-Chr17:157509 | Cone2ag0665 | Cone-Chr2:31727612 | 0 | dispersed | |
| Cone17ag0021 | Cone-Chr17:157509 | Cone20ag1385 | Cone-Chr20:8835107 | 1.33E-90 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone17ag0021 | K01537 | - | csv:101214801 | 1672.52 |