Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0039 ATGGCTCTTCTTGCGAGTCATCTCCTTACTCTCTTTCTCATCCCACTTCTCCTCTCCCATTCTTCTTCTTTGGCTAGTACTACTGATGTCAAGAAGACATTCATAGTTCAGGTCCATTTAGATGCCAAACCTTCTATTTTCCCAACCCATAAGCACTGGTACGAGTCCTCTCTCTCTTCCATATCATCCTCCGGAAAAAATACTTCGTCTGTTATTCACACTTACCACACTGTTTTCCACGGCTTCTCCGCCAAGCTCTCACCGTTCCAAGTCCAGAAGCTGCGAAACCTCCCCCACGTCATCTCCGTCATACCCGAACAGGTCCGCCACCTCCACACCACCCGCTCGCCGGAGTTCCTTGGTCTCAAAACCACCGACAGCGCTGGCCTCCTCAAAGAATCCGACTTCGGATCAGACCTCGTTATCGGAGTCATCGACACCGGCATCTGGCCGGAGCGACAGAGCTTCCACGATCGCGATCTGGGTCCCGTCCCGCCTAAATGGAAAGGCCAGTGTCTCGCTGGAAAAGACTTCCCTTCCACTTCCTGCAACCGCAAACTCATCGGAGCCAGATACTTCTGCGACGGTTACGAAGCAACCAACGGGAAGATGAACGAGACTACGGAATACCGTTCTCCGAGAGACTCCGACGGCCACGGGACCCACACCGCCTCGATCGCCGCCGGAAGGTACGTATTTCCAGCCTCAACTCTAGGATATGCTCGTGGCATGGCTGCTGGGATGGCTCCTAAGGCCCGTCTAGCCGCCTACAAAGTCTGCTGGAATGCTGGCTGCTACGACTCCGACATTCTCGCCGCCTTCGACGCCGCAGTATCCGACGGCGTCGACGTTGTCTCCCTTAGCGTCGGAGGTGTTGTGGTTCCCTACTACCTAGATTCTATAGCCATAGGTGCATTTGGAGCAGTAAATGCTGGAGTTTTTGTCTCTGCCTCGGCTGGAAACGGTGGGCCTGGTGGGCTCACGGTGACCAACGTGTCCCCATGGGTGACCACTGTCGGAGCCGGAACCATAGACCGAGATTTCCCAGCTGACGTCAAGCTAGGTAACGGAAAAACCATACCCGGAGTAAGCATCTATGGTGGGCCCGGATTGATTCCGGGTCGGTTGTATCCCGTTGTTTATGCAGGTACGGAAGGTGGGGATGGTTATTCCTCGTCTTTGTGTTTAGAAGGTTCATTAGACCCGACTTCTGTTAGAGGCAAAATCGTGGTGTGTGATAGAGGGATTAATTCAAGAGCTGCAAAAGGTGAGGTTGTGAAAAAAGCAGGTGGGATTGGAATGATATTAGCAAATGGAGTTTTTGATGGGGAAGGATTAATTGCTGATTGTCATGTTTTACCCGCCACCTCAGTTGGGGCAGCAAATGGGGACAAGATCCGGAGGTACATTACGGAAGCTTCTAAATCCCGGTCACCTCCAACTGCCATGATTGTGTTTAGAGGGACCCGCATTGGAGTCAGGCCCGCTCCAGTTGTGGCTTCTTTTTCGGCTAGAGGCCCTAACCCTGAATCCCCGGAAATATTGAAGCCAGATGTGATTGCACCCGGGTTGAACATTCTCGCTGCTTGGCCAGATAAAGTCGGCCCGTCCGGAATTCCTTCAGATAAACGCACGACAGAGTTCAATATTCTTTCGGGTACTTCAATGGCTTGCCCCCATGTTTCAGGCCTAGCTGCATTGTTGAAGGCGGCCCATCCGGAGTGGAGTCCTGCTGCGATAAAATCCGCTCTCATGACGACTGCTTATACGGTGGATAATAAAGGTATTACGGAAACAATGTTGGATGAATCGACCGGGAATGTTTCAACCGTGTTGGATTTTGGTTCGGGTCATGTTCACCCACAAAAGGCGATGGATCCAGGTCTAATCTACGATATAAGTGGATATGACTACATAGATTTCTTATGCAATTCGAATTATACAACAAAGAATATTCAAGTGGTTACGAGGAAGATTGCAGACTGTAGTGGGGCGAAAAGGGCGGGTCATTCTGGCAACTTGAATTACCCGTCATTATCCGTGGTGTTCCAACAATACGGGAAGCATAAGATGAATACACATTTCATTAGGACAGCAACCAATGTGGGTGAGCCGAGGTCGACTTACCGGGTGACAGTAAAGCCGCCAAGCGGGGTGGCAGTTACGGTGGAGCCAGAGAAGCTTGTGTTTAGGAGGGTGGGGCAGAAGTTGAACTTCTTGGTCAGGGTTCATGCCATGGCTCTAAAGCTTTCACCTGGAAGCTCTAGTATGAAGAGTGGTGCCATCGTTTGGTCAGACGGGAAGCACATGGTGACTAGTCCTTTGATTGTTACCATGCAACAACCTTTGGAGTAG 2355 51.08 MALLASHLLTLFLIPLLLSHSSSLASTTDVKKTFIVQVHLDAKPSIFPTHKHWYESSLSSISSSGKNTSSVIHTYHTVFHGFSAKLSPFQVQKLRNLPHVISVIPEQVRHLHTTRSPEFLGLKTTDSAGLLKESDFGSDLVIGVIDTGIWPERQSFHDRDLGPVPPKWKGQCLAGKDFPSTSCNRKLIGARYFCDGYEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGMAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDSIAIGAFGAVNAGVFVSASAGNGGPGGLTVTNVSPWVTTVGAGTIDRDFPADVKLGNGKTIPGVSIYGGPGLIPGRLYPVVYAGTEGGDGYSSSLCLEGSLDPTSVRGKIVVCDRGINSRAAKGEVVKKAGGIGMILANGVFDGEGLIADCHVLPATSVGAANGDKIRRYITEASKSRSPPTAMIVFRGTRIGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDKVGPSGIPSDKRTTEFNILSGTSMACPHVSGLAALLKAAHPEWSPAAIKSALMTTAYTVDNKGITETMLDESTGNVSTVLDFGSGHVHPQKAMDPGLIYDISGYDYIDFLCNSNYTTKNIQVVTRKIADCSGAKRAGHSGNLNYPSLSVVFQQYGKHKMNTHFIRTATNVGEPRSTYRVTVKPPSGVAVTVEPEKLVFRRVGQKLNFLVRVHAMALKLSPGSSSMKSGAIVWSDGKHMVTSPLIVTMQQPLE 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 246918 249866 + Conep17aG0003900.1 Cone17ag0039 455516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0039 784 SUPERFAMILY Subtilisin-like 111 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone17ag0039 784 Pfam Peptidase inhibitor I9 33 112 IPR010259 -
Cone17ag0039 784 ProSiteProfiles Serine proteases, subtilase domain profile. 116 625 - -
Cone17ag0039 784 FunFam Subtilisin-like protease SBT1.5 139 356 - -
Cone17ag0039 784 Gene3D Peptidase S8/S53 domain 139 638 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone17ag0039 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
Cone17ag0039 784 FunFam subtilisin-like protease SBT1.5 345 491 - -
Cone17ag0039 784 Gene3D - 345 492 - -
Cone17ag0039 784 SUPERFAMILY Protease propeptides/inhibitors 33 111 - -
Cone17ag0039 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Cone17ag0039 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 59 774 IPR045051 -
Cone17ag0039 784 SUPERFAMILY PA domain 400 473 IPR046450 -
Cone17ag0039 784 Pfam Subtilase family 137 606 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone17ag0039 784 Pfam Fibronectin type-III domain 673 777 IPR041469 -
Cone17ag0039 784 CDD PA_subtilisin_like 351 484 - -
Cone17ag0039 784 Pfam PA domain 377 466 IPR003137 -
Cone17ag0039 784 FunFam Subtilisin-like protease SBT1.9 22 112 - -
Cone17ag0039 784 CDD Peptidases_S8_3 110 589 IPR034197 -
Cone17ag0039 784 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cone17ag0039 784 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Cone17ag0039 784 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Cone17ag0039 784 Gene3D - 642 780 - -
Cone17ag0039 784 FunFam Subtilisin-like protease SBT1.5 642 780 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1227 Cone-Chr12:9526803 Cone17ag0039 Cone-Chr17:246918 1.61E-295 dispersed
Cone17ag0039 Cone-Chr17:246918 Cone8ag1278 Cone-Chr8:10541907 5.78E-300 dispersed
Cone17ag0039 Cone-Chr17:246918 Cone20ag1361 Cone-Chr20:8737502 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0039 - - - 0.0