Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0057 ATGGAGCCGTTGATGCCGCCTGAGGCCACGCAGATCATATTACGGTGGGATTCGACGGCGTCGGAGGAAGCTAGGGAGAGGATGATCTTCGAGGGTGACAGGGAGGAAGTCGATCGCTACTTACAGGCCGTGGATGAAATCCAACGCTCTATGTCGTCCGTTTCTATATCCGACGATCAGGCCAGAGTAAACACCACTCTGCAGATCGCCATGGCTCGACTGGAAGATGAATTTCGGACTATTCTCATTACTCACATCAATCCGATTGAGGCTGAGTCGCTGCTTGATCCGAGCTCCTCCACTCTCTCATCTTCCAATCTCGGAGGAGTATCCGAGGATGAAAATGAAGATGAATCTGTTGTGATCGGTAAGGGAGACGATCAGCTAAGTTGCATCGGTAGTCCGAGTTACAGGAAAAGTGGCCGATCAAGCTACCGATCAACGAGCAGCATCCGTGAGATCGATCTGATACCTTCCGATGCGATCACCGATCTCAGAAGTATCGCAGTGAGAATGATTTCAGCTGGATATTTGCGCGAGTGCATCCAAGTCTACGGCAGTGTCAGAAAGTCCACTTTCGATTTAAGCTTCCGCAGGCTTGGCGTCGAGAAACTGAGTATCGGAGATATTCAGAGGCTCGAGTGGGGGGAGCTGGAAACGAAGATCAGACGGTGGATTAGGGCTGCAAAAGTTTGTGTCAGGATTTTATTCGCAAGCGAGAAGAAGCTCTGTGAACAAATTTTCTACGGAATAGGCACCGCCATAGACGACGCTTGTTTCATGGAAACCGTTAAAGGTCCAGCAATTCAGCTATTTAACTTCGCGGAAGCTATCAGTATAAGTCGTAGATCACCTGAAAAACTGTTCAAGATTTTAGAACTACATGATGCGTTAATGGATATGACAGCTGATATAGACGCTGTATTCGAATCGAAATCAGCTGAATCGATCCGAGTTCAAGGGGCTGAGATCGTGTCGCGATTAGCAGAGGCTGTTAGGGGGATTTTATCAGAATTTGAGAACGCTGTGCTTTTAGAATCCTCCTTGGTCCCGGCGAATGGAACAATTCACCCCATGACCAAGTACGTAATGAACTACATCAGTCTTATGTGTGAATACAGACAGACCTTATTCGAGCTCATAGTCTCAAAACCATCAGCCGGGTCAAGGAATTCAGCTGATCTCTCAACCCCAGAATCGGAGATTCCAGAGGCAGAGGATAAAACACCATTAGAACTCCATTTCATTTGGATCATAGCCATTTTGCTATACAGTTTAGAAGGGAAGTCTAAGCACTTCAAAGATAGCTCCTTAATTCAACTGTTCATCATGAACAATGTTCACTACATCGTTTATAAGGTAAAAGGGTCGCCTGAAATGCGAGATATGATAGGAGACGATTATTTGAGGAAGCTTACCGGAAAATATCGTCAGGCAGCGACTAACTACCAGAGAGCCACTTGGGTCAGAGTATTGAATTGCTTAAGAGAAGAAGGTTTACATGTGAGTGGGAGTTTCTCTTCTGGAGTCTCAAAGAGTGTTTTGAGAGAGAGGTTTAAGGCCTTTAATGGTATGTTTGAGGAGGTTCATCGGACTCAATCGGCTTGGTTGGTTCCAGATTTTCAGCTTCGAGAGGAGCTACGCATATCTATAGCCGAAAAGTTGATTCCGGCTTATAGGTCGTTTCTAGGGAGGTCTAGACTTCAAATAGAGAGTGGGAAGCACCCAGAAAGTTTCATCAAGTACTCCTTTGAGGATTTAGAGAATGCTGTCTTGGATTTCTTCGAGGGTCACTCTGCTTCACTGTTATTAAGGAGGCGATCTCAATGA 1830 45.9 MEPLMPPEATQIILRWDSTASEEARERMIFEGDREEVDRYLQAVDEIQRSMSSVSISDDQARVNTTLQIAMARLEDEFRTILITHINPIEAESLLDPSSSTLSSSNLGGVSEDENEDESVVIGKGDDQLSCIGSPSYRKSGRSSYRSTSSIREIDLIPSDAITDLRSIAVRMISAGYLRECIQVYGSVRKSTFDLSFRRLGVEKLSIGDIQRLEWGELETKIRRWIRAAKVCVRILFASEKKLCEQIFYGIGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILELHDALMDMTADIDAVFESKSAESIRVQGAEIVSRLAEAVRGILSEFENAVLLESSLVPANGTIHPMTKYVMNYISLMCEYRQTLFELIVSKPSAGSRNSADLSTPESEIPEAEDKTPLELHFIWIIAILLYSLEGKSKHFKDSSLIQLFIMNNVHYIVYKVKGSPEMRDMIGDDYLRKLTGKYRQAATNYQRATWVRVLNCLREEGLHVSGSFSSGVSKSVLRERFKAFNGMFEEVHRTQSAWLVPDFQLREELRISIAEKLIPAYRSFLGRSRLQIESGKHPESFIKYSFEDLENAVLDFFEGHSASLLLRRRSQ 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 321235 323349 + Conep17aG0005700.1 Cone17ag0057 455534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0057 609 Pfam Exo70 exocyst complex subunit C-terminal 224 592 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone17ag0057 609 MobiDBLite consensus disorder prediction 95 110 - -
Cone17ag0057 609 SUPERFAMILY Cullin repeat-like 23 596 IPR016159 -
Cone17ag0057 609 MobiDBLite consensus disorder prediction 95 120 - -
Cone17ag0057 609 Pfam Exocyst complex component Exo70 N-terminal 9 83 - -
Cone17ag0057 609 Gene3D Exocyst complex component Exo70 12 603 - -
Cone17ag0057 609 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 597 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0057 Cone-Chr17:321235 Cone19ag0206 Cone-Chr19:1303296 2.08E-135 dispersed
Cone17ag0057 Cone-Chr17:321235 Cone20ag1348 Cone-Chr20:8666061 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0057 K07195 - rcu:8279032 850.892