Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0065 ATGGTCATGGCTAGATCTTCCATCTTCTTCGTTCTGTTTCTCTGTCTCTTTCCGGCCATAACACTTTCCCGCTCCTCCGACTCATCGGACCGTCCACGGACCTTCATCGTCCACGTGTCCAAATCACAAAAGCCGCACCTCTTCTCATCCCACCACCACTGGTACACCTCCATCATCAAATCCCTCCCTTCTTCCCCACATGGCCCCACCAAGTTCCTCTACTCCTACAACCTCGCCGTCAATGGCTTCTCCGCAACCCTCACCGCTGCTCAGGCCGAAAAGCTCCGGGACCTTCCCGGAATCGTCTCAGTGGTTCCCGATGAGATCCGTCACCTTCACACCACCCACACCCCTCATTTTTTAGGCCTCGCCGATACTTACGGCCTCTGGCCAAACTCCAACTACGCCGATGACGTCATAATCGGAGTACTCGACACCGGAATCTGGCCGGAACGCCCTAGCTTCTCCGACTCCGGCTTATCTGACGTACCGTCCAGCTGGAAAGGCACCTGCGAAACTAGCAGTTCCTTCCCGAGATGTAACAGAAAAATCATCGGAGCCAGAGCTTTCTACAGAGGATACGAATCTTACATCGGAGGATCAATGGACGAATCAGTTGAATCCAAATCTCCAAGAGACACAGAAGGCCATGGAACCCACACAGCCTCTACAGCTGCCGGTTCGTTCGTTTCGAATGCGAGCTTTTACCAATACGCCCCCGGTCAAGCCCGCGGCATGGCCTCTAAGGCCCGAATTGCTGCCTACAAGATCTGCTGGAGCTTCGGCTGTTTTGATTCGGACATTCTTGCCGCCATGGACCAGGCTATATCAGATGGCGTCCATGTAATCTCTCTCTCAGTCGGATCCAACGGTTACGCTCCTCAATATGATCATGACTCGATAGCGATTGGGGCATTCGGAGCAGTTGAGCATGGCGTCGTTGTGTCCTGTTCTGCAGGGAATTCTGGACCTGGCCCATACACTGCCGTGAACATCGCCCCCTGGATTATAACTGTCGGAGCTTCCACCATAGACCGGGAGTTTCCGGCGGACGTAATCCTTGGTGATGGCAGAGTTTTCTCCGGTGTTTCGCTTTACTCCGGCGACCCCCTTTCTGACTCCAACCTCCCTTTAGTCTACGCTGGAGATTCTGGAAGCCGGTATTGCTATTCGGGTAGACTCCAACCGTCAAAAGTTAAAGGAAAGATCGTGGTCTGTGATCGTGGTGGAAATGCTCGTGTCGCTAAAGGAAGTGCCGTAAAGCTAGCCGGGGGGGTAGGAATGATACTTGCAAATACAGAGGAAAGTGGGGAAGAATTAATCGCGGATTCTCATCTTATACCGGCTACTATGGTGGGTCAAATTGCAGCAGATAAGATTAAAGAGTATATCAATTTGATTCCATACCCAACTGCAAGGATCAAGTTTTGTGGGACCATGATCGGAACCTCACTGCGCGCTCCAAAGGTCGCTGCTTTTTCGAGCCGTGGTCCGAATTATCGGACCTCGGAGGTTCTAAAGCCGGATGTCATAGCTCCGGGGGTTAACATATTAGCCGGGTGGACTGGGTTTACAAGCCCAACCGATTTGGACATTGATCCAAGAAGAGTGGAGTTTAACATAATTTCGGGTACTTCAATGTCTTGTCCTCATGTTAGTGGAATCGCCGCTTTGCTCCGAAAAGCTTATCCTCAATGGTCCCCTGCTGCTATAAAATCCGCCCTAGTCACAACGTCTTACGATTTGGACAATTCCGGTGCAAAAATTACAGATCTTGCTACCGGAAAAGAGTCGAATCAGTTTATTCACGGGGCCGGACATGTCGATCCGAATCGTGCACTCAATCCCGGATTGGTGTACAACATTGATGCAAGGGACTATGTAGCATTTCTTTGCTCTATCGGATATGATGCCAGGAGGATTTCCGTCTTTGTCCGGGAGCCTACGCGTACTGATATATGCGATAGAAGGGATTTAGGCAGTCCTGGAAATCTGAATTATCCATCATTTAGCGTGGTTTTCGATTCAGGTAGAGATGTGGTGAAGTATAAGAGAGCTGTTACAAATGTTGTAAATGAAGTTGCGGTTTATGAAGTGAAAGTGAAGGCTCCTGAAGGTGTGGAAGTTAACGTGTCACCTAGTAAGCTTGTGTTCAGTGAGGAGAACAAGACAGTGGGTTACGAAATAACGTTTGTTAGTAAGATTAATGATGTTGGAAGTTATTTGGAGAGATTTGGGTCACTTGATTGGTCGGATGGTACTCATCTTGTGAGAAGTCCGATTGCTGTTAGGTGGAGTATGAATGGCTTCGCTGCTTCCATTTGA 2325 49.63 MVMARSSIFFVLFLCLFPAITLSRSSDSSDRPRTFIVHVSKSQKPHLFSSHHHWYTSIIKSLPSSPHGPTKFLYSYNLAVNGFSATLTAAQAEKLRDLPGIVSVVPDEIRHLHTTHTPHFLGLADTYGLWPNSNYADDVIIGVLDTGIWPERPSFSDSGLSDVPSSWKGTCETSSSFPRCNRKIIGARAFYRGYESYIGGSMDESVESKSPRDTEGHGTHTASTAAGSFVSNASFYQYAPGQARGMASKARIAAYKICWSFGCFDSDILAAMDQAISDGVHVISLSVGSNGYAPQYDHDSIAIGAFGAVEHGVVVSCSAGNSGPGPYTAVNIAPWIITVGASTIDREFPADVILGDGRVFSGVSLYSGDPLSDSNLPLVYAGDSGSRYCYSGRLQPSKVKGKIVVCDRGGNARVAKGSAVKLAGGVGMILANTEESGEELIADSHLIPATMVGQIAADKIKEYINLIPYPTARIKFCGTMIGTSLRAPKVAAFSSRGPNYRTSEVLKPDVIAPGVNILAGWTGFTSPTDLDIDPRRVEFNIISGTSMSCPHVSGIAALLRKAYPQWSPAAIKSALVTTSYDLDNSGAKITDLATGKESNQFIHGAGHVDPNRALNPGLVYNIDARDYVAFLCSIGYDARRISVFVREPTRTDICDRRDLGSPGNLNYPSFSVVFDSGRDVVKYKRAVTNVVNEVAVYEVKVKAPEGVEVNVSPSKLVFSEENKTVGYEITFVSKINDVGSYLERFGSLDWSDGTHLVRSPIAVRWSMNGFAASI 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 353909 356916 + Conep17aG0006500.1 Cone17ag0065 455542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0065 774 Gene3D - 631 765 - -
Cone17ag0065 774 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Cone17ag0065 774 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Cone17ag0065 774 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Cone17ag0065 774 FunFam Subtilisin-like protease SBT1.9 23 113 - -
Cone17ag0065 774 Gene3D - 345 481 - -
Cone17ag0065 774 Pfam Fibronectin type-III domain 664 763 IPR041469 -
Cone17ag0065 774 Gene3D Peptidase S8/S53 domain 138 627 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone17ag0065 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 113 IPR037045 -
Cone17ag0065 774 MobiDBLite consensus disorder prediction 202 223 - -
Cone17ag0065 774 FunFam Subtilisin-like protease SBT1.5 138 358 - -
Cone17ag0065 774 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Cone17ag0065 774 FunFam subtilisin-like protease SBT1.5 345 481 - -
Cone17ag0065 774 Pfam Subtilase family 137 595 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone17ag0065 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Cone17ag0065 774 CDD Peptidases_S8_3 111 580 IPR034197 -
Cone17ag0065 774 SUPERFAMILY Subtilisin-like 112 618 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone17ag0065 774 Pfam Peptidase inhibitor I9 34 113 IPR010259 -
Cone17ag0065 774 CDD PA_subtilisin_like 351 474 - -
Cone17ag0065 774 SUPERFAMILY Protease propeptides/inhibitors 32 112 - -
Cone17ag0065 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 761 IPR045051 -
Cone17ag0065 774 SUPERFAMILY PA domain 367 437 IPR046450 -
Cone17ag0065 774 Pfam PA domain 376 460 IPR003137 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0065 Cone-Chr17:353909 Cone6ag1437 Cone-Chr6:11515594 5.37E-257 dispersed
Cone17ag0065 Cone-Chr17:353909 Cone20ag1339 Cone-Chr20:8632633 0 wgd
Cone17ag0065 Cone-Chr17:353909 Cone4ag0017 Cone-Chr4:97797 1.55E-249 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0065 - - - 0.0