Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0082 ATGAAAGGAATATCAAGTGGAGGAGGTGCACCAAATTCTATTGTGATCATGGAAGAAGACGAGTCTAAGGAATGGGTTGCTCAAGTAGAACCCGGCGTGCTCATCACATTCGCCTCTATGCCTCAGGGAGGAAATGATCTCAAACGAATTCGATTCAGCCGTGAATTGTATAATAAATTGCAAGCTCAAACCTGGTGGGCAGAGAACTATGACAAGGTAATGGAACTATACAATGTTCAGAAATTTAATCAACAAGCCATCCCTCTTTCAACCCCTTCAAGATCTGAAGATGAGGGCTTGAAGATTGCGTCTAGAAAGGAGAGTCCGTCAACTCCCCCTCTTGCTCAAGAGTGGCTACCTCAAAATGCACGTCACTGCTGTGATTCGAGCGGTTTAAATTCGACTCCTAAACTTTCCAGCATAAGTGGGGCAAAGGCTGAGATATCATCAGTTGATGGTTCTGTTAGAAGTTGTTTTTCTAAGGATGAAGTTTGCTCTGAAGAGCTCTCGGTGAGCAATGCTAGTGATTTGGAGACCGAATGGGTTGAACAGGATGAGCCGGGAGTGTACGTTACCATCAGAGCATTGCCAGGTGGCGCTCGGGAACTTAGACGAGTTCGATTCAGCCGAGAAAGATTCGGAGAAAAGGATGCGAGATTGTGGTGGGAAGAGAACCGGGCAAGGATACAAGAACAGTACTTATGA 705 45.67 MKGISSGGGAPNSIVIMEEDESKEWVAQVEPGVLITFASMPQGGNDLKRIRFSRELYNKLQAQTWWAENYDKVMELYNVQKFNQQAIPLSTPSRSEDEGLKIASRKESPSTPPLAQEWLPQNARHCCDSSGLNSTPKLSSISGAKAEISSVDGSVRSCFSKDEVCSEELSVSNASDLETEWVEQDEPGVYVTIRALPGGARELRRVRFSRERFGEKDARLWWEENRARIQEQYL 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 455697 456861 + Conep17aG0008200.1 Cone17ag0082 455559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0082 234 ProSiteProfiles BRX domain profile. 179 234 IPR013591 -
Cone17ag0082 234 PANTHER PROTEIN BREVIS RADIX-LIKE 1 12 234 IPR044532 -
Cone17ag0082 234 Pfam Transcription factor regulating root and shoot growth via Pin3 178 233 IPR013591 -
Cone17ag0082 234 Pfam Transcription factor regulating root and shoot growth via Pin3 23 77 IPR013591 -
Cone17ag0082 234 ProSiteProfiles BRX domain profile. 23 78 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0082 Cone-Chr17:455697 Cone7ag0762 Cone-Chr7:4727059 1.63E-102 dispersed
Cone17ag0082 Cone-Chr17:455697 Cone20ag1322 Cone-Chr20:8566229 2.08E-137 wgd
Cone17ag0082 Cone-Chr17:455697 Cone4ag0912 Cone-Chr4:7321505 1.02E-96 wgd
Cone17ag0082 Cone-Chr17:455697 Cone4ag0039 Cone-Chr4:212089 2.78E-108 wgd
Cone17ag0082 Cone-Chr17:455697 Cone4ag0810 Cone-Chr4:5144668 1.44E-105 wgd
Cone17ag0082 Cone-Chr17:455697 Cone7ag0040 Cone-Chr7:175262 4.44E-103 wgd
Cone17ag0082 Cone-Chr17:455697 Cone7ag1238 Cone-Chr7:9188765 1.71E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0082 - - - 0.0