Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag0082 | ATGAAAGGAATATCAAGTGGAGGAGGTGCACCAAATTCTATTGTGATCATGGAAGAAGACGAGTCTAAGGAATGGGTTGCTCAAGTAGAACCCGGCGTGCTCATCACATTCGCCTCTATGCCTCAGGGAGGAAATGATCTCAAACGAATTCGATTCAGCCGTGAATTGTATAATAAATTGCAAGCTCAAACCTGGTGGGCAGAGAACTATGACAAGGTAATGGAACTATACAATGTTCAGAAATTTAATCAACAAGCCATCCCTCTTTCAACCCCTTCAAGATCTGAAGATGAGGGCTTGAAGATTGCGTCTAGAAAGGAGAGTCCGTCAACTCCCCCTCTTGCTCAAGAGTGGCTACCTCAAAATGCACGTCACTGCTGTGATTCGAGCGGTTTAAATTCGACTCCTAAACTTTCCAGCATAAGTGGGGCAAAGGCTGAGATATCATCAGTTGATGGTTCTGTTAGAAGTTGTTTTTCTAAGGATGAAGTTTGCTCTGAAGAGCTCTCGGTGAGCAATGCTAGTGATTTGGAGACCGAATGGGTTGAACAGGATGAGCCGGGAGTGTACGTTACCATCAGAGCATTGCCAGGTGGCGCTCGGGAACTTAGACGAGTTCGATTCAGCCGAGAAAGATTCGGAGAAAAGGATGCGAGATTGTGGTGGGAAGAGAACCGGGCAAGGATACAAGAACAGTACTTATGA | 705 | 45.67 | MKGISSGGGAPNSIVIMEEDESKEWVAQVEPGVLITFASMPQGGNDLKRIRFSRELYNKLQAQTWWAENYDKVMELYNVQKFNQQAIPLSTPSRSEDEGLKIASRKESPSTPPLAQEWLPQNARHCCDSSGLNSTPKLSSISGAKAEISSVDGSVRSCFSKDEVCSEELSVSNASDLETEWVEQDEPGVYVTIRALPGGARELRRVRFSRERFGEKDARLWWEENRARIQEQYL | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 455697 | 456861 | + | Conep17aG0008200.1 | Cone17ag0082 | 455559 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag0082 | 234 | ProSiteProfiles | BRX domain profile. | 179 | 234 | IPR013591 | - | |
Cone17ag0082 | 234 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 12 | 234 | IPR044532 | - | |
Cone17ag0082 | 234 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 178 | 233 | IPR013591 | - | |
Cone17ag0082 | 234 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 23 | 77 | IPR013591 | - | |
Cone17ag0082 | 234 | ProSiteProfiles | BRX domain profile. | 23 | 78 | IPR013591 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0082 | Cone-Chr17:455697 | Cone7ag0762 | Cone-Chr7:4727059 | 1.63E-102 | dispersed | |
Cone17ag0082 | Cone-Chr17:455697 | Cone20ag1322 | Cone-Chr20:8566229 | 2.08E-137 | wgd | |
Cone17ag0082 | Cone-Chr17:455697 | Cone4ag0912 | Cone-Chr4:7321505 | 1.02E-96 | wgd | |
Cone17ag0082 | Cone-Chr17:455697 | Cone4ag0039 | Cone-Chr4:212089 | 2.78E-108 | wgd | |
Cone17ag0082 | Cone-Chr17:455697 | Cone4ag0810 | Cone-Chr4:5144668 | 1.44E-105 | wgd | |
Cone17ag0082 | Cone-Chr17:455697 | Cone7ag0040 | Cone-Chr7:175262 | 4.44E-103 | wgd | |
Cone17ag0082 | Cone-Chr17:455697 | Cone7ag1238 | Cone-Chr7:9188765 | 1.71E-98 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag0082 | - | - | - | 0.0 |