Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0084 ATGGGGCACCAGACCTCGAATCATGATCAAGAGCGAGGCTTGGATTTCGAAGCATCAAGGCCACGCCTGTACAATCCCTACAAGGACCTTCAAGTTCCGACCTATCGAAACTTCCAGCTCCCTACCTCACCTGAGTTCCTCTTCGACGAAGAGGCTCGCCACCAGCGCCGATCTTGGGGCGAGAACCTCACTTTCTACACCGGATGTGGTTACCTAGCAGGTTCAGTCGCCGGAGCCGCCAACGGCTGCGTCACCGGCGTCAAATCATTCGAATCCGGAGATACGATGAAGCTCAGGATCAATCGTGTTCTGAACGCTTCAGGTCATTCAGGTCGTGTTTGGGGAAACCGTCTCGGCGTGATCGCGCTGATATATGCAGGTATAGAGAGCGGGATTGTAGAGCTGAGAGATACCGACGATTCATGGAATAGCGTTGCGGCGGGGCTTGGTGCAGGAGCTCTTTATCGAGCGGCGAGAGGTGTGAGATCTGCGGCGGTGGCAGGGGCTATAGGAGGCGTGTTGGTCGGTGTGGCTGTGACAACTAGACAGGCGTTGAAGCGCTACGTGCCGATATGA 576 55.73 MGHQTSNHDQERGLDFEASRPRLYNPYKDLQVPTYRNFQLPTSPEFLFDEEARHQRRSWGENLTFYTGCGYLAGSVAGAANGCVTGVKSFESGDTMKLRINRVLNASGHSGRVWGNRLGVIALIYAGIESGIVELRDTDDSWNSVAAGLGAGALYRAARGVRSAAVAGAIGGVLVGVAVTTRQALKRYVPI 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 467789 468841 + Conep17aG0008400.1 Cone17ag0084 455561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0084 191 PANTHER TIM23 38 178 IPR045238 GO:0005744(PANTHER)|GO:0008320(PANTHER)|GO:0022857(InterPro)|GO:0030150(PANTHER)|GO:0031305(PANTHER)
Cone17ag0084 191 Pfam Tim17/Tim22/Tim23/Pmp24 family 64 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0084 Cone-Chr17:467789 Cone20ag1320 Cone-Chr20:8554650 3.24E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0084 K17794 - csv:101221925 272.707