Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0092 ATGGTGAAGGGGGAAATAAGAGCAAAGATTCGGCGGAGCCAACTCTACACGTTTGCATTCGGGAGATGCACAGCCGACGTGGAGGAAACAGACCCGACAACCACCGCGGGGTTTTCCCGGGTCGTAGATTGCAACCGATCACATATCATCCCAACAAAGCCTTCAAACTATTGCACAAATTACATTTCAACCACTAAATATTCCGTAATCACCTTCTTCCCGAAAGCATTGTTCGAACAATTCCGAAGAGTTGCAAACATATACTTCCTCATTGCCTCCTTTTTATCCCTCACGCCAATCTCGCCATTTACAGCTCTTTCCCAGATTGTCCCTTTAGCTTTTGTAGTGGGGCTAAGTATGGCAAAAGAAGGGGTGGAGGATTGGCACCGTTTTTTCCAGGACAAGACGGTAAATACCCGGAATATCCGTGTCCATTTAGGCGGTGGCGTTTTCAGTAATAAAGTATGGCACAAGCTTGAAGTGGGAGATGTAGTGAAGGTGGAGAAGGATCATTTCTTCCCGGCAGATTTGCTCCTCTTAGCGACAAGTTACGAGGATGGAATTTGCTATGTAGAGACTATGAATTTAGATGGCGAGACTAATTTGAAAGTAAAAAGATGTTTGGAAGTGACATTGCCTTTAGAAGATGATGGTTGTTTTAAGGATTTTTCGGGTATAGTTAAATGCGAAGATCCGAACCCAAGTCTTTATACATTTGTTGGTAATCTGGAGTATGAAAGACAGGTCTTCCCTCTTGATCCTTCTCAGATTTTACTTCGTGATTCGAAACTAAGGAACACGGCTTTTGCCTATGGGGTAGTGATTTTTACGGGGCATGATAGTAAAGTGATGCAAAACGCGACTAACTCTCCTTCGAAAAGAAGCCGGGTAGAGAAAAAGATGGACAAGATCATTTACGTTCTTTTCTCTATCCTTGTCTTGATTTCCGTGGTTAGCTCAATCGGGTTTGGGGAAAGAACCATGACTCAAATGCCGAAATGGTGGTACTTACGGCCTGGAACGGACAATCCACTGTATGATCCTAGCAAGCCAGTTACTTCCGGACTCTTCCATTTGGTCACAGCTCTAATCCTTTATGGTTATTTGATACCAATTTCTCTCTATGTCTCAATTGAGGTGGTCAAGGTTCTTCAAGCTTCATTCATTAGCAAGGACTTGCATATGTTTGACGATGAGACTAATATCCCTCCCAACGCACGAACCTCTAATTTGAATGAGGAGTTAGGACAAGTCGACACGATTCTTTCGGACAAAACCGGAACTTTGACATGTAACCAAATGGATTTTTTGAAATGTTCTATTGCCGGGGTTGCTTATGGGATCCGCCCTAGTGAGGTGGAGCTAGCGGCCGAGAAGCAAATGGCCCATAGGCATGGAGGGGATGATGTGGAATCGGTTATTTCTGTTGTTTCTGTTTATGATGGGAAGGGATCGAAACAGGCCATAAAGGGTTTTAGTTTCGAGGATGGTCGGCTATTGGACAGGAACTGGTTGAACGAGGCTTGTCCGGACGTTATTTTGATGTTCTTCCGGATACTTGCCGTTTGTCAGAGTGCAATCCCAGAAGTCAATGAAGATACAGGTTTTTTTACTTATGAAGCTGAGTCGCCTGATGAAGGTGCATTTCTTGTTGCGGCTAGAGAGTTCGGATTTGAATTTTGTAAGAGAACTCAATCCGGCTTGGTCGTAAGGGAAAGATATGCTCCTTCCAGAGAGACACATGAAAGAGAGTACAAGATTTTAAACTTGTTGGAATTTACGAGCAAGAGAAAGCGTATGTCGGTTATTGTTCGAGATGAGGATGGGCAGATTCTTCTCTTTTGCAAAGGTGCTGATAGCATTATATTTGAACGATTATCGAAAAGTGGGAGAATGTATGAACAAGCTACAGCAAGGCATTTGAATGAGTATGGAGATGCGGGTTTACGTACATTGGCACTTTCTTATAAGAAGCTCGAAGAATCCGAGTTCAATGCTTGGAACAATGAGTTTCAGAAAGCTAAGTCCTCTATAGGGGCTGATAGAGAATCGACCCTAGAGAGAATTTCCGATCAAATGGAACGAGAATTGATCCTAGTCGGCGCAACTGCCGTTGAAGACAAGTTGCAAAGAGGGGTACCTCAATGCATAGATAAACTGGCTCAAGCCGGTATCAAGATTTGGGTTTTAACTGGTGATAAGATGGAGACTGCTATCAACATAGGATTTGCTTGTAGCTTACTGCGGGAGGGGATGAAGCAGATCTGTATAACAACACCTAATATTGATACATTAGTTAAGGATAGAAAAAAGGCTATTATGGATAATGTTGTGAATCAAATTACTAATGCGTCGCAAATGATCATACTAGAGAAGGATCCACATGCTGCATTTGCTTTGATTATAGATGGGAAAACACTAGCTTATGCTTTAGAAGATGATATGAAACACCAATTCCTCGGACTTGCCGTGGATTGTGCATCTGTTATCTGTTGCCGTGTCTCTCCAAGACAGAAGGCATTGGTAACTCGGTTAGTCAAGGAAGGTACTGGAAAAACGACCCTAGGAATCGGAGACGGTGCAAATGATGTCGGAATGATCCAAGAGGCTGATATTGGTGTTGGTATTAGTGGAGTTGAAGGTATGCAGGCTGTAATGGCTAGCGACTTTTCAATCGCTCAATTCCGATTTCTGGAGAGACTTCTAGTAGTTCATGGACATTGGTGCTACAAAAGGATAGCACAAATGATATGCTACTTCTTCTACAAGAACATAGCTTTTGGACTAACCCTCTTCTACTTCGAGGCATTCACCGGATTTTCCGGACAATCCATTTACGACGATTATTACATGATATCATATAATGTCATTCTCACCTCAATGCCCGTCATTTCAGTCGGAGTTTTCGAACAAGACGTCTCTTCCGATGTCTGCCTTCAGTTTCCAGCACTATATCAACAAGGATCCCAAAACCTGTTTTTCGATTGGTATCGAATATTAGGATGGATGGGAAACGCCGCTTACACGTCGCTAGTTACATTCTTCTTCAACATTGCAATCTATTGGGAACAGGCGTTTAGTTCCGGGGGCCACACTGCTGATATGGCGGCACTCGGGACCATCATGTTCACGTGCATCGTGTGGGCCGTCAACTGCCAGATCGCATTGTTCATGAGCCACTTCACTTTCATCCAACACATTCTAATTTGGGGCAGTATTGCATTATGGTACTTGTTCATCTTAATTTACGGTAGTACCTCGTTCGCGGCTAGTAATTACCATATCCTACGGGAACGTCTGGGCCCTGCCCCGAGTTATTGGATGACTACTTTCTTAGTATCGCTTGCTTCTAATCTGCCTTACATTATCCATCTAGCTTATACAAGATGTTTTGACCCTATGGATCATCATATCATTCAAGAGATTAAGTACTTTGGAAAAGACAAGAAGGATCGAGTTATGTGGAACCAGGAGAAGTCGAAAGCACGGCAGAAGACATATGTCGGGTTTACGGCTAGGGTCGAGGCGAAAATAAGGGAGATTAAAGGAAGTTGTAGAAGAAGTCATCTGTTTAATCCTAAACTTTGA 3588 43.14 MVKGEIRAKIRRSQLYTFAFGRCTADVEETDPTTTAGFSRVVDCNRSHIIPTKPSNYCTNYISTTKYSVITFFPKALFEQFRRVANIYFLIASFLSLTPISPFTALSQIVPLAFVVGLSMAKEGVEDWHRFFQDKTVNTRNIRVHLGGGVFSNKVWHKLEVGDVVKVEKDHFFPADLLLLATSYEDGICYVETMNLDGETNLKVKRCLEVTLPLEDDGCFKDFSGIVKCEDPNPSLYTFVGNLEYERQVFPLDPSQILLRDSKLRNTAFAYGVVIFTGHDSKVMQNATNSPSKRSRVEKKMDKIIYVLFSILVLISVVSSIGFGERTMTQMPKWWYLRPGTDNPLYDPSKPVTSGLFHLVTALILYGYLIPISLYVSIEVVKVLQASFISKDLHMFDDETNIPPNARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGVAYGIRPSEVELAAEKQMAHRHGGDDVESVISVVSVYDGKGSKQAIKGFSFEDGRLLDRNWLNEACPDVILMFFRILAVCQSAIPEVNEDTGFFTYEAESPDEGAFLVAAREFGFEFCKRTQSGLVVRERYAPSRETHEREYKILNLLEFTSKRKRMSVIVRDEDGQILLFCKGADSIIFERLSKSGRMYEQATARHLNEYGDAGLRTLALSYKKLEESEFNAWNNEFQKAKSSIGADRESTLERISDQMERELILVGATAVEDKLQRGVPQCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLREGMKQICITTPNIDTLVKDRKKAIMDNVVNQITNASQMIILEKDPHAAFALIIDGKTLAYALEDDMKHQFLGLAVDCASVICCRVSPRQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSIYDDYYMISYNVILTSMPVISVGVFEQDVSSDVCLQFPALYQQGSQNLFFDWYRILGWMGNAAYTSLVTFFFNIAIYWEQAFSSGGHTADMAALGTIMFTCIVWAVNCQIALFMSHFTFIQHILIWGSIALWYLFILIYGSTSFAASNYHILRERLGPAPSYWMTTFLVSLASNLPYIIHLAYTRCFDPMDHHIIQEIKYFGKDKKDRVMWNQEKSKARQKTYVGFTARVEAKIREIKGSCRRSHLFNPKL 1195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 486617 491111 - Conep17aG0009200.1 Cone17ag0092 455569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0092 1195 CDD P-type_ATPase_APLT_Dnf-like 60 1016 - -
Cone17ag0092 1195 SFLD p-type atpase 406 908 IPR044492 -
Cone17ag0092 1195 Gene3D - 131 290 - -
Cone17ag0092 1195 Pfam Cation transport ATPase (P-type) 522 628 - -
Cone17ag0092 1195 Pfam Phospholipid-translocating ATPase N-terminal 52 108 IPR032631 -
Cone17ag0092 1195 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Cone17ag0092 1195 PRINTS P-type cation-transporting ATPase superfamily signature 857 876 - -
Cone17ag0092 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1125 IPR023298 -
Cone17ag0092 1195 FunFam Phospholipid-transporting ATPase 700 897 - -
Cone17ag0092 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Cone17ag0092 1195 SUPERFAMILY Calcium ATPase, transduction domain A 147 287 IPR008250 -
Cone17ag0092 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1142 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone17ag0092 1195 FunFam Phospholipid-transporting ATPase 567 698 - -
Cone17ag0092 1195 SFLD C1.7: P-type atpase like 406 908 - -
Cone17ag0092 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 885 1133 IPR032630 -
Cone17ag0092 1195 NCBIfam phospholipid-translocating P-type ATPase 57 1141 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone17ag0092 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 429 662 IPR023299 GO:0000166(InterPro)
Cone17ag0092 1195 Gene3D - 566 700 IPR023299 GO:0000166(InterPro)
Cone17ag0092 1195 SUPERFAMILY HAD-like 410 901 IPR036412 -
Cone17ag0092 1195 NCBIfam HAD-IC family P-type ATPase 829 938 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone17ag0092 1195 Gene3D - 701 897 IPR023214 -
Cone17ag0092 1195 FunFam Phospholipid-transporting ATPase 118 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0092 Cone-Chr17:486617 Cone19ag0872 Cone-Chr19:6833295 0 dispersed
Cone17ag0092 Cone-Chr17:486617 Cone4ag0921 Cone-Chr4:7517226 0 wgd
Cone17ag0092 Cone-Chr17:486617 Cone7ag1229 Cone-Chr7:9118286 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0092 K01530 - csv:101221220 1794.25