Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0133 ATGGATCTTCCACCGCGATTTCTCCTCTACTTACCTCTACTTCTCCTCTTCCAATTTCACCGTCTCTGTTCGTCTTACCCGACGCCGATGAACTGTACGGACACCACCCGCGTATGCACTTCGTTCTTAGCCTTCAAGCCACAGTCGAACCAGACTTTATCCATGATCCAGAGCATGTTCGACGTTCTACCAGGAGACGTCACCGTCGATGGCCGTGGAGGTGGCGGCCGATGGGACTATATCTTCATCAAGAAGAACTGTTCGTGTGCGGCGGGGTATAAGAAGTACATATCGAACACGACGCTAACCGTCAGATCAAACGAGGGTTATGTGGACGAGTTGGTTATGGAGGCTTATGACGGGCTCGCTTTGATGCTTAATACAACGAGGAAGGCAACGATTGGGGCTGTGATCTCCTTGAGATTGTTCTGCGGCTGTTCGAGTGCGCTTTGGAATTACTTGATGAGCTATGTGATGAAGGATGGCGATAGTATTCAATCCCTTTCCAGTCGATTTGGGGTTAGTATGGATAGTATTGAATCTGTGAATGGAATTCAGAATCCTGATAATGTCACTGTCGGTGCTCTCTATTACATTCCTCTCAATTCAGTTCCTGGTGAGCCTTATCCCGTGGAGACTGATATTCCCCCGTCTTCTTCCCCAACTATGGCTCCGCCTGCTGACAGTTTCTCAGCAACTGCATGGAAGCATAAGGGTCATGGTCCGTATGTATGGATTGTTGGAAGTTTAGGTGTTGTTCTAGTTCTTGTTTTGTTGGGGGTAGTTGTTTTCTGTGCCTCAAAGTCATTGAACTGCTTTTCGGGATCTAGAAGAACTCGTGTAAAAGATCCTAGTAACAAGGATTCACATAAGTTTCAAATTCTTCGAAAGCCAAGCTTCTTCTGTGCTTCTGGAAGATACGTTTGCTGCCGATCTGGAGATCATAAACAAACCAATGGGGAACCAAGCAATAACCAAGTTACGGTTCCAAAAGGTTTAGAGAGCGTTGTGTTTGATGTGGAAAAGCCTGTGGTTTTTACATTCGAAGAAATCTTTTCCTCAACCGACGGTTTCTCTGATTCGTATCTTCTAGGCCATGGAACTTATGGCTCGGTGTATTATGCCTCCCTTCGTGACCAGGAAGTGGCAATTAAGAGAATGACTGCTATGAAAACTAAAGAGTTTATGTCAGAAATGAAGGTCCTCTGCAGGGTCCATCATGCAAATCTGGTAGAATTGATTGGATATGCTGCCAGCGAGGGTGAACTCTTCCTTATTTATGAATACGCCCAAAAGGGTTCTCTTGGAAGTCATTTACATGATCCTCAGAACAAGGGACATACATCACTTTCTTGGATCATGCGGGTCCAAATTGCTCTTGATGCTGCTAGAGGTCTTGAATACATTCACGAGCACACTAAAACCCATTACGTGCATCGAGATATCAAGACAAGCAATATATTACTAGATAGTACTTTTCGAGCTAAGATTTCTGATTTTGGGTTGGCAAAACTCGTTGGAAAAACAAGTGAGGGGGAAGCTTCCGTGACCAAAGTTGTAGGGACATTTGGTTATTTGGCTCCAGAATATTTGAGTGATGGTCACGCCACAGCCAAAAGTGACGTGTATGCCTTTGGTATTGTTCTTTTCGAGCTTATATCTGGAAAGGAGGCCATAATTCGAACTGAAGGTCTGACCATGAAAAATATTGAAAGACGGTCTCTCGCCTCCATTATGCTGGCTGCTCTTAGGAATGCACCCGACTCAATGAGTATGTCAAGCCTGAAAGATCACATCGACCCAAATATGTTGGATTTGTATCCTCATGATTGTCTATTCAAGATGTCTATTCTTGCAAAGCAATGCGTGGAGGAGGACCCCATTCTCCGGCCCGATATGAAGCAAGTTGTGATCTCCCTGTCTCAAATATTGTTGTCTTCTGTCGAGTGGGAAGCAACTCTTGCCGGCAACAGCCAAGTTTTCAGTGGTCTTGTTCAAGGAAGATAG 2007 44.94 MDLPPRFLLYLPLLLLFQFHRLCSSYPTPMNCTDTTRVCTSFLAFKPQSNQTLSMIQSMFDVLPGDVTVDGRGGGGRWDYIFIKKNCSCAAGYKKYISNTTLTVRSNEGYVDELVMEAYDGLALMLNTTRKATIGAVISLRLFCGCSSALWNYLMSYVMKDGDSIQSLSSRFGVSMDSIESVNGIQNPDNVTVGALYYIPLNSVPGEPYPVETDIPPSSSPTMAPPADSFSATAWKHKGHGPYVWIVGSLGVVLVLVLLGVVVFCASKSLNCFSGSRRTRVKDPSNKDSHKFQILRKPSFFCASGRYVCCRSGDHKQTNGEPSNNQVTVPKGLESVVFDVEKPVVFTFEEIFSSTDGFSDSYLLGHGTYGSVYYASLRDQEVAIKRMTAMKTKEFMSEMKVLCRVHHANLVELIGYAASEGELFLIYEYAQKGSLGSHLHDPQNKGHTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDSTFRAKISDFGLAKLVGKTSEGEASVTKVVGTFGYLAPEYLSDGHATAKSDVYAFGIVLFELISGKEAIIRTEGLTMKNIERRSLASIMLAALRNAPDSMSMSSLKDHIDPNMLDLYPHDCLFKMSILAKQCVEEDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 684423 688070 - Conep17aG0013400.1 Cone17ag0133 455610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0133 668 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 14 657 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Cone17ag0133 668 SUPERFAMILY LysM domain 155 200 IPR036779 -
Cone17ag0133 668 ProSiteProfiles LysM domain profile. 155 199 IPR018392 -
Cone17ag0133 668 Gene3D Transferase(Phosphotransferase) domain 1 431 655 - -
Cone17ag0133 668 ProSitePatterns Protein kinases ATP-binding region signature. 364 391 IPR017441 GO:0005524(InterPro)
Cone17ag0133 668 SMART serkin_6 358 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag0133 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0133 668 ProSiteProfiles Protein kinase domain profile. 358 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag0133 668 Gene3D LysM domain 151 206 IPR036779 -
Cone17ag0133 668 SMART LysM_2 156 200 IPR018392 -
Cone17ag0133 668 FunFam PTI1-like tyrosine-protein kinase 3 430 654 - -
Cone17ag0133 668 Pfam LysM domain 157 194 IPR018392 -
Cone17ag0133 668 Pfam Protein tyrosine and serine/threonine kinase 364 638 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0133 668 Gene3D Phosphorylase Kinase; domain 1 331 429 - -
Cone17ag0133 668 SUPERFAMILY Protein kinase-like (PK-like) 338 640 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0133 Cone-Chr17:684423 Cone19ag1053 Cone-Chr19:7770151 2.11E-120 dispersed
Cone5ag1244 Cone-Chr5:5817793 Cone17ag0133 Cone-Chr17:684423 5.02E-39 dispersed
Cone3ag1321 Cone-Chr3:32159066 Cone17ag0133 Cone-Chr17:684423 9.27E-88 transposed
Cone17ag0133 Cone-Chr17:684423 Cone20ag1276 Cone-Chr20:8330605 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82245 PF02990 EMP70 2.30E-220 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0133 - - - 0.0