Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag0178 | ATGGATTTCTGGCCAGAGTTTCTCGCTAGCAGTTGGGGCAAAGAGTTCGTGGCAGGCGGCTGTGGGGGCATTGCTGGAATCATCTCAGGCTACCCACTCGACACTCTTCGAATCAAACAACAACAAAACTCCAATTCTGGTTCCGCCATTTGCATCCTTCGCAAGGTCATCTCCTCAGAAGGCCCTGCCGGTCTCTATAGAGGCATGGCCGCCCCCTTAGCTTCCGTCACCTTTCAGAACGCCATGGCGTTCCAGATCTACGCCGTCCTGTCACGAGCACTAGACTCATCCGTTCCGGCCTCGGAACCGCCGTCCCTAAAAGGTGTCGCTCTCGCCGGAATCAGTACCGGAGCGATTCAAAGCCTCGTACTAACTCCCGTTGAGCTTATAAAAATCCGTCTCCAATTACAAACCTCAAACCCTAACCCGACCCCAACAACTCACCTTCTACCGCCTCAAACGGGCCCACTCAACGTCTCAAAAGCCATCCTCAAGACAGAGGGATTAAAAGGTATGTACAGAGGCCTCGCCATAACCGTGCTACGAGATGCTCCTTCCCATGGCGTCTACTTCTCGACTTACGAGCTTATGAGAGAGATGCTTCATCCCGGTTGCCGGAAGGGCGGGGAGGAGAGCGTGAGGACGATGCTTGTGGCTGGTGGGCTGGCCGGAGTGGCGAGCTGGGTTTGTTGTTACCCGTTGGACGTGGTGAAGACGAGGTTGCAGGCCCAATCGGGCTTTGGGCCGAGGAAGTATAGTGGGATTGTGGACTGTTTGAGAAAGAGTGTGAGGGAAGAGGGCTTTAGAGTTTTGTGGAGAGGTTTGGGAACTGCAGTTGCTAGAGCGTTTGTGGTTAATGGGGCGATTTTTACTGCGTATGAGACTGCTTTGAGTTGGGGTCAAGAATTTGTAGCAGGTGGGTGTGGAGGCATTGCCGGAATAATCTCCGGCTATCCACTTGACACTCTTCGTGTCAAACAACAACACTCAAGTTCCGGTTCTGCTCTCATGATCCTCCGAAATGTAGTCACTGCAGAAGGACCTACTGCCCTCTATAGAGGCATGGCTGCCCCTTTGGCTTCCGTCGCTTTTCAGAATGCTGTGGCATTTCAAATCTATGCAGTCCTTTCTCGAAAACTTGATCCTCCTGTTTCAGCCAGTGATCCACCTTCTTTTAAAGGAGTAAGTCTTGGAGGATTCGGAACTGGAGCACTACAGAGCTTTCTGTTAACTCCAGTAGAGCTTATAAAAATTCAACTCCAATTGCAGAGCACAAGAAATAAAGAACTAGTATCTCCAACAGGTCCTATCAATGTTGCTAAACGCATCCTCAAAGCAGAAGGGTTAAAGGGTTTATATCGAGGTTTTACCATAACTGTCTTCCGTGATGCTCCTGCCCACGCTGTCTACTTCTGGACCTATGAGTATATGAAAGAGCAGCTTCACCCGGGTAGTAGAAAGAATGGAGGGGAGAGCTTGGGAACTACTTTGTTAAGTGGAGGGTTGGCAGGGGTTGCTAGCTGGGTTTGCTGTTATCCATTAGATGTCGTGAAGACAAGATTGCAGGCTCAATCAAAGTCTTTCCCGGGAAAATATGATGGGATTGTCGATTGTTTTCGGAAGAGTGTAAGAGAAGAGGGGGCCAGAGTGCTTTGGAGAGGACTAGGAACGGCAGTGGCTAGAGCATTTGTGGTAAATGGTGCGATCTTTGCTGCCTATGAGACAGCTTTGAGGTGCATTAACACCAATAGAGGTCTTTAG | 1761 | 50.14 | MDFWPEFLASSWGKEFVAGGCGGIAGIISGYPLDTLRIKQQQNSNSGSAICILRKVISSEGPAGLYRGMAAPLASVTFQNAMAFQIYAVLSRALDSSVPASEPPSLKGVALAGISTGAIQSLVLTPVELIKIRLQLQTSNPNPTPTTHLLPPQTGPLNVSKAILKTEGLKGMYRGLAITVLRDAPSHGVYFSTYELMREMLHPGCRKGGEESVRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSGFGPRKYSGIVDCLRKSVREEGFRVLWRGLGTAVARAFVVNGAIFTAYETALSWGQEFVAGGCGGIAGIISGYPLDTLRVKQQHSSSGSALMILRNVVTAEGPTALYRGMAAPLASVAFQNAVAFQIYAVLSRKLDPPVSASDPPSFKGVSLGGFGTGALQSFLLTPVELIKIQLQLQSTRNKELVSPTGPINVAKRILKAEGLKGLYRGFTITVFRDAPAHAVYFWTYEYMKEQLHPGSRKNGGESLGTTLLSGGLAGVASWVCCYPLDVVKTRLQAQSKSFPGKYDGIVDCFRKSVREEGARVLWRGLGTAVARAFVVNGAIFAAYETALRCINTNRGL | 586 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 849799 | 854126 | - | Conep17aG0018000.1 | Cone17ag0178 | 455655 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag0178 | 586 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 8 | 298 | IPR050567 | GO:0006810(PANTHER)|GO:0022857(PANTHER) | |
Cone17ag0178 | 586 | Gene3D | Mitochondrial carrier domain | 302 | 584 | IPR023395 | - | |
Cone17ag0178 | 586 | Gene3D | Mitochondrial carrier domain | 13 | 301 | IPR023395 | - | |
Cone17ag0178 | 586 | PRINTS | Mitochondrial carrier protein signature | 500 | 522 | IPR002067 | GO:0055085(InterPro) | |
Cone17ag0178 | 586 | PRINTS | Mitochondrial carrier protein signature | 453 | 471 | IPR002067 | GO:0055085(InterPro) | |
Cone17ag0178 | 586 | PRINTS | Mitochondrial carrier protein signature | 302 | 315 | IPR002067 | GO:0055085(InterPro) | |
Cone17ag0178 | 586 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 211 | 299 | IPR018108 | - | |
Cone17ag0178 | 586 | SUPERFAMILY | Mitochondrial carrier | 11 | 294 | IPR023395 | - | |
Cone17ag0178 | 586 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 390 | 480 | IPR018108 | - | |
Cone17ag0178 | 586 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 491 | 579 | IPR018108 | - | |
Cone17ag0178 | 586 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 104 | 200 | IPR018108 | - | |
Cone17ag0178 | 586 | Pfam | Mitochondrial carrier protein | 110 | 202 | IPR018108 | - | |
Cone17ag0178 | 586 | Pfam | Mitochondrial carrier protein | 492 | 581 | IPR018108 | - | |
Cone17ag0178 | 586 | Pfam | Mitochondrial carrier protein | 297 | 379 | IPR018108 | - | |
Cone17ag0178 | 586 | Pfam | Mitochondrial carrier protein | 11 | 94 | IPR018108 | - | |
Cone17ag0178 | 586 | Pfam | Mitochondrial carrier protein | 212 | 296 | IPR018108 | - | |
Cone17ag0178 | 586 | Pfam | Mitochondrial carrier protein | 397 | 482 | IPR018108 | - | |
Cone17ag0178 | 586 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 300 | 379 | IPR018108 | - | |
Cone17ag0178 | 586 | SUPERFAMILY | Mitochondrial carrier | 297 | 574 | IPR023395 | - | |
Cone17ag0178 | 586 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 13 | 93 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0178 | Cone-Chr17:849799 | Cone20ag1234 | Cone-Chr20:8171942 | 1.36E-182 | dispersed | |
Cone17ag0178 | Cone-Chr17:849799 | Cone20ag1233 | Cone-Chr20:8169237 | 6.03E-169 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag0178 | K15109 | - | rcu:8274512 | 453.366 |