Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag0200 | ATGAGAGAAAAAGAAAATACAATCACTGCTAATGGCAGAATAACACGGGCTCGAGCTGCTACATTTCGAGCCCAGGTCCATCCTACTACACAAGAACCTCCACAGCAGAATCAAAAGCAGGTTTTACGAATTAGTTCCAAAAGAGCAGCCTCTGATGAAAACAAAGCCAATTCTACGACTAATTGTATATATCTGCAGTGTAAGAAAAGGGCAGTGCTTGAAGATGTAACAAATATTTGCTGTGAACCTTCATACAAGAAGTGCTTTAATGCAGCTAAAATTCAGGTTACAAAAAGAAAGCAGACTAGGAAAGTTCAGGTCAAGGAACAGTTTGAAGCTGATTTGACAGGAGAGTGTGTGCAAGTAGGAACAGTTAAAACCGAAAATGAACCAGGAGAAGTTGATGAGCACCCAATTCATTTGTTAGATCAAAACAAAGCCCCTCAAATAGGTACTACAAAAGAGGGTGATACATATGATGACTGGCTTAGAAGTAAAACACTCCAAAATAGTTTGCAACCCCATGATACAAGCAACAAAGAAGGAGGAGGCCGTCTTGGGACCATATCAAGCAACCCTGACATAAAGGATATCGATTCAGACACCAAGGATCCTCAACTTTGCAGCGTCTATGCACCCGAAATCTATACCAATTTACGTGCTAATGAGCTTTCTAAAAGGCCACATCTGAATTTCATGGAAACAATTCAACGAGATATAACCCCATTTATGCGGGGAGTCTTGGTCGATTGGCTTGTTGAGGTTTCAGAGGAATACAACTTGGTTTCAGACACGCTGTTCTTAACAACATATCTGATAGATTGGTTTCTCTCTAAAAATTACATTGAAAGGCAAAAACTTCAGCTTTTGGGCATCACTTGCATGCTGATTTCCTCGAAATTTGAAGAAATTTGTGCACCGCGTGTTGAAGAGTTTTGCTTTATCACAGACAATACCTACACCAAAGAGGAGGTGTTGAAAATGGAAGATCAAGTATTGAAGCACATCGGCTTTCAACTTTTTTCACCAACCACAAAAGCTTTTCTCAGGAGATTTCTACTAGCTGCTCAAGCTTCATATAAGACCCCTAGTCTTGAATTGGAGTTCTTAGCCAATTATCTAGCCGAGCTCACGTTAATGGACTACGGTTTCTTGAATTTCCTTCCTTCTATTGTTGCTGCCTCGGCTGTTTTCCTTTCCAAATGGACATTAGATCAATCTAATCACCCATGGAATGCAACACTAGAACACTATACTTCATACAAGGGATCCGATTTAAAAGCTGCAGTTCTTGCTCTACGAGATTTGCAGATGAACACGAGTGACTCCCCTCTTGGTGCTATACGGAAAAAGTATCGGCAAGAAAAGTTTAAATCTGTTGCTGTTTTTTCTTCCCCAAAACTGATCGAGACTCTGTTCTAG | 1422 | 40.37 | MREKENTITANGRITRARAATFRAQVHPTTQEPPQQNQKQVLRISSKRAASDENKANSTTNCIYLQCKKRAVLEDVTNICCEPSYKKCFNAAKIQVTKRKQTRKVQVKEQFEADLTGECVQVGTVKTENEPGEVDEHPIHLLDQNKAPQIGTTKEGDTYDDWLRSKTLQNSLQPHDTSNKEGGGRLGTISSNPDIKDIDSDTKDPQLCSVYAPEIYTNLRANELSKRPHLNFMETIQRDITPFMRGVLVDWLVEVSEEYNLVSDTLFLTTYLIDWFLSKNYIERQKLQLLGITCMLISSKFEEICAPRVEEFCFITDNTYTKEEVLKMEDQVLKHIGFQLFSPTTKAFLRRFLLAAQASYKTPSLELEFLANYLAELTLMDYGFLNFLPSIVAASAVFLSKWTLDQSNHPWNATLEHYTSYKGSDLKAAVLALRDLQMNTSDSPLGAIRKKYRQEKFKSVAVFSSPKLIETLF | 473 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 961179 | 963642 | + | Conep17aG0020300.1 | Cone17ag0200 | 455677 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag0200 | 473 | CDD | CYCLIN_AtCycA-like_rpt2 | 343 | 457 | - | - | |
Cone17ag0200 | 473 | CDD | CYCLIN_AtCycA_like_rpt1 | 204 | 339 | - | - | |
Cone17ag0200 | 473 | Pfam | Cyclin, C-terminal domain | 343 | 465 | IPR004367 | - | |
Cone17ag0200 | 473 | MobiDBLite | consensus disorder prediction | 25 | 55 | - | - | |
Cone17ag0200 | 473 | SUPERFAMILY | Cyclin-like | 343 | 468 | IPR036915 | - | |
Cone17ag0200 | 473 | PANTHER | CYCLINS | 194 | 454 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone17ag0200 | 473 | PIRSF | Cyclin_A_B_D_E | 2 | 472 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Cone17ag0200 | 473 | SMART | cyclin_7 | 250 | 334 | IPR013763 | - | |
Cone17ag0200 | 473 | SMART | cyclin_7 | 347 | 435 | IPR013763 | - | |
Cone17ag0200 | 473 | FunFam | Mitotic cyclin 6 | 228 | 328 | - | - | |
Cone17ag0200 | 473 | Gene3D | - | 214 | 461 | - | - | |
Cone17ag0200 | 473 | MobiDBLite | consensus disorder prediction | 171 | 186 | - | - | |
Cone17ag0200 | 473 | Gene3D | - | 228 | 341 | - | - | |
Cone17ag0200 | 473 | SMART | Cyclin_C_2 | 343 | 466 | IPR004367 | - | |
Cone17ag0200 | 473 | MobiDBLite | consensus disorder prediction | 171 | 198 | - | - | |
Cone17ag0200 | 473 | Pfam | Cyclin, N-terminal domain | 214 | 340 | IPR006671 | - | |
Cone17ag0200 | 473 | FunFam | Cyclin A1 | 330 | 462 | - | - | |
Cone17ag0200 | 473 | SUPERFAMILY | Cyclin-like | 203 | 340 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0200 | Cone-Chr17:961179 | Cone4ag1423 | Cone-Chr4:11351242 | 5.04E-96 | dispersed | |
Cone17ag0200 | Cone-Chr17:961179 | Cone20ag1212 | Cone-Chr20:8063401 | 1.07E-289 | wgd | |
Cone17ag0200 | Cone-Chr17:961179 | Cone4ag1826 | Cone-Chr4:13192809 | 6.56E-137 | wgd | |
Cone17ag0200 | Cone-Chr17:961179 | Cone7ag1730 | Cone-Chr7:11463130 | 3.20E-138 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag0200 | K06627 | - | rcu:8271347 | 521.546 |