Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0241 ATGGGGACGACGGTGCTTTCTGACTTCGCGACGGAGATTTTGATCCCGGTCTGCGCGGTGGTCGGGATCGCATTCTCGCTGGTGCAGTGGATGCTGGTCTCGCTCGTGAAGCTCACTCCCGACCGTCACTCGCCGGCTGACGGCTCTAACAACAAGAAGAACGGTTATAATGACTATCTGATCGAAGAGGAGGAAGGTGTAAACGACGAAAACGACATCGTCGTCAAGTGTGCGGAAATACAGAATGCCATCTCTGAAGGTGCGTCATCCTTTCTTTTCACTGAATATCAGTATGTTGGGGTCTTTATGGTTGCATTTGCCATTTTGATATTTCTCTTCCTTGGATCGGTTGAGGGCTTCAGCACAAAGAGTCGGCCATGTACTTACAATCCAGAAAATGTATGCAAGCCTGCTCTTGCCACAGCACTCTTCAGCACTGTATCTTTCTTGCTAGGTGCTATAACTTCAGTCCTGTCTGGTTACCTTGGGATGAAAGTCGCGACCTATGCCAATGCAAGGACTACATTGGAAGCAAGAAAGGGTGTTGGTAAGGCCTTTATTACTGCATTCAGGTCTGGTGCTGTGATGGGTTTTCTCCTTGCTGCAAATGGTCTTCTGGTTCTGTACGTTACAATCAATCTCTTTAAGCTGTACTATGGAGATGATTGGGAAGGACTTTTTGAGGCTATAACTGGTTATGGTCTTGGTGGATCTTCCATGGCTCTGTTCGGGAGAGTTGGTGGTGGAATTTACACCAAGGCGGCAGATGTGGGTGCTGACCTGGTCGGAAAGGTTGAAAGAAACATTCCAGAAGATGATCCAAGAAACCCAGCTGTTATTGCAGACAATGTTGGCGATAATGTTGGTGATATTGCCGGAATGGGATCTGATTTATTTGGCTCCTATGCTGAATCATCATGTGCTGCCCTTATTGTGGCTTCCATATCCTCTTTTGGAATTGATCATAATTTCACTGCTATGTGCTACCCTCTGCTCATTAGTTCTATGGGTATCATAGTCTGCTTGATCACAACCCTCTTTGCCACTGATTTCTTTGAGATCAAGGCTGTCAAGGAAATCGAACCAGCATTGAAAAACCAGCTCATCATTTCCACAGTTCTCATGACCCTTGGAATTGCAATTATCAGCTGGATCGCTCTGCCACCATCTTTCACAATCTTCAATTTCGGGACTCAAAAAGTTGTGAAAAACTGGCAGCTGTTCTTGTGTGTGTGTGTTGGTTTATGGGCTGGACTTATCATTGGATTTGTTACAGAGTATTTTACTAGCAATGCTTACAGCCCAGTCCAAGATGTTGCTGACTCCTGCAGAACAGGAGCTGCTACAAACGTTATCTTCGGCCTTGCTTTGGGATACAAATCTGTTATCATTCCAATCTTTGCCATTGCTATTAGTATTTTTGTTAGTTTCACCTTTGCTGCTATGTATGGAGTTGCTGTTGCTGCCCTTGGAATGCTAAGCACTATTGCCACTGGGCTTGCCATAGACGCGTATGGGCCCATTAGTGACAATGCTGGAGGCATTGCTGAAATGGCCGGAATGAGTCACAGAATCCGTGAAAGAACTGATGCTCTTGATGCTGCTGGAAACACCACTGCTGCTATTGGAAAGGGATTTGCTATTGGATCTGCTGCATTGGTCTCTCTGGCTTTATTTGGGGCCTTTGTGAGCCGTGCTGGTATCTCAACTGTTGACGTGTTGACTCCCAAGGTGTTTATCGGACTGCTTGTGGGGGCTATGCTTCCTTACTGGTTCTCTGCCATGACAATGAAGAGTGTAGGAAGTGCTGCTTTGAAGATGGTTGAAGAGGTTCGGAGGCAGTTCAACACTATTCCGGGTCTTCTAGAAGGTCTTGCCAAGCCAGATTATGCAACGTGTGTCAAGATCTCAACTGATGCTTCCATCAAGGAGATGATTCCACCCGGCGCCCTTGTCATGCTAACCCCACTTATTGTTGGAACCTTCTTCGGTGTTGAAACCTTGTCCGGTGTCCTAGCCGGTGCCCTTGTTTCTGGTGTCCAGATAGCAATATCTGCATCTAACACTGGTGGGGCATGGGATAATGCGAAGAAGTACATTGAGGCTGGTGCTTCGGGGCATGCAAGGACTCTGGGTCCGAAGGGTTCAGAGCCACACAAGGCGGCTGTGATCGGAGACACCATAGGGGACCCACTTAAGGATACTTCGGGACCTTCACTTAACATCCTTATAAAGCTCATGGCTGTGGAGTCTCTCGTCTTTGCTCCCTTTTTCGCTACTCATGGCGGCCTTCTTTTCAAGATCTTCTGA 2310 47.1 MGTTVLSDFATEILIPVCAVVGIAFSLVQWMLVSLVKLTPDRHSPADGSNNKKNGYNDYLIEEEEGVNDENDIVVKCAEIQNAISEGASSFLFTEYQYVGVFMVAFAILIFLFLGSVEGFSTKSRPCTYNPENVCKPALATALFSTVSFLLGAITSVLSGYLGMKVATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYVTINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALIVASISSFGIDHNFTAMCYPLLISSMGIIVCLITTLFATDFFEIKAVKEIEPALKNQLIISTVLMTLGIAIISWIALPPSFTIFNFGTQKVVKNWQLFLCVCVGLWAGLIIGFVTEYFTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLLEGLAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTFFGVETLSGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGASGHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1138676 1142850 + Conep17aG0024400.1 Cone17ag0241 455718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0241 769 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 759 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone17ag0241 769 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 767 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone17ag0241 769 PIRSF H+-PPtase 11 767 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone17ag0241 769 Pfam Inorganic H+ pyrophosphatase 70 754 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone17ag0241 769 NCBIfam V-type H(+)-translocating pyrophosphatase 11 764 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0241 Cone-Chr17:1138676 Cone3ag0838 Cone-Chr3:4287110 0 dispersed
Cone17ag0241 Cone-Chr17:1138676 Cone20ag1170 Cone-Chr20:7893649 0 wgd
Cone17ag0241 Cone-Chr17:1138676 Cone4ag0644 Cone-Chr4:3027210 0 wgd
Cone17ag0241 Cone-Chr17:1138676 Cone7ag0605 Cone-Chr7:2923857 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0241 K23025 - vvi:100256710 1378.23