Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0269 ATGCCGATTGATCGTGATTCTTCAGTTTCCGGCCAAACTGTATGCGTTACTGGCGCCGGAGGCTTCATTGGTTCTTGGATGGTGAAATTGCTGCTCCAGAAAGGCTACTCTGTCAGAGGAACTGTGAGAAATCCAGATGACCCGAAGAACAGTCATCTTAGAGTGCTCGAAGGAGCAGAGGAGAGGTTGACTCTATGTAAAGCTGATCTTCTTGATTTCGAGAGCCTCAAAGTAGCCATTAATGGCTGCGATGGTGTTTTCCACACCGCATCACCTGTCACTGATGATCCAGAACAAATGGTGGAGCCGGCGGTGAATGGAACCAAAAATGTGATAATGGCTGCAGCAGAAGCAAAAGTGCGCCGTGTAGTGTTCACGTCATCAATCGGTGCGGTCTATATGGACCCAAACCGGGGCCAAGACGAGGTGGTTGATGAGTCCTGTTGGAGTGATCTGGACTTCTGCAAGAACACCAAGAATTGGTATTGTTATGGGAAAACCGTGGCGGAGAGAGCGGCATGGGAGGTGGCTAGGGAGCAAGGGTTGGACCTAGTTGTGGTGAACCCGGTTCTGGTACTAGGGCCCTTGCTGCAATCCACCATCAATGCTAGCATTGTTCATATACTCAAGTACTTAACCGGCTCAGCCAAGACATATGCCAATTCTGTTCAGGCTTATGTACATGTTAGAGATGTGGCTCTAGCTCACATTCTCGTCTATGAGACTCCCTCTGCCTCTGGTCGATATCTTTGTGCTGAGAGCGTCCTTCACCGCGGCGAGGTGGTCAAAATTCTTGCCAAGTTCTTTCCGGAGTATCCCATCCCCACCAAGTGCTCGGATGAAGTGAACCCAAGGAAAAAGCCATACAAATTTTCTAACCAGAAGCTCAAGGACTTGGGAGTGGAGTTCACCACAGTGAAGCAGTGCTTATACGACACCGTTAAGTCCCTGCAGGAGAAGGGTCATCTCCAACCCCCAGCTCCTCCACAACAACAAGATTCAGTCCGGATTCAAACTTAA 1020 49.51 MPIDRDSSVSGQTVCVTGAGGFIGSWMVKLLLQKGYSVRGTVRNPDDPKNSHLRVLEGAEERLTLCKADLLDFESLKVAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIMAAAEAKVRRVVFTSSIGAVYMDPNRGQDEVVDESCWSDLDFCKNTKNWYCYGKTVAERAAWEVAREQGLDLVVVNPVLVLGPLLQSTINASIVHILKYLTGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVKILAKFFPEYPIPTKCSDEVNPRKKPYKFSNQKLKDLGVEFTTVKQCLYDTVKSLQEKGHLQPPAPPQQQDSVRIQT 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1269457 1272953 + Conep17aG0027200.1 Cone17ag0269 455746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0269 339 MobiDBLite consensus disorder prediction 325 339 - -
Cone17ag0269 339 CDD FR_SDR_e 14 301 - -
Cone17ag0269 339 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 316 IPR050425 GO:0016616(PANTHER)
Cone17ag0269 339 FunFam Cinnamoyl-CoA reductase 1 5 337 - -
Cone17ag0269 339 MobiDBLite consensus disorder prediction 320 339 - -
Cone17ag0269 339 Pfam NAD dependent epimerase/dehydratase family 14 246 IPR001509 -
Cone17ag0269 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 318 IPR036291 -
Cone17ag0269 339 Gene3D - 4 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0269 Cone-Chr17:1269457 Cone2ag0746 Cone-Chr2:33247355 1.65E-95 dispersed
Cone13ag0832 Cone-Chr13:7535910 Cone17ag0269 Cone-Chr17:1269457 1.66E-82 transposed
Cone17ag0269 Cone-Chr17:1269457 Cone20ag1144 Cone-Chr20:7783391 1.93E-237 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0269 K09753 - cit:102615114 588.186