Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0279 ATGGAGAGGAAGAAGTATCCGATCGGAGCTGAACATTATACTCTGTATGAGGAGGTTGGGCAGGGTGTCAGTGCTTCGGTTCACCGTGCTCTTTGTAAGCCTCTCAATGAGATAGTCGCCATCAAGATCCTCGACTTTGAACGCAGCAATTCTGATTTGAATAACATCTCCCGGGAAGCGCAAATCATGAACTTGGTCGACCACCCCAATATCCTTAAATCCAACTGCTCCTTTGTCAGTGATCATAGTCTGTGGGTTGTCATGCCGTACATGGCTGGGGGATCATGTCTCCACATATTGAAATCTTCTCATGCAAATGGTTTTGAGGAAGTAGTTATAGCAACTATATTGCGGGAGACATTGAAGGGCTTGGAGTATCTTCATTCTCATGGGCTCATACATCGAGATGTGAAAGCTGGAAATATTCTCCTTGATGCACGGGGGCATATTAAGTTGGGGGATCTTGGTGTATCTGCTTGCCTTTTTGATTCTGGTGATAGGCAGCGCACGAGGAATACATTTGTTGGGACGCCCTGCTGGATGGCACCTGAGGTTATGGAGCAACTACATGGTTATGACTTCAAGGCTGATATATGGTCTTTTGGTATAACTGCGCTGGAGCTTGCACATGGCCATGCTCCTTTTTCAAGGTATCCTCCAATGAAGGTGTTGCTGATGACCTTGCAAAATGCACCCCCTGGCCTTGATTATGAACGAGACAAGAAATTTTCGAAGTCTTTCAGGGAGATAATTGCTAGTTGTTTGGTTAAAGAACCTTCAAAACGGCCTTCTTCAAAGAAGTTGTTAAAGTATTCTTTTTTCAAGCAAGCCCGATCAAGTGATTATCTTGCACGGACCCTTTTGGAGGGGCTGCCTGCACTTGGTGACCGCATTAAAGCATTGAAGATAAAGGAAGAAGATATGCTAGCACAAAAGAAAATACCAGATGGGCAAATGGAAGAAATGTCACAGAACGAATATAAACGAGGAATTAGTAGCTGGAACTTCGATCTCGAAGATGTAAAGGCTCAGGCAGCCTTGATCCAGGATGGTTGTGATACTAGCTCTGATGGTAATCAAGGATGTAACTCAGCTTCCTCGAGTCCTCTGAATGTGCCAGAGAATGAAGCAATGCTGAACCAGTCAGCTCATCCTCCACTGATTGATTCAGCCAGTAATGAGGCAAAAGTCAGATGTGACAAATCTGATGATGAGTGTAAAGCCGCTAGTTCATGCTACGAACAACATATACAGAAATCTTCACCTCCTCGTGATCATTATGCAATCAATGAAGGTGAAAAGCCTAATACAGAAAGCAGTAAAGGAATTTTGGATAGCACAGGTAACCAGGGTCATAGAAAGGAGAATTCACAAGAAGCTAGCATACCACCTTCAAAAGGAGAGAGCATTGCAGGTCCTCAGGCAATAGATTGCTTGCTTTCTGAAGTTCCTTTGAAAGCAGCCAAGACATTAGCATCACAGAGCGAGGAACTTGATGAGAAGGCCAAAGCACCAGTTGTCCAGCAAAAAGGACGTTTCAAAGTCACGTCAGAGAATGTTGAGCTAGAAAAGGTCACACCATCCCCTGTACTTCAAAAGAGTCACAGCATGCAGGTGATTTCTTCCCAGCATACTCCTGTTCCTGTGCCATCAACTACTTCACCTATAGTACCTGACCTGACACCAACTCCCTCAAATTCTGTATTCCAAGCATTGCAGTCTCTTTTGCAGGCAAATATTGTTCAAAGGGATAATATTCTAAGTTTGATGAACCAACTTGCGAATGGTGACACTACAGGAGGGCTTACAGCTGCAATGGAGAAATCTATGCTCGAAGTGGCTCACGACAGGGAAAAGGATTTACTTAATGAAGTTTCTCATTTGCAATGGAGGCTTATATGTGCCCAAGGAGAGCTTCAAAAACAAAAAACCGACAGCAATGAGGTATACTTTACAGTACCCAATTAG 1968 43.9 MERKKYPIGAEHYTLYEEVGQGVSASVHRALCKPLNEIVAIKILDFERSNSDLNNISREAQIMNLVDHPNILKSNCSFVSDHSLWVVMPYMAGGSCLHILKSSHANGFEEVVIATILRETLKGLEYLHSHGLIHRDVKAGNILLDARGHIKLGDLGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSRYPPMKVLLMTLQNAPPGLDYERDKKFSKSFREIIASCLVKEPSKRPSSKKLLKYSFFKQARSSDYLARTLLEGLPALGDRIKALKIKEEDMLAQKKIPDGQMEEMSQNEYKRGISSWNFDLEDVKAQAALIQDGCDTSSDGNQGCNSASSSPLNVPENEAMLNQSAHPPLIDSASNEAKVRCDKSDDECKAASSCYEQHIQKSSPPRDHYAINEGEKPNTESSKGILDSTGNQGHRKENSQEASIPPSKGESIAGPQAIDCLLSEVPLKAAKTLASQSEELDEKAKAPVVQQKGRFKVTSENVELEKVTPSPVLQKSHSMQVISSQHTPVPVPSTTSPIVPDLTPTPSNSVFQALQSLLQANIVQRDNILSLMNQLANGDTTGGLTAAMEKSMLEVAHDREKDLLNEVSHLQWRLICAQGELQKQKTDSNEVYFTVPN 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1338830 1345043 - Conep17aG0028200.1 Cone17ag0279 455756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0279 655 MobiDBLite consensus disorder prediction 433 464 - -
Cone17ag0279 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0279 655 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Cone17ag0279 655 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 647 IPR047173 GO:0043539(InterPro)
Cone17ag0279 655 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag0279 655 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag0279 655 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Cone17ag0279 655 MobiDBLite consensus disorder prediction 352 372 - -
Cone17ag0279 655 MobiDBLite consensus disorder prediction 413 471 - -
Cone17ag0279 655 SUPERFAMILY Protein kinase-like (PK-like) 11 558 IPR011009 -
Cone17ag0279 655 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Cone17ag0279 655 CDD STKc_OSR1_SPAK 11 274 - -
Cone17ag0279 655 Gene3D Transferase(Phosphotransferase) domain 1 94 327 - -
Cone17ag0279 655 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Cone17ag0279 655 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0114 Cone-Chr11:504731 Cone17ag0279 Cone-Chr17:1338830 4.23E-190 dispersed
Cone11ag0941 Cone-Chr11:7685584 Cone17ag0279 Cone-Chr17:1338830 2.23E-243 dispersed
Cone17ag0279 Cone-Chr17:1338830 Cone18ag0623 Cone-Chr18:3194144 1.16E-248 dispersed
Cone17ag0279 Cone-Chr17:1338830 Cone20ag1129 Cone-Chr20:7711788 0 wgd
Cone17ag0279 Cone-Chr17:1338830 Cone7ag1037 Cone-Chr7:7980858 6.16E-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82251 PF00903 Glyoxalase 6.30E-11 CL0104 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0279 K08835 - cit:102627630 825.854