Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone17ag0291 | ATGATTCAGGGAAGTCCAGTAAACATTATAGTAGGATCACATGTTTGGGCCGAAGATCCTGAAGAAGCATGGATTGACGGTCAAGTCATCCAAATCACCGGAAAAGATGCCATCATAGTCACCCCAGATGGAAAAAAAATAATTGCAGACATTTCAAGTGTCTACCCGAAAGACACGGAAGCACCTCCATCCGGAGTTGATGACATGACCAAATTAGCCTACCTTCACGAGCCGGGTGTTCTTCACAATTTAGCCTGTCGATTTTCGCTTAATGAAATTTACACATACACAGGGAATATTCTAATAGCCGTCAATCCATTCCAAAGGCTTCCCCATTTATACGATATCCATATGATGGAGCAGTATAAAGGAGCCGTTTTCGGCGAGCTAAGTCCACACCTTTTTGCCGTTGCAGATACTTGCTATAGGGCGATGATTAATGAACAAGGAAGCCAGTCGATTTTAGTAAGCGGAGAGAGTGGAGCCGGTAAAACCGAAACAACCAAAATGCTTATGAGGTACTTGGCGTTTATGGGAGGCCGGTCTGGAACTGAAGGAAGAACTGTAGAACAACAAGTCTTAGAGTCCAATCCGGTCTTGGAAGCATTTGGAAATGCAAAAACAGTGAAGAACAACAATTCAAGTCGGTTCGGGAAATTTGTGGAGATTCAATTCGACAAGTACGGTAAGATTTCTGGGGCTGCGATTCGTACATACCTTCTAGAAAGATCACGAGTCTGTCAAGCTTCCGACCCGGAGAGAAACTACCATTGTTTCTACATGCTCTGCTCTGCCCCACCCGAGGATTTGAAGAAATTTAAGTTAGGAGATCCAAGACAGTTCCATTACCTTAATCAGTCAAACTGTTATGAAGTTGCAAATGTAGATGATGCTAGAGAGTATCTCGAGACCCGGAATGCCATGGATATTGTGGGGATTAGCCCTGATGAGCAGGATGCTATTTTTCGAGTGGTGGCCGCGATTCTACATCTGGGAAACATAAATTTCATGAAAGGGAAGGAAGTCGATTCTTCCAAACTGAAAGACGAGAAATCAAGCTTCCATCTTAAAACCGCAGCAGAGCTTCTCATGTGTGATGAGAAAGCTCTAGAAGATTCACTTTGTAAGAGAGTTATAGTGACTCCGGATGGTAACATTACGAAGCCGCTCGACCGGGACTCAGCAGCATTAAGTAGAGATGCCTTGGCTAAAACCATTTACTCTAGACTGTTTGATTGGATTGTGGATAAGATTAATAGTTCAATCGGGCAAGATCCTCATGCAGTAAGCCTAATTGGAGTGCTCGATATTTACGGATTTGAAAGCTTCAAGATTAACAGTTTCGAGCAGCTATGCATTAATTTAACAAATGAGAAGTTACAACAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAGGAGTACACTAAAGAGGAGATTAACTGGAGTTATGTGGAGTTTGTTGATAATCAAGATGTTTTGGATCTTATTGAAAAGAAACCCGGAGGTATAATTGCTCTGCTAGATGAAGCCTGTATGTTTCCAAAGTCGACCCACGAGACGTTTGCACAAAAAATGTATCAGACATATAAAGCACATAAGCGATTCAGCAAACCGAAACTTGCTCGAACCGACTTTACAATCAACCATTATGCTGGAGATGTGACATATCAAGCAGATCAATTCCTAGACAAAAACAAGGATTATGTTGTTGCAGAACATCAAGCATTATTAAATGACTCAGAATGTTCTTTCGTTGCTAATCTCTTCCCTCCACTAGCCGAAGAGACCTCAAAGCAATCCAAATTTTCCTCCCTTGGTAACCGGTTTAAGCAACAACTACAAGCCCTTATGGAGACATTAAGTACAACAGAACCGCATTACATCAGATGTGTAAAACCAAACACAGTCTTGAAGCCTGGAATCTTTGAAAACATCAATGTCTTGAACCAATTAAGGTGTGGGGGTGTATTAGAAGCTATCAGAATCAGTTGTGCAGGATATCCAACAAAGAGAACATTCGATGAGTTTTTGGACCGTTTTGGAATGCTAGCTCCTGATATTCTTGATGGTTCTGATGAAAAATCAGCATGTATTGCCATCTGTGACAAGAGGGGCTTGAAGGGATATCAGATGGGGAAAACAAAGGTGTTTCTTAGAGCAGGACAAATGGCAGAGTTGGATGCAAGAAGAACAGAAGTGTTGGCTAATGCTGTTAGAAAAATACAGAGGCAAATCCGAACATATCTCACCCGGAAAGAGTTCATTTTTCTTAGGAGGGCTACAATTCAAATGCAGAAACATTGGAGAGCACAACTTGCTCGTAATTTGTACAAACAGATGAGAAGGGAAGCTGCTTCGATCCATATACAGAAACATGCTCGTGCTTATTCTTCAAGAAAATCTTACAGGCAGATATTGGAATCAGCTATAGTTATTCAGACCGGTTTACGAGCAATGGCAGCTAGAAATGAATATAGACACAGAAGAAGAACAAATGCTGCAATCATTGCTCAGACTAGGTGGAGAAGGCTCTTAGCACTTTCTTCTTATAAGGAGCAAAAGAAGGCGACTCTTACTCTTCAATGCCTATGGCGATCCCGAGTCGCAAGGAAAGAGCTTAGAAAGCTAAAGATGGCTGCAAGAGAAACCGGGGCGCTCAAGGAGGCTAAGGACAAGTTGGAGAAGCGAGTCGAGGAGCTGACGTGGCGCTTGGACTTTGAAAAGCACTTGAGGATTGATCTCGAAGAAGCCAAAGGTCAAGAGATTGCAAAGTTGCAAAATGTACTAAGTGAAATGCAAAGAAAGTTGGAAGAAGCGAATGCAGGCATACTACATGAGAAAGAGGCAGCAAGACTTGCCATAGAGCAAGCTCCACCTGTCATTAAAGAAGTCCCAGTCGTTGACGAGGCCGAGCTGGAATTGCTGAGAAATCAAAATGATCAACTCGAGGATGAGATTAAAGAAATGAGAAGGAAAATAGAGGAGTTTGAAGAGAAGTATAGTGAAGTTGAGAAGGAGAGCCAAACAAGGCTTAAGGAAGCAGAAGAAGCAAAAATGAAGACAATGCAACTCCAACAGACTATTGATAGATTGGAATTGAATTTATCAAATCTCGAGTCCGAAAACCAGGTTCTACGCCAGCAAGCTTTGGTTACGTCTACAAATGAGGACCTTTCTGAAGAATTGAGAAACCTCAAAAGCAAGATCGAAAGCCTGGAGTCTGAGAATGAAATTCTCCGTAACCGCCCGGTAGCTATGGAACAGATAATAGTTAGTCCCAAAACTGAAACGAAGAGTCTTGACAATGGACATGAAGTCAAGGAAGAGCTTAAAAAAACTAAGGAACCACCTGTTGTCCAAGTCCTGGTTAAACAGAGCTCTCTTACAGATAGACAACAGGAAAGTCATGATATTCTGATAAAGTGTCTAATGGAAGACAAGAGATTCGACAAGAACAGACCAGTTGCCGCCGGCATAATCTACAAATCACTTCTTCAATGGAGATCATTTGAGGCGGAGAAAACAAACATTTTTGACCGGATTATTCACACAATCCGAACATGTATAGAGAGTCAAGAAAATGTAAGTGATCTTGCATACTGGCTTTCAACCACTTCAACCCTTTTATTCCTTCTACAAGTCACACTCAAGGCAAGCAATAACACAACCACTTCAGCTGCTTCTCATCGGACCCGAAGTTCTCCTTCTACCCTTTTCGGTCGAAAATATCAGGGCTTCCATTCAAACTCAATGGCCATTTCCGGGATTTCGAGTGGGTACAGTGCAATGGCAGTAAAATCGAATAATCAATCCAAAGTGGAAGCTAAGTACCCCGCTCTACTGTTCAAGCAACATCTTACGGCCTGTGTAGAGAAATTATACGGAATGATAAGGGACAGTTTGAAGAAAGAGATCAATCCATTCTTGCATCTTTGTATACAGGCACCGAGAACGATGAGGGCCAGATCGATAAGAGGATCATCGAAGAATATACAACAAGCATCAAATGTACATTGGAAGAGCATTGTAAATCAGCTTGATCAAACCTTGGAAATCTTGTCTGGAAACCAAGTTCCTCCTGTGATTTCTCGGAAAATCTTTACACAGGTTTTCTCATTCATAAATGTCCAGCTTTTCAATAGCTTGTTGCTTCGACGTGAGTGTTGCTCCTTCAGCAATGGAGAATATTTGAAGATTGGTATTCAAGACTTGGAGCAATGGTGTGCCAAAGCAACTGATCAGTTGTCCGGGACGTCTTGGGATGAACTTCAACATATCCGACAAGCTGTTGGATTTCTGGTTTTGCAGCAGAAATCGCAGAAATCCTTGGATGAAATTACAAATGAAATGTGCCCGATATTAAGCATTCAACAAATATACCGAATCGGAACTATGTTCTGGGACGATAAATATAAAACGCAGGGATTATCACCTGATGTAATTGGAAGAATGAGAGTGCTAATGGCGGAGGATTCAATTAACATTCCCAACAATTCTTTCCTTCTTGATGTCGATTCGAGCATACCCTTCACAATGGAGGAGATGTTCAGGACCTTTGATGATGTCGATTTATCGGATGTCAATCCCCCTCCTCTTATCCGACAAAGATCCGATTTCCACTTCCTATTGCAGCAAAATGACTGA | 4650 | 41.74 | MIQGSPVNIIVGSHVWAEDPEEAWIDGQVIQITGKDAIIVTPDGKKIIADISSVYPKDTEAPPSGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFQRLPHLYDIHMMEQYKGAVFGELSPHLFAVADTCYRAMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSGTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKYGKISGAAIRTYLLERSRVCQASDPERNYHCFYMLCSAPPEDLKKFKLGDPRQFHYLNQSNCYEVANVDDAREYLETRNAMDIVGISPDEQDAIFRVVAAILHLGNINFMKGKEVDSSKLKDEKSSFHLKTAAELLMCDEKALEDSLCKRVIVTPDGNITKPLDRDSAALSRDALAKTIYSRLFDWIVDKINSSIGQDPHAVSLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNDSECSFVANLFPPLAEETSKQSKFSSLGNRFKQQLQALMETLSTTEPHYIRCVKPNTVLKPGIFENINVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDILDGSDEKSACIAICDKRGLKGYQMGKTKVFLRAGQMAELDARRTEVLANAVRKIQRQIRTYLTRKEFIFLRRATIQMQKHWRAQLARNLYKQMRREAASIHIQKHARAYSSRKSYRQILESAIVIQTGLRAMAARNEYRHRRRTNAAIIAQTRWRRLLALSSYKEQKKATLTLQCLWRSRVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLDFEKHLRIDLEEAKGQEIAKLQNVLSEMQRKLEEANAGILHEKEAARLAIEQAPPVIKEVPVVDEAELELLRNQNDQLEDEIKEMRRKIEEFEEKYSEVEKESQTRLKEAEEAKMKTMQLQQTIDRLELNLSNLESENQVLRQQALVTSTNEDLSEELRNLKSKIESLESENEILRNRPVAMEQIIVSPKTETKSLDNGHEVKEELKKTKEPPVVQVLVKQSSLTDRQQESHDILIKCLMEDKRFDKNRPVAAGIIYKSLLQWRSFEAEKTNIFDRIIHTIRTCIESQENVSDLAYWLSTTSTLLFLLQVTLKASNNTTTSAASHRTRSSPSTLFGRKYQGFHSNSMAISGISSGYSAMAVKSNNQSKVEAKYPALLFKQHLTACVEKLYGMIRDSLKKEINPFLHLCIQAPRTMRARSIRGSSKNIQQASNVHWKSIVNQLDQTLEILSGNQVPPVISRKIFTQVFSFINVQLFNSLLLRRECCSFSNGEYLKIGIQDLEQWCAKATDQLSGTSWDELQHIRQAVGFLVLQQKSQKSLDEITNEMCPILSIQQIYRIGTMFWDDKYKTQGLSPDVIGRMRVLMAEDSINIPNNSFLLDVDSSIPFTMEEMFRTFDDVDLSDVNPPPLIRQRSDFHFLLQQND | 1549 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 1396636 | 1404783 | + | Conep17aG0029400.1 | Cone17ag0291 | 455768 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone17ag0291 | 1549 | Gene3D | - | 734 | 786 | - | - | |
| Cone17ag0291 | 1549 | Gene3D | - | 835 | 883 | - | - | |
| Cone17ag0291 | 1549 | Gene3D | - | 787 | 834 | - | - | |
| Cone17ag0291 | 1549 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 788 | IPR027417 | - | |
| Cone17ag0291 | 1549 | ProSiteProfiles | IQ motif profile. | 784 | 810 | - | - | |
| Cone17ag0291 | 1549 | CDD | MYSc_Myo11 | 78 | 721 | IPR036018 | - | |
| Cone17ag0291 | 1549 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 787 | 884 | IPR027417 | - | |
| Cone17ag0291 | 1549 | Gene3D | - | 254 | 312 | - | - | |
| Cone17ag0291 | 1549 | FunFam | unconventional myosin-Va | 835 | 882 | - | - | |
| Cone17ag0291 | 1549 | PRINTS | Myosin heavy chain signature | 198 | 225 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | PRINTS | Myosin heavy chain signature | 151 | 176 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | PRINTS | Myosin heavy chain signature | 94 | 113 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | PRINTS | Myosin heavy chain signature | 431 | 459 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | PRINTS | Myosin heavy chain signature | 484 | 512 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 314 | 603 | - | - | |
| Cone17ag0291 | 1549 | ProSiteProfiles | IQ motif profile. | 736 | 765 | - | - | |
| Cone17ag0291 | 1549 | SMART | MYSc_2a | 58 | 734 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | Gene3D | - | 441 | 625 | - | - | |
| Cone17ag0291 | 1549 | ProSiteProfiles | IQ motif profile. | 759 | 788 | - | - | |
| Cone17ag0291 | 1549 | PANTHER | MYOSIN | 14 | 1490 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cone17ag0291 | 1549 | FunFam | Myosin 2 | 314 | 429 | - | - | |
| Cone17ag0291 | 1549 | Coils | Coil | 878 | 912 | - | - | |
| Cone17ag0291 | 1549 | SMART | iq_5 | 735 | 757 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | SMART | iq_5 | 806 | 828 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | SMART | iq_5 | 758 | 780 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | SMART | iq_5 | 783 | 805 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | SMART | iq_5 | 854 | 876 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | SMART | iq_5 | 831 | 853 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | Pfam | IQ calmodulin-binding motif | 739 | 756 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | Pfam | IQ calmodulin-binding motif | 857 | 876 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | Pfam | IQ calmodulin-binding motif | 786 | 805 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | Pfam | IQ calmodulin-binding motif | 760 | 780 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0291 | 1549 | Gene3D | Kinesin motor domain | 67 | 664 | IPR036961 | - | |
| Cone17ag0291 | 1549 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 10 | 59 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | Coils | Coil | 917 | 951 | - | - | |
| Cone17ag0291 | 1549 | Coils | Coil | 974 | 1050 | - | - | |
| Cone17ag0291 | 1549 | CDD | MyosinXI_CBD | 1132 | 1515 | IPR037975 | GO:0007015(InterPro) | |
| Cone17ag0291 | 1549 | ProSiteProfiles | IQ motif profile. | 855 | 884 | - | - | |
| Cone17ag0291 | 1549 | ProSiteProfiles | IQ motif profile. | 809 | 836 | - | - | |
| Cone17ag0291 | 1549 | FunFam | Class V myosin | 441 | 583 | - | - | |
| Cone17ag0291 | 1549 | ProSiteProfiles | Myosin motor domain profile. | 64 | 733 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | Pfam | Myosin N-terminal SH3-like domain | 11 | 52 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | Pfam | DIL domain | 1367 | 1471 | IPR002710 | - | |
| Cone17ag0291 | 1549 | Coils | Coil | 1057 | 1084 | - | - | |
| Cone17ag0291 | 1549 | ProSiteProfiles | Dilute domain profile. | 1181 | 1492 | IPR002710 | - | |
| Cone17ag0291 | 1549 | Pfam | Myosin head (motor domain) | 66 | 721 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0291 | 1549 | SMART | DIL_2 | 1367 | 1474 | IPR002710 | - | |
| Cone17ag0291 | 1549 | FunFam | unconventional myosin-Va | 786 | 834 | - | - | |
| Cone17ag0291 | 1549 | FunFam | Myosin heavy chain | 254 | 309 | - | - | |
| Cone17ag0291 | 1549 | Gene3D | - | 669 | 731 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone17ag0291 | Cone-Chr17:1396636 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone17ag0291 | Cone-Chr17:1396636 | Cone17ag0949 | Cone-Chr17:7414370 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone17ag0291 | K10357 | - | csv:101207221 | 2560.41 |