Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag0342 | ATGGCCATGGCTGGGCGTATGAGATCGAGCCTTTCTCTCCTCAGCAAGTTTCTCAAATCCGATTCAGCATCCACTCAGAGATCCACCCTCGAACGAGCGCTACTATGCCCTACTTTCACCAATGCGGAGTCTTCCAGGAACTATGCCACCGCATCTGGGAAGAAGGAAGAAAAAGTGAAGGTCCCTCTGGCTCTGTATGGGGGTACTGGAAACTATGCGTCCGCCTTGTATCTTGCTGCAGTAAAAGCTAATGCACTGGACAAGGTTGAGTCTGAGCTTCTTGATCTTGTTGAGGCTATAAATGAAAGTCCCAGATTTTCTCAGTTCACGAAGGATCCAACTGTGCGTCCAGATGTTAGGGTCAATGCTATTAAAGAAATATCTGCTGAAGCTAAATTTTCAGAAGTTACAAAGAGTTTCTTGCTTGTGTTGGCTGCGAATGGAAGGCTGAAATTTGTAGACAGCATATCAAAGAGATTTCAGGAGTTAACAATGGCTCATAGGGGAGAAGTGAAAGCCATCGTGACAACGGTTATTCCTCTTCCAGCAGAAGAGGAGAAAGAACTGAAGGAGACACTGCAAGATATCCTTGGTCAAGGGAAGAAGGTTAAGCTTGAACAGAAGATTGATCCAAGAATTCTCGGCGGTCTAGTGGTGGAGTTTGGAGATAAGGTCTTCGACATGTCCATTAAGACCCGAGCACGCCAGATGGAGAGGTTCTTGCGAGAACCCATTAACATTGGCAACCTCTAG | 753 | 46.22 | MAMAGRMRSSLSLLSKFLKSDSASTQRSTLERALLCPTFTNAESSRNYATASGKKEEKVKVPLALYGGTGNYASALYLAAVKANALDKVESELLDLVEAINESPRFSQFTKDPTVRPDVRVNAIKEISAEAKFSEVTKSFLLVLAANGRLKFVDSISKRFQELTMAHRGEVKAIVTTVIPLPAEEEKELKETLQDILGQGKKVKLEQKIDPRILGGLVVEFGDKVFDMSIKTRARQMERFLREPINIGNL | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 1599672 | 1602230 | + | Conep17aG0034600.1 | Cone17ag0342 | 455819 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag0342 | 250 | ProSitePatterns | ATP synthase delta (OSCP) subunit signature. | 203 | 222 | IPR020781 | GO:0015986(InterPro)|GO:0016020(InterPro)|GO:0046933(InterPro) | |
Cone17ag0342 | 250 | NCBIfam | ATP synthase F1 subunit delta | 71 | 240 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cone17ag0342 | 250 | Hamap | ATP synthase subunit delta [atpD]. | 64 | 243 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cone17ag0342 | 250 | PANTHER | ATP SYNTHASE DELTA CHAIN | 1 | 244 | IPR000711 | GO:0000274(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0042776(PANTHER)|GO:0045261(PANTHER)|GO:0046933(PANTHER)|GO:0046933(InterPro) | |
Cone17ag0342 | 250 | Gene3D | - | 69 | 161 | IPR026015 | - | |
Cone17ag0342 | 250 | SUPERFAMILY | N-terminal domain of the delta subunit of the F1F0-ATP synthase | 69 | 170 | IPR026015 | - | |
Cone17ag0342 | 250 | PRINTS | ATP synthase delta subunit signature | 216 | 234 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cone17ag0342 | 250 | PRINTS | ATP synthase delta subunit signature | 201 | 216 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cone17ag0342 | 250 | PRINTS | ATP synthase delta subunit signature | 149 | 163 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cone17ag0342 | 250 | PRINTS | ATP synthase delta subunit signature | 138 | 149 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cone17ag0342 | 250 | PRINTS | ATP synthase delta subunit signature | 68 | 87 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cone17ag0342 | 250 | Pfam | ATP synthase delta (OSCP) subunit | 70 | 239 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0342 | Cone-Chr17:1599672 | Cone20ag0682 | Cone-Chr20:4212310 | 7.03E-12 | dispersed | |
Cone17ag0342 | Cone-Chr17:1599672 | Cone20ag1069 | Cone-Chr20:7462213 | 1.57E-155 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag0342 | K02137 | - | csv:101206351 | 342.043 |