Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0445 ATGGCTGGAGATACTCATGGCCCTAGCTCGAGGACTCTTCTTTGCAATGCCGGAGCTGGTGGTGCTGCTGGAGTTCTTGCTGCTACATTTGTGTGTCCTTTAGATGTTATCAAAACAAGGTTTCAGGTTCATGGAATCCCAGAGATTGGTAATGGAAGTGCTAAAGGAAGCCTTATAGTCGGTAGCTTGGAACAAATTTTTCAGAAAGAAGGCTTTCGTGGAATGTATCGTGGGCTCTCACCCACCATCCTGGCATTGCTTCCTAATTGGGCAGTTTATTTTACAGTGTATGAGCAGCTCAAATGCATCCTTTGCTCCAAAGATGAAAATCATAAACTTTCATTTGGTTCTCATATGATGGCTGCTTCTGGTGCTGGAGCTGCAGTGGCGTTTATCACAAATCCTCTTTGGGTTGTAAAGACTAGGCTTCAAACCCAAGGGATGAGACCAGGTGTTGTACCATATACAGGTACACTGTCTGCTTTGAGAAGGATAGCTCACATTGAAGGCATTCGAGGATTGTACAGTGGACTTGTGCCTGCTTTGGCTGGTATAAGTCATGTTGCAGTCCAATTTCCAACATACGAGAAAGTAAAAACTTATTTGGCTAGTAAAGATAACAGTACAACGGATAAACTCAGTGCAACTAATGTAGCCGTCGCCTCATCTGTCTCCAAAATATTTGCATCCTCTTTGACTTATCCACATGAGGTGGTTCGGTCAAGGCTCCAAGAACAAGGGCACCATTCGGAAAAACGGTATTCTGGTGTAATTGATTGTGTTAAGAAAGTTTTCCAACAAGAGGGCATACCGGGTTTTTACCGTGGATGTGCAACTAATCTTCTAAGGACCACCCCAGCAGCTGTAATAACACTTACCAGCTTTGAAATGATTCACCGCTTTCTAGTTACGCTATACTCTCCTGATCCACAGCCTCACACATTGCGAGGGTAG 954 44.13 MAGDTHGPSSRTLLCNAGAGGAAGVLAATFVCPLDVIKTRFQVHGIPEIGNGSAKGSLIVGSLEQIFQKEGFRGMYRGLSPTILALLPNWAVYFTVYEQLKCILCSKDENHKLSFGSHMMAASGAGAAVAFITNPLWVVKTRLQTQGMRPGVVPYTGTLSALRRIAHIEGIRGLYSGLVPALAGISHVAVQFPTYEKVKTYLASKDNSTTDKLSATNVAVASSVSKIFASSLTYPHEVVRSRLQEQGHHSEKRYSGVIDCVKKVFQQEGIPGFYRGCATNLLRTTPAAVITLTSFEMIHRFLVTLYSPDPQPHTLRG 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2088496 2091762 + Conep17aG0045400.1 Cone17ag0445 455922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0445 317 Gene3D Mitochondrial carrier domain 2 108 IPR023395 -
Cone17ag0445 317 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085(InterPro)
Cone17ag0445 317 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085(InterPro)
Cone17ag0445 317 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085(InterPro)
Cone17ag0445 317 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085(InterPro)
Cone17ag0445 317 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085(InterPro)
Cone17ag0445 317 FunFam NAD+ transporter 111 306 - -
Cone17ag0445 317 SUPERFAMILY Mitochondrial carrier 13 297 IPR023395 -
Cone17ag0445 317 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 11 305 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(PANTHER)|GO:0055085(InterPro)
Cone17ag0445 317 Gene3D Mitochondrial carrier domain 109 306 IPR023395 -
Cone17ag0445 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Cone17ag0445 317 Pfam Mitochondrial carrier protein 213 303 IPR018108 -
Cone17ag0445 317 Pfam Mitochondrial carrier protein 12 105 IPR018108 -
Cone17ag0445 317 Pfam Mitochondrial carrier protein 112 204 IPR018108 -
Cone17ag0445 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 301 IPR018108 -
Cone17ag0445 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Cone17ag0445 317 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0445 Cone-Chr17:2088496 Cone6ag0430 Cone-Chr6:2086342 5.41E-139 dispersed
Cone17ag0445 Cone-Chr17:2088496 Cone20ag0967 Cone-Chr20:6902718 2.10E-216 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0445 K15115 - vvi:100258843 515.383