Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0468 ATGGCTGGAAGTAATGAAGTCAACATCAGTGAATCGAAGAAAGTTGTCCCGCTTAACACATGGGTCCTCATCTCCAACTTCAAGCTAGCCTATAATCTCCTACGCCGACCCGATGGAACCTTTAACCGTGAGCTAGCCGAGTTTCTCGAACGGAAGGTTCCGGCCAATACCATTCCAGTTGATGGGGTCTTCTCCTTTGATCACGTGGACCGTCCCTCAGGCCTTCTCAATCGGGTCTACCAACAGGCCCCTGATAATGAGACCCATTGGGGTATTGTAGAGCTCCAAAAGCCCTTGAGCCTAACCGAGGTCGTTCCTGTAATTATCTTCTTCCATGGCGGAAGCTTTACTCATTCCTCAGCCAATAGCGCGATTTATGACATGTTTTGCCGTCGATTGGTTAAAAGTTGTAAGGCTGTGGTTGTTTCGGTAAATTACCGTCGTGCCCCTGAGCATCGATACCCTTGTGCTTATGATGATGGATGGGCGGCGCTCAAATGGGTTAAATCCCGGACTTGGCTTCAAAGTGGTTCCGAAGGTAAAGTTTATGTGTATTTGGCGGGAGATAGTTCGGGTGGGAACATTGTCCACCATGTGGCGGTCAGGGCAGCTAAAGAAGATGTGGAGGTGTTGGGGAATATTCTTCTTCATCCGCTGTTTGGAGGGCAAAAGAGGACCGAATCTGAGAAAAGATTGGATGGGAAATACTTTGTTCATCTGCCTGACCGTGATTGGTATTGGCGGGCTTATCTGCCCGAAGGTGAAGATCGGGACCATCCGGCTTGTAACATTTTCGGCCCAAGGTCCGAAGACATTAAGGGGCTCAAGTTCCCGAAAAGCCTAGTTGTGGTGGCAGGTTTTGATCTAATACAAGATTGGCAACTTGATTATGTAAAAGGGTTGAATCTATCTGATCATAAAGTGAAGCTTCTCTTCCTCGAAAAGGCGACTATTGGGTTCTACTTCTTGCCGAACAATGAACATTTCTACTGCCTAATGGACGAGATAAACAGCTTTGTGAATGAATCCTCCTAA 1035 47.34 MAGSNEVNISESKKVVPLNTWVLISNFKLAYNLLRRPDGTFNRELAEFLERKVPANTIPVDGVFSFDHVDRPSGLLNRVYQQAPDNETHWGIVELQKPLSLTEVVPVIIFFHGGSFTHSSANSAIYDMFCRRLVKSCKAVVVSVNYRRAPEHRYPCAYDDGWAALKWVKSRTWLQSGSEGKVYVYLAGDSSGGNIVHHVAVRAAKEDVEVLGNILLHPLFGGQKRTESEKRLDGKYFVHLPDRDWYWRAYLPEGEDRDHPACNIFGPRSEDIKGLKFPKSLVVVAGFDLIQDWQLDYVKGLNLSDHKVKLLFLEKATIGFYFLPNNEHFYCLMDEINSFVNESS 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2236510 2238612 - Conep17aG0047900.1 Cone17ag0468 455945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0468 344 SUPERFAMILY alpha/beta-Hydrolases 83 342 IPR029058 -
Cone17ag0468 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787(InterPro)
Cone17ag0468 344 PANTHER ARYLACETAMIDE DEACETYLASE 37 326 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Cone17ag0468 344 FunFam Gibberellin receptor GID1 1 342 - -
Cone17ag0468 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Cone17ag0468 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787(InterPro)
Cone17ag0468 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0468 Cone-Chr17:2236510 Cone1ag1766 Cone-Chr1:58324334 6.38E-188 dispersed
Cone11ag0881 Cone-Chr11:7276256 Cone17ag0468 Cone-Chr17:2236510 7.51E-208 wgd
Cone17ag0468 Cone-Chr17:2236510 Cone18ag0676 Cone-Chr18:3596874 3.58E-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0468 K14493 - csv:101219912 605.905