Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone17ag0473 | ATGGCCATCCAAGAGCTATCCATATGGCTACCTCTTCTCCTCCTTCTATCTCTCATTTTTCTCAAAAAAATGAAGAAACATGAACAAAAGAACTTCCCACCAAGCCCTCCAAAGCTTCCCATTATTGGTAACCTGCACCAGATAGGAGCCTTGCCTCACTCCTCTATGTACGATCTCTCCAAGATATATGGCCCAATCATGTCCTTACAACTCGGTCGCTTAAGGACTCTAATAATCTCCTCAGCTGAAGTTGCCAAGGATGTCTTAAAAATCCATGATCTTGCTTGTTGTAGTAGACCCTCACTCGCAGGTTCAGGAAGACTCACATATAACTATCGTGATATGGCATTTTCACCTTATGGTGCTTATTGGCGAGAGGTAAGAAAAATATGTGTCCTCGAGCTGTTTAGTTTGAAGAGGGTGAGATCTTATCAAACTGTTCGAAAAGAAGAACTCAATTCGCTTATTGAATCGATAAACGATAGTGCAAAAAGTAATACTCCAGTTGATCTTACCGAGAAGCTATTTTCCCTAACGGCTAGTATTATTTATAGGATTGCTTTTGGGAGGAGATTTAAAACAAGTGATTTTAAACACCATAAGACAGTTCATGGCGTTCTTCATGAAACTGAGGCCGTGATGGGGAGTTTTCAAGCTTCTGAGTACTTTCACCCTTTTGTGGGATGGATTATTGATAGTCTAAGAGGTCAAAATCAAAGGCTTGAAAGGGTTTTTGACGAGTTGGATACTTGTTTCCAACAGATGATTGATGATCATCTCGATCCGGCTTGGATTAAACCAGATCAAGAAGATATTATTGATGTGCTCTTGGGAGTAGAGAAAGAGCATACTGAAGTTGGTGTTGCTTTGATTGGCAAAGATAACATCAAGGCTATCCTTCTGAACATATTTTTAGGTGGAATAGACACCGGTGCAATCACAATAGTGTGGGCAATGACAGAATTAGTTAGAAACCCTAAACTAATGAGTAAAGCGCAACAAGAAATCAGAATTCATTTAGCGAAAAAAGAAGGAAAATTCACCGAAGATGATATCGACCAACTTCTATATCTAAAGTTGATAGTCAAAGAAACACTTAGACTTCACCCTCCAGCGCCATTGCTGCTTCCAAGACAAACCATGTCAAGTTGCAACTTACAAGGCTATGAAATCCCACCAAATACACTAATCCAAGTGAACGCTTGGGCGATCGGAAGGGACCCTCAGTACTGGAGAAACCCGGAAGAATTTATTCCGGAGAGGTTTGAAGATAGCTCGGTTGATTATAAAGGGCAGGATTATGAGTTCTTGCCATTTGGAGGTGGTAGAAGAATCTGCCCTGGAATGTACATGGCAACAACAATGGTTGAGCTTGTTTTGGCGAACTTGTTGTACTGGTTTGATTGGGAGTTGCCTCATGGAATGAAACCTGAGGATTTGAATATCGAAGAAAGTGTTGGTCGCAGCTTGACTCTTTCAAAAAAGGAACTCCTCATTCTTACGCCCTTAATTCCAGGCTTATCAAGATGA | 1530 | 40.85 | MAIQELSIWLPLLLLLSLIFLKKMKKHEQKNFPPSPPKLPIIGNLHQIGALPHSSMYDLSKIYGPIMSLQLGRLRTLIISSAEVAKDVLKIHDLACCSRPSLAGSGRLTYNYRDMAFSPYGAYWREVRKICVLELFSLKRVRSYQTVRKEELNSLIESINDSAKSNTPVDLTEKLFSLTASIIYRIAFGRRFKTSDFKHHKTVHGVLHETEAVMGSFQASEYFHPFVGWIIDSLRGQNQRLERVFDELDTCFQQMIDDHLDPAWIKPDQEDIIDVLLGVEKEHTEVGVALIGKDNIKAILLNIFLGGIDTGAITIVWAMTELVRNPKLMSKAQQEIRIHLAKKEGKFTEDDIDQLLYLKLIVKETLRLHPPAPLLLPRQTMSSCNLQGYEIPPNTLIQVNAWAIGRDPQYWRNPEEFIPERFEDSSVDYKGQDYEFLPFGGGRRICPGMYMATTMVELVLANLLYWFDWELPHGMKPEDLNIEESVGRSLTLSKKELLILTPLIPGLSR | 509 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 2277104 | 2279002 | + | Conep17aG0048400.1 | Cone17ag0473 | 455950 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone17ag0473 | 509 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone17ag0473 | 509 | PANTHER | CYTOCHROME P450 71B11-RELATED | 14 | 502 | IPR050193 | - | |
| Cone17ag0473 | 509 | Gene3D | Cytochrome P450 | 18 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | SUPERFAMILY | Cytochrome P450 | 33 | 482 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | Pfam | Cytochrome P450 | 33 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | CDD | CYP71-like | 63 | 498 | - | - | |
| Cone17ag0473 | 509 | PRINTS | P450 superfamily signature | 437 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag0473 | 509 | FunFam | Cytochrome P450 83B1 | 19 | 501 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone17ag0473 | Cone-Chr17:2277104 | Cone20ag0903 | Cone-Chr20:6532244 | 6.61E-276 | dispersed | |
| Cone17ag1086 | Cone-Chr17:8091858 | Cone17ag0473 | Cone-Chr17:2277104 | 1.57E-208 | transposed | |
| Cone17ag0473 | Cone-Chr17:2277104 | Cone20ag0900 | Cone-Chr20:6520804 | 7.76E-270 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone17ag0473 | - | - | - | 0.0 |