Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0501 ATGGTCGATCGTCTTGCGTTTGGCATTCCAGAGTCTCGGAATTGTGTACGGGGATATCGGAACATCGCCTCTATACTTAAATATGTCGTCTTTGTCTTAAAGGCAACGGATAACGGTGAAGGAGGAACGTTTGCGTTGTATTCCCTTATATGCCGACATGCAAAGATCAGTTTGGTCCCGAATCAACAAGTAGAAGACACTGACGTATCGAATTACAAGCTTGAGTTACCGAGCAAGGGTGTTGAGAGAGCGTCAGATCTTAAAAGTCTGCTGGAGAATTGCCACTTTGTTAAGGTTTTTCTTCTCTTTGCTACAATGCTTGGAACATCCATGGTTATTGGTGATGGTATCCTCACTCCTTGCATTTCAGTTTTATCAGCTGTTGGAGGTATCAAGGGAGCTTCACCTTCAATGACGCAAGATGTTGTCGTGTGGATATCGGTGGCAATCTTGTTTCTGTTGTTTGTGATACAAAGATTCGGGACCGAAAAAGTTGGTTATAGTTTTGCTCCGATCATCTTTATCTGGTTTTTATTCATTGCTCTGATCGGCCTCTACAATTTCATTAACTACGATCCATTAGTTATCAAAGCTCTAAACCCGTATTACATCATAGACTATTTCCAAAGAAACAAAAAGCAGGCCTGGATTTCACTTGGGGGCACGGTTTTAGCCACGACCGGAGCCGAAGCTCTATTTGCTGACGTTGGTCACTTCTCGGTAAAGTCCATACAAATAAGCATGTGTGGGGTCGTCTATCCCGCTCTCGTTCTTGCATACACAGGACAGGCCTCCTTTCTCCGAAAGAACAATGATCTGGTCTCGGATGCTTTCTTCAAATCCATACCCAAGCCGGTTTATTGGCCGATGTTTGTGGTTGCAGTATTGGCGGCGATCATAGCAAGTCAAGCCTTAATATCAGGGACATTCTCGATTATTCAACAATCCCTCTCATTAGGGTGTTTCCCTACTGTAAAAATTGTGCACACTTCTCCTAAATATGAAGGACAAGTTTACATTCCAGAAGTCAATTACATTCTGATGATTACATGTTTGATAATCACACTAACATTTAGAGACACCATTACTATCGGCAATGCCTACGGTCTGGCAGTGGTATTTGTGATGTTTCTTACATCAAGCTTCTTGATCCTCATCATGATCATGATATGGAAGTCCCACATAATATTCATACTCATTTATGTTATCGTAATCTGCACGATTGAGCTAGTTTATCTAAGTGCAGTCCTATATAAATTCCCAGAAGGAGGATATCTTCCTTTGGCTTTTGCAGTTGTTCTCATGACCGTGATGTTTGTTTGGAACGATGTTTTTCGCAGAAAATATACTTACGAACAAGAAAACGGGATATCTCAAGTTAAACTCAAGGAGGAAATTGCTAAAAACGTTAAAATTTGTAGGGTACCTGGCCTTGCATTGTTTTACTCTGAACTTGTTCAAGACATCCCTCCAATTTTCAAACATTATATTGATAATGTCCCCACCTTACACGAAGTCCTTGTTTTTCTGACCATTAAATCCTTGCCTGTAAGTAAAGTTCCTGGCGAAGAGCGCTTCTTCTTCCAAATAATCGAGCTGAAAGAATTCAACGTATTTCGATGTATTGCTCGGTATGGTTATACAGATGTCCGTAATGAGAAACAAGCTTTTGAGAGTGTACTGATTGAGAAGTTGAAGGAGTTTATGAAGAATGAATACTACATGTATTCCGGGGGTGATGTTGGGTCCCTCGGGCAGAAAGAAGAGTTACAGAAAGAGATCGAGGTGGTGGCGAAAGCATATAGTGATGGTGTTGTTCATTTTGTGGGTGAGAATGAAATAGTTGCCAGGAAAGGAGCAAATCTGGCGAGGAGGATTTGGATTGATTATTTCTATAACATCTTGAAGAGGAATTTGAGACAGTGTGAAAGGGTTTTTGATATTCCTCAAGAGCGAATGCTAAAAGTAGGCATGACTTATGAGCTTTAA 1989 40.93 MVDRLAFGIPESRNCVRGYRNIASILKYVVFVLKATDNGEGGTFALYSLICRHAKISLVPNQQVEDTDVSNYKLELPSKGVERASDLKSLLENCHFVKVFLLFATMLGTSMVIGDGILTPCISVLSAVGGIKGASPSMTQDVVVWISVAILFLLFVIQRFGTEKVGYSFAPIIFIWFLFIALIGLYNFINYDPLVIKALNPYYIIDYFQRNKKQAWISLGGTVLATTGAEALFADVGHFSVKSIQISMCGVVYPALVLAYTGQASFLRKNNDLVSDAFFKSIPKPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLSLGCFPTVKIVHTSPKYEGQVYIPEVNYILMITCLIITLTFRDTITIGNAYGLAVVFVMFLTSSFLILIMIMIWKSHIIFILIYVIVICTIELVYLSAVLYKFPEGGYLPLAFAVVLMTVMFVWNDVFRRKYTYEQENGISQVKLKEEIAKNVKICRVPGLALFYSELVQDIPPIFKHYIDNVPTLHEVLVFLTIKSLPVSKVPGEERFFFQIIELKEFNVFRCIARYGYTDVRNEKQAFESVLIEKLKEFMKNEYYMYSGGDVGSLGQKEELQKEIEVVAKAYSDGVVHFVGENEIVARKGANLARRIWIDYFYNILKRNLRQCERVFDIPQERMLKVGMTYEL 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2483019 2485715 - Conep17aG0051500.1 Cone17ag0501 455978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0501 662 Pfam K+ potassium transporter integral membrane domain 23 459 IPR053951 -
Cone17ag0501 662 NCBIfam potassium uptake protein 23 661 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone17ag0501 662 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 661 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cone17ag0501 662 Pfam K+ potassium transporter C-terminal domain 476 662 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0857 Cone-Chr11:7105738 Cone17ag0501 Cone-Chr17:2483019 0.00E+00 dispersed
Cone17ag0501 Cone-Chr17:2483019 Cone18ag0700 Cone-Chr18:3760446 0.00E+00 dispersed
Cone17ag0500 Cone-Chr17:2478399 Cone17ag0501 Cone-Chr17:2483019 5.16E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0501 K03549 - mtr:11442031 872.463