Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0506 ATGGCAAGCATCAAGGTTCATGGAACCCCTTTCTCCCCCGCAACAGCTAGAGTTCTTTGCGTCCTAGTTGAGAAAGAGTTGGAGTATGAGCTTGTCCCTGTGGACTTGAGATCTGGCGAGCATAAGAAGGAACCCTTCATTTCTATCAACCCATTTGGTCAAGTTCCTGGTTTTGAAGATGGAGAACTAAAGCTCTTTGAATCCAGGGCAATCACACAGTACATTGCTCATGCTTATTCTGACAAAGGAACCAATTTGATAGCCATTGAACCAAAGAAAATGGCATTAGTAGGAACATGGGTGGAGGTGGAGGCGCACCACTTCGACCAACCAGCATCAAAACTGACATGGGAGCTGGCCATAAAGCCCATGTTCGGAATGGGCGAACCGGATGCAGCAGTGGTAGCGGAAAATGAAGCCAAATTGGGGTCGGTTCTAAATGTGTATGAGAAGCAGCTAAGCAAAGCAAAATACTTGGCTGGTGATTTCTACTCCTTGGCAGATCTTCATCATGTTCCTCATTTGAGCTACTTGATAGGGACTGAAGCGAAGAAGTTGTTCGAGTCCCGCCCTCGTGTTAACGCATGGGTGGGTGAGATTTTGGCGAGACCAACTTCGGCCAAAGTGGTTGGCATGAGAGTTAAGCACTAA 651 47.16 MASIKVHGTPFSPATARVLCVLVEKELEYELVPVDLRSGEHKKEPFISINPFGQVPGFEDGELKLFESRAITQYIAHAYSDKGTNLIAIEPKKMALVGTWVEVEAHHFDQPASKLTWELAIKPMFGMGEPDAAVVAENEAKLGSVLNVYEKQLSKAKYLAGDFYSLADLHHVPHLSYLIGTEAKKLFESRPRVNAWVGEILARPTSAKVVGMRVKH 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2510457 2511433 + Conep17aG0052000.1 Cone17ag0506 455983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0506 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 212 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cone17ag0506 216 CDD GST_N_Phi 4 77 - -
Cone17ag0506 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cone17ag0506 216 CDD GST_C_Phi 92 210 IPR034347 -
Cone17ag0506 216 Gene3D - 90 214 - -
Cone17ag0506 216 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Cone17ag0506 216 SFLD Main.5: Phi-like 1 212 - -
Cone17ag0506 216 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Cone17ag0506 216 SUPERFAMILY GST C-terminal domain-like 74 214 IPR036282 -
Cone17ag0506 216 Pfam Glutathione S-transferase, C-terminal domain 117 204 IPR004046 -
Cone17ag0506 216 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Cone17ag0506 216 FunFam Glutathione S-transferase F2 3 87 - -
Cone17ag0506 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 216 IPR010987 -
Cone17ag0506 216 Gene3D Glutaredoxin 2 87 - -
Cone17ag0506 216 FunFam Glutathione S-transferase F2 89 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0504 Cone-Chr17:2499495 Cone17ag0506 Cone-Chr17:2510457 7.86E-155 dispersed
Cone17ag0506 Cone-Chr17:2510457 Cone20ag0934 Cone-Chr20:6704638 1.71E-149 dispersed
Cone17ag0506 Cone-Chr17:2510457 Cone17ag0513 Cone-Chr17:2535745 1.17E-122 proximal
Cone17ag0505 Cone-Chr17:2508306 Cone17ag0506 Cone-Chr17:2510457 1.08E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0506 K00799 - csv:101212771 293.893