Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0612 ATGGCAAAAGAACAACTAAATGTTCTAAATGCTCTTGACTCAGCTAAAACGCAATGGTATCACTTCACTGCAATTATCATTGCTGGAATGGGCTTCTTCACAGATGCTTATGATCTCTTTTGCATATCCCTTGTCACCAAATTACTTGGCCGAATATATTACCACGTCGACGGCTCATCCAAACCCGGCTCTTTACCTGCCAATGTCTCAGCTGCTGTAAACGGAGTGGCGTTCTGTGGGACCCTCTCAGGACAGCTCTTCTTTGGCTGGCTCGGTGACAAAATGGGCCGAAAAAAGGTCTACGGGATGACCCTTTTACTCATGGTCATATGCTCAGTTGCTTCGGGCCTTTCATTTGGCAATCACCCTAAAGCCGTAATAACAACCCTTTGTTTCTTTCGGTTCTGGCTAGGGTTTGGAATCGGTGGGGATTACCCACTTTCCGCAACGATAATGTCAGAGTATGCGAATAAGAAGACAAGAGGAGCCTTCATTGCTGCTGTGTTTGCCATGCAAGGGTTTGGTATTCTAGCTGGGGGTATATTTGCAATTATTGTTGCAGCCATATTCAAAGCCAGGTTTGATTCCCCACCTTATGAAGTTGATCCAATAGGCTCAACTGTCCCACAAGCTGATTACATTTGGAGAATCATTCTAATGGTAGGAGCATTGCCTGCTGCTCTAACATACTATTCGAGGTCGAAAATGCCAGAGACGGCCCGTTATACAGCTCTTGTTGCTAAGAATGTCAAGCAAGCCGAATCCGACATGTCAAAGGTTTTACAGACGGATATTGAAGCAGATAACCCGCAAGAACCTAAGCTCTCTGAGGAAAATACTTTCGGTTTGTTTTCTAAGGAATTTCTCCGGCGGCATGGACTTCACTTGCTCGGAACATCAACAACTTGGTTTTTGCTTGACATTGCTTTCTATAGCCAAAACTTGTTCCAAAAGGATATTTTCTCAGCCATTGGATGGATTCCTCCAGCGAAGACAATGAGTGCGATTGAGGAGGTTTATAGAATAGCTAGGGCGCAAACGCTTATTGCTCTATGTAGTACTGTTCCGGGGTACTGGTTCACGGTAGCTTTGATCGACCGGATGGGAAGGTTTGCAATCCAATTAATGGGCTTTTTCTTTATGACGGTGTTTATGTTTGCGCTAGCCATTCCTTACCATCACTGGACCAAAGCGGCAAACCGAATCGGGTTTGTAGTAATTTACTCTCTGACTTTTTTCTTTGCAAATTTCGGGCCGAATGCCACCACGTTTGTTGTGCCAGCAGAGATTTTTCCCGCGAGGTTCCGGTCAACTTGTCACGGAATATCAGCTGCTTCTGGGAAGTTGGGGGCAATTGTGGGAGCATTTGGGTTCTTGTATCTGGCTCAAAGTAAAGATAAAGCGAAGGCAGAAGCAGGGTATCCAGCAGGTATAGGGGTGAAAAATTCACTTATTCTCTTGGGAGTTGTTAACTTGTTAGGAATGGCTTTTACTTTCTTAGTTCCAGAATCGAAGGGGAAATCATTGGAAGAGATATCAGGTGAGAATGAATCTAATGCTGAAGAAGATGCAATAGCAGTAGAAACTGACCGGCGTCAATCTTGA 1605 44.61 MAKEQLNVLNALDSAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGSSKPGSLPANVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLLLMVICSVASGLSFGNHPKAVITTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFAIIVAAIFKARFDSPPYEVDPIGSTVPQADYIWRIILMVGALPAALTYYSRSKMPETARYTALVAKNVKQAESDMSKVLQTDIEADNPQEPKLSEENTFGLFSKEFLRRHGLHLLGTSTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMSAIEEVYRIARAQTLIALCSTVPGYWFTVALIDRMGRFAIQLMGFFFMTVFMFALAIPYHHWTKAANRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKAKAEAGYPAGIGVKNSLILLGVVNLLGMAFTFLVPESKGKSLEEISGENESNAEEDAIAVETDRRQS 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3378888 3380492 - Conep17aG0063000.1 Cone17ag0612 456089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0612 534 SUPERFAMILY MFS general substrate transporter 12 513 IPR036259 -
Cone17ag0612 534 Pfam Sugar (and other) transporter 26 513 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone17ag0612 534 FunFam Inorganic phosphate transporter 1-6 20 526 - -
Cone17ag0612 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 511 - -
Cone17ag0612 534 NCBIfam phosphate:H+ symporter 11 515 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cone17ag0612 534 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
Cone17ag0612 534 CDD MFS_PhT 25 505 - -
Cone17ag0612 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 506 IPR020846 GO:0022857(InterPro)
Cone17ag0612 534 MobiDBLite consensus disorder prediction 510 534 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0612 Cone-Chr17:3378888 Cone7ag0321 Cone-Chr7:1397719 1.77E-305 dispersed
Cone17ag0612 Cone-Chr17:3378888 Cone17ag0613 Cone-Chr17:3385898 3.80E-308 tandem
Cone15ag0159 Cone-Chr15:769569 Cone17ag0612 Cone-Chr17:3378888 5.07E-91 wgd
Cone17ag0612 Cone-Chr17:3378888 Cone20ag0800 Cone-Chr20:5678006 6.50E-168 wgd
Cone17ag0612 Cone-Chr17:3378888 Cone4ag0326 Cone-Chr4:1480205 2.94E-302 wgd
Cone17ag0612 Cone-Chr17:3378888 Cone4ag1129 Cone-Chr4:9741679 0 wgd
Cone17ag0612 Cone-Chr17:3378888 Cone7ag0999 Cone-Chr7:7720701 2.34E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0612 K08176 - mdm:103412247 890.952