Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0613 ATGGGAGAGGCACAGTTAGATGTGCTAAATAAGCTTGACGTAGCAAAAACACAATGGTATCACTTCAGTGCCATTGTCATTGCTGGAATGGGCTTCTTCACAGATGCCTACGATCTCTTTTGCATATCTCTTGTCACTAAATTACTTGGCAGAATATATTACCACGTAGATGGCTCGCCGAAACCCGGCTCACTACCTCCTAGAGTATCAGCCGCAGTGAATGGTGTAGCCTTCTGTGGGACCCTCTCCGGACAGCTCTTCTTTGGCTGGCTCGGTGACAAATTGGGTTGGAAAAAAGTCTATGGCTTGACCCTTTTACTCATGATCATGTGCTCTCTTGCTTCAGGCCTTTCCTTAGGGCATAGTTCCCAATCCGTCATGACAACTCTTTGTTTCTTTCGGTTTTGGCTAGGGTTCGGAATCGGAGGTGACTACCCACTTTCCGCCACTATAATGTCGGAATATTCTAACAAGAGAACTCGAGGAGCTTTCATTGCCGCCGTTTTTGCCATGCAAGGGTTTGGAATTTTAACTGGGGGTCTGTTTGCAATTGTGATGGCGTATGTTTTTCAGGCAAAGTTCAACAGCCCAGCTTACAAAGTCGATCCAATCGGATCAACGGTCCCACAAGCCGACTATTTATGGAGGATAATTCTAATGGCCGGAGCAATTCCTGCTACTTTAACCTTCTACTGGCGCCTAAACATGCCAGAAACCGCACGGTATACTGCACTCGTTGCAAAGAATGCGGAACAAGCCGCAAATGATATGTCCAAGGTATTGCAAGTTGCCATTGAAGCCGAGCCACAAAAAGTTGAGGTGATGAATTCTAGTGTGGCTAATTCGTTTGGTTTGTTCTCTAAAGAGTTTGTCAAAAGACATGGGCTTCACTTGCTTGGAACCACAAGTACTTGGCTCTTACTTGATATCGCGTATTACAGTCAAAATCTATTCCAAAAGGACATATTTAGTGCAATTGGATGGATCCCATCACCAGAGAGTATGAATGCAATTACTGAGCTCTATAAAATTGCAAGAGCACAAACACTCATAGCTCTATGTAGTACTGTTCCTGGGTATTGGTTCACAGTTGCTTTGATTGATAAAATTGGAAGATTCAAAATTCAACTGATGGGATTTTTCTTCATGACAGTGTTTATGTTTGCATTGGCTATTCCTTACAGCTATTGGACTAATGATAAGAGTCACTTAATTGGGTTTGTGGTGATTTATTCATTGACTTTCTTCTTTGCTAATTTCGGACCAAATGCTACCACATTTGTTGTCCCGGCTGAGATTTTTCCGGCAAGGTTAAGGTCTACATGTCATGGGATTTCTGCAGCATCCGGTAAGCTTGGTGCTATAGTGGGTGCTTTCGGGTTCTTGTATTTGGCTCAGAATCAGGACAAAGCCAAGGCAGATGCAGGGTTTCCTGCCGGAATTGGAGTAAGGAATTCACTCATTGTGTTGGGTGTGGTTAACTTGTTTGGTATGGCTTTAACATTTCTAGTACCTGAATCCAATGGGAAATCCTTGGAGGAAATGTCAGGTGAGAATGTTGAAGTTGAAAGATAG 1575 43.37 MGEAQLDVLNKLDVAKTQWYHFSAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGSPKPGSLPPRVSAAVNGVAFCGTLSGQLFFGWLGDKLGWKKVYGLTLLLMIMCSLASGLSLGHSSQSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKRTRGAFIAAVFAMQGFGILTGGLFAIVMAYVFQAKFNSPAYKVDPIGSTVPQADYLWRIILMAGAIPATLTFYWRLNMPETARYTALVAKNAEQAANDMSKVLQVAIEAEPQKVEVMNSSVANSFGLFSKEFVKRHGLHLLGTTSTWLLLDIAYYSQNLFQKDIFSAIGWIPSPESMNAITELYKIARAQTLIALCSTVPGYWFTVALIDKIGRFKIQLMGFFFMTVFMFALAIPYSYWTNDKSHLIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQNQDKAKADAGFPAGIGVRNSLIVLGVVNLFGMALTFLVPESNGKSLEEMSGENVEVER 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3385898 3387634 + Conep17aG0063100.1 Cone17ag0613 456090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0613 524 Gene3D MFS general substrate transporter like domains 20 524 IPR036259 -
Cone17ag0613 524 SUPERFAMILY MFS general substrate transporter 12 516 IPR036259 -
Cone17ag0613 524 CDD MFS_PhT 25 507 - -
Cone17ag0613 524 FunFam Inorganic phosphate transporter 1-6 20 524 - -
Cone17ag0613 524 Pfam Sugar (and other) transporter 26 516 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone17ag0613 524 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 514 - -
Cone17ag0613 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 509 IPR020846 GO:0022857(InterPro)
Cone17ag0613 524 NCBIfam phosphate:H+ symporter 10 518 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0613 Cone-Chr17:3385898 Cone4ag1129 Cone-Chr4:9741679 3.83e-317 dispersed
Cone17ag0612 Cone-Chr17:3378888 Cone17ag0613 Cone-Chr17:3385898 3.80E-308 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0613 K08176 - rcu:8289772 872.463