Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag0682 | ATGAAAATGGGGGAAAGGCCTAGTATGTTTATTCAAAGACCGAGCACGAAGCAGCTGAGTATTGCTAGTAGTAGTCACAACATGGGGATGATATCCGGACCGCTTTCCTCATCTATATTACAATCTAATGGCGGAGGAGTCCCCGGTCCCACATTTTCGCCGAATCTTCTTCAATACTCTTCTTCTCTTTCATCATCAGCAACCGATGGCACACCAGCATTGCTGCCCGGTTTTCTTGATCTGTCCATAGAGAGGAACGATTGGGAGGAATGGGCTGATCAGTTGATGAGTGATGATTCTTTGAGTTCTTGTAATTGGAATGAGCTTTTAGTTGATACGCAAGTAGCCGATCTGGATCCACAGATGGCATGCCAGGTCTCTACACCATCACCAAATTTTCATCATCAGCAGCAGCAGCATCAGCAACTTCCAGAATTTTCTGGCAATATCCATGCTGTGGGCCCCACCGTTTCCCCGGCTAGTAATATTGCCTTGGCTAATAAGCAGAGAATGCGTTGGACGCCGGAGCTTCATGAAGCGTTCGTGGAGGCTGTAAATCAACTTGGTGGAAGTGAAAGAGCTACCCCTAAGGGTGTTCTAAAGCTATTGAAAGTAGAAGGCTTGACAATCTATCATGTTAAAAGCCATTTGCAGAAATATAGGACTGCTAGATACAGGCCAACATCAGAAGAAGGATCCTCAGGGGATAAGGTGGCATCCCTTGAAGAAACTTCTCTTCACTTGAAACCGGGTATGGATATCACTGAGGCCCTCAGATTGCAGATGGAACTTCAGAAAAGACTCCATGAACAGCTCGAGATCCAAAGAACTCTACAGCTGAGTATAGAAGAACAAGGGAGGTGCCTCCAAATGATGATCGAGAAGCAATGCATTAATAATGACAGGGCGAACAGATCTTCGCCGGATAAGAATTTTCCTTCAGATTCCTATGCAATCGACAATGATTCCTTTCAAGGCCACACGCCTGAAAGAAACAGTATAGAGGCACTTGTAGAAGGAAAACTAAAAGAAGGTCCAGATAATTTTGAGCCTGATGTCTGTGAATCTAATTCCCAGGCAAAAAAGCGCCCCAGAACGGATGAGTAG | 1107 | 45.17 | MKMGERPSMFIQRPSTKQLSIASSSHNMGMISGPLSSSILQSNGGGVPGPTFSPNLLQYSSSLSSSATDGTPALLPGFLDLSIERNDWEEWADQLMSDDSLSSCNWNELLVDTQVADLDPQMACQVSTPSPNFHHQQQQHQQLPEFSGNIHAVGPTVSPASNIALANKQRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLLKVEGLTIYHVKSHLQKYRTARYRPTSEEGSSGDKVASLEETSLHLKPGMDITEALRLQMELQKRLHEQLEIQRTLQLSIEEQGRCLQMMIEKQCINNDRANRSSPDKNFPSDSYAIDNDSFQGHTPERNSIEALVEGKLKEGPDNFEPDVCESNSQAKKRPRTDE | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 4363368 | 4366157 | + | Conep17aG0070000.1 | Cone17ag0682 | 456159 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag0682 | 368 | Coils | Coil | 255 | 275 | - | - | |
Cone17ag0682 | 368 | FunFam | Myb family transcription factor | 167 | 225 | - | - | |
Cone17ag0682 | 368 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 86 | 335 | IPR046955 | GO:0003700(InterPro) | |
Cone17ag0682 | 368 | MobiDBLite | consensus disorder prediction | 334 | 368 | - | - | |
Cone17ag0682 | 368 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 165 | 225 | IPR017930 | - | |
Cone17ag0682 | 368 | MobiDBLite | consensus disorder prediction | 301 | 330 | - | - | |
Cone17ag0682 | 368 | MobiDBLite | consensus disorder prediction | 301 | 368 | - | - | |
Cone17ag0682 | 368 | MobiDBLite | consensus disorder prediction | 222 | 241 | - | - | |
Cone17ag0682 | 368 | Pfam | MYB-CC type transfactor, LHEQLE motif | 252 | 297 | IPR025756 | - | |
Cone17ag0682 | 368 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 168 | 222 | IPR006447 | GO:0003677(InterPro) | |
Cone17ag0682 | 368 | SUPERFAMILY | Homeodomain-like | 167 | 222 | IPR009057 | - | |
Cone17ag0682 | 368 | Pfam | Myb-like DNA-binding domain | 170 | 221 | IPR001005 | - | |
Cone17ag0682 | 368 | Gene3D | - | 167 | 226 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0682 | Cone-Chr17:4363368 | Cone5ag0561 | Cone-Chr5:2394518 | 4.42E-54 | dispersed | |
Cone17ag0682 | Cone-Chr17:4363368 | Cone10ag0633 | Cone-Chr10:3037495 | 1.29E-54 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45048 | PF00076 | RRM_1 | 2.80E-17 | CL0221 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag0682 | - | - | - | 0.0 |