Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0699 ATGACCATTGGCATGGCCCAAAGTGTAAGGATGAATAAGTCTTCCTTTAGCCCTGGCAATGGAAACGTGGATACTATTCTTTATAGCTCAGCTGCTGTTTCAAATGGCGATGGATACGACAGTGACAGCTCCAACTTTGCCCCTCCCACCCCAACGTCCTTATCAATGACAATTCCAGCAGAACTTGCTGGTGCCATACCTCTGATTGATAGATTCCAGGTTGACGGGTTCTTAAGGTTGATGCATAAACAAATCCATTCTGCTGGAAAACGTGGGTTTTTCTCAAAAAAAGCTGTAGGAACTCCAGTTCGCGAAAGATATACGTTTGAGGACATGCTGTGCTTTCAAAAGGATCCTATACCAACTTCATTGCTTAAAATAAATAGTGACCTGGTCAGCCGTGCTACAAAGCTATTCCAGATAATTTTGAAGTACATGGGAGTTGATTCTTCTGATAGGGCTAATCCAGACAACTTGGATGAACGAATTGAGCTTGTTGGAAAACTATTTAAGCAAACTTTGAAGTGTTTAGAGCTCCGAGATGAACTGTTTGTTCAGATATCAAAGCAGACAAGAAATAGTCCCGACAGGCAATACTTGATTAAATCATGGGAGCTGATGTATTTATGTGCATCCTCCATGCCTCCAAGCAAGGACATTGGTGGGTATCTATCGGAGTATGTTCATAATGTAGCCCATGGTTTGAGTACTGATTCTGATGTTCGAGTGCTTGCATTAAGTACATTAAATGCTTTAAAGCGCTCTGTAAAAGCTGGTCCAAGGCATACAATACCAGGGCGTGAGGAAGTTGAGGCTCTTCTAATGGGTCAAAGGCTTACAACTATAGTGTTTTTCTTGGATGAAACTTTTGAAGAAATAACTTATGACATGGCAACAACAGTAGCTGATGCTGTTGAGGAACTGGCAAGGATAATAAAGCTATCAGCGTACTCTAGCTTCAGTCTGTTTGAATGTCGTAAAGTTGTCTCTGGTGCTAAATCAAATGATTCTGGAAATGAGGAGTATATAGGGCTGGATGATAACAAATATATAGGAGATCTGTTGGCAGAATTCAAGGCAGCAAAGGATAGAAGTAAAGGAGAAATTTTGCATTGCAAACTAACATTTAAAAAGAAGCTGTTTCGGGAGTCGGATGAAGCTGTAACAGACCCAATGTTTGGGCAATTGTCCTATGTTCAATTACAACATGATTATATATTGGGCAATTATCCTGTTGGGAGGGATGACGCTGCACAGCTATCTGCATTGCAAATCTTAGTTGATATTGGGTTTACTAATACCCCCGAGTCATGCACTGAATGGAATTCACTTTTGGAAAGATTCCTACCGAGACAAATTGCAATAACACGAGCAAAGCGAGAATGGGAGTTGGATATTCTTTCCCGTTACCGTGCAATGGAGAATTTGACAAAAGATGATGCAAGACAACAATTTCTGCGGATATTAAGAACACTTCCTTATGGGAATTCAGTTTTTTTCAGTGTTCGCAAAATTGATGATCCCATTGGACTTCTTCCGGGTCGAATAGTTCTGGGCATCAACAAAAGAGGGGTTCATTTTTTTCGCCCAGTTCCAAAGGAATATTTACATTCTGCAGAGCTAAGAGACATAATGCAATTTGGCAGTAGTAATACTGCAGTGTTCTTTAAAATGAGGGTTGCTGGTGTCCTTCACATATTCCAGTTTGAAACTAAGCAGGGAGAAGAAATTTGTGTTGCTCTCCAGACTCATATAAATGATGTTATGTTGCGTCGGTACTCTAAAGCCAGATCTTCTGCCAGTGGCTCAGTAAATGGAGATCATTCCAATAATCTGAAGCAGTCCAACACAGAAATATATGAGAAACGTGTTCGGGATTTAACAAAAGTCATTGAAGATTCTCAAAGGAATGCTGATCAGCTCTTGGAAGAATTGCATGAAAAGCAAAAGCAAGAAGTGATAATGCAAGAAGAATTGGAAGGCTTGAATGAATCCTTGAAATGTGAGAAGCAGAGCTTGGGAGAATTGAAGCATGATCTTAATCGGCTTAGGACATTGTGCGATGAAAAAGATAAGGCACTTCAGGATGCATTGGTGGAGAAAAAAGGAATGGAAGTCAGATTGGCCAAGATGAGTAATCTAGTGTTGGAAAACAATATGAATAAGGATTTGGTTGGAACAAATAATCAGGTATTAAAAAAGCTTCAGGATGAATTAAAACTTCGTAGTGATGAGTTACATGCAGCTGAAGACACTATACAAAGATTGGCAAATGAAAAGCTGACATTGGAACAAAGTATTTTTGGACTGGAAAAGAAAAAAGTTGAGGAGATGGACTACCTTCAGAGGAACTTTGAGCTAGAACGCAAAGTCTTAAAGCTTAGGGTGTCAGAACTTGAGAAGAAACTTGAAGGGGTTATTCAAGAGATAGCTGTTTCTGAGTCGACTCTTGCAAACAGGAACTCTGATTTGGCTGCATTACAAAATAGCCTCAAGGAATTAGAAGACCTGAGAGAAATGAAAGAGGATATTGATAGAAAGAATGAGCAAACTGCTGCCATTCTGAAGATGCAAGGGGCTCAACTAGCTGAGTTGGAAGTGCTTTATAAGGAAGAACAAGTTTTAAGGAAACGATATTTCAACACTATAGAAGACATGAAAGGAAAGATTAGAGTTTATTGTCGGCTTAGACCTCTAAATGAAAAGGAGCTTATTGAAAAGGAAGGAAATATGCTTTCAAGTCTAGATGAGTTCACAGTTGAACATCCATGGAAAGATGATAAATCTAAGCAACATATATATGATCGTGTATTTGATGGCACTGCCTCACAGGAAGATGTTTTTGAGGATACCCAGTATTTAGTGCAGTCAGCTGTTGATGGATATAATGTTTGCATCTTTGCTTATGGTCAAACTGGTTCTGGAAAGACATTTACTATTTATGGATCTCAGGACAATCCTGGTCTTACACCACGGGCTACTACTGAACTTTTCAAAATTTTAAAGAGAGATAGTAACAAATTCTCATTCTCATTGAAGGCCTACATGGTGGAGCTGTATCAAGACACGCTTGTTGATCTTCTATTACCTAAGAATGGAAAACGCTTAAAATTGGATATAAAAAAGGATGCAAAGGGAATGGTATCAGTAGAAAATGTAACAGTGGCATCCATCTCAACTTTGGAGGAGTTAAAACTCATTATTCGTAGAGGATCTGAGCAAAGACATACATCTGGAACTCAAATGAATGAACAAAGTTCAAGATCTCATTTGACCCTTTCAGTAATAATTGAGAGCACTAACCTTCAAACTCAGTCTGTTGCAAGGGGAAAGTTGAGTTTTGTGGACCTTGCTGGCTCAGAAAGAGTAAAAAAGTCGGGTTCTGCGGGTAGTCAACTTAAGGAAGCACAAAGCATAAACAAGTCACTTTCAGCACTTGGGGATGTTATCAGCGCATTGTCATCAGGCAGCCAACATATTCCTTACAGGAATCACAAGCTAACAATGCTAATGAGTGATTCCCTTGGTGGTAATGCAAAAACGCTTATGTTTGTTAATGTATCTCCTGCAGAATCCAATTTGGATGAAACATATAATTCACTCACGTATGCATCAAGGGTTCGATCAATCGTTAATGATCCGAGCAAAAATGTCTCATCAAAGGAAGTAGCGCGTCTGAAAAAGTTGGTTGCCTATTGGAAGGAGCAGGCAGGTAAGAGGGGGTATGATGATGATTTGGAGGAAATTCAAGAAGAGCGACCCACAAGAGACAAGCCTGATGGCCGCCATTCCATGTAG 3798 39.71 MTIGMAQSVRMNKSSFSPGNGNVDTILYSSAAVSNGDGYDSDSSNFAPPTPTSLSMTIPAELAGAIPLIDRFQVDGFLRLMHKQIHSAGKRGFFSKKAVGTPVRERYTFEDMLCFQKDPIPTSLLKINSDLVSRATKLFQIILKYMGVDSSDRANPDNLDERIELVGKLFKQTLKCLELRDELFVQISKQTRNSPDRQYLIKSWELMYLCASSMPPSKDIGGYLSEYVHNVAHGLSTDSDVRVLALSTLNALKRSVKAGPRHTIPGREEVEALLMGQRLTTIVFFLDETFEEITYDMATTVADAVEELARIIKLSAYSSFSLFECRKVVSGAKSNDSGNEEYIGLDDNKYIGDLLAEFKAAKDRSKGEILHCKLTFKKKLFRESDEAVTDPMFGQLSYVQLQHDYILGNYPVGRDDAAQLSALQILVDIGFTNTPESCTEWNSLLERFLPRQIAITRAKREWELDILSRYRAMENLTKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGLLPGRIVLGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSSASGSVNGDHSNNLKQSNTEIYEKRVRDLTKVIEDSQRNADQLLEELHEKQKQEVIMQEELEGLNESLKCEKQSLGELKHDLNRLRTLCDEKDKALQDALVEKKGMEVRLAKMSNLVLENNMNKDLVGTNNQVLKKLQDELKLRSDELHAAEDTIQRLANEKLTLEQSIFGLEKKKVEEMDYLQRNFELERKVLKLRVSELEKKLEGVIQEIAVSESTLANRNSDLAALQNSLKELEDLREMKEDIDRKNEQTAAILKMQGAQLAELEVLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLNEKELIEKEGNMLSSLDEFTVEHPWKDDKSKQHIYDRVFDGTASQEDVFEDTQYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSQDNPGLTPRATTELFKILKRDSNKFSFSLKAYMVELYQDTLVDLLLPKNGKRLKLDIKKDAKGMVSVENVTVASISTLEELKLIIRRGSEQRHTSGTQMNEQSSRSHLTLSVIIESTNLQTQSVARGKLSFVDLAGSERVKKSGSAGSQLKEAQSINKSLSALGDVISALSSGSQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLTYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKEQAGKRGYDDDLEEIQEERPTRDKPDGRHSM 1265
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 4722342 4740139 + Conep17aG0071700.1 Cone17ag0699 456176
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0699 1265 Pfam RA like domain 278 379 - -
Cone17ag0699 1265 SUPERFAMILY Second domain of FERM 377 494 IPR035963 -
Cone17ag0699 1265 Pfam FERM central domain 384 500 IPR019748 -
Cone17ag0699 1265 Pfam PTB domain (IRS-1 type) 510 586 IPR002404 -
Cone17ag0699 1265 FunFam Kinesin-like calmodulin-binding protein 833 1212 - -
Cone17ag0699 1265 PRINTS Kinesin heavy chain signature 961 982 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag0699 1265 PRINTS Kinesin heavy chain signature 1160 1181 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag0699 1265 PRINTS Kinesin heavy chain signature 1080 1097 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag0699 1265 PRINTS Kinesin heavy chain signature 1111 1129 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag0699 1265 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856(InterPro)
Cone17ag0699 1265 Gene3D - 391 492 IPR014352 -
Cone17ag0699 1265 CDD FERM_B-lobe 395 492 IPR019748 -
Cone17ag0699 1265 SUPERFAMILY PH domain-like 499 587 - -
Cone17ag0699 1265 SMART kinesin_4 887 1218 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag0699 1265 Gene3D Kinesin motor domain 876 1212 IPR036961 -
Cone17ag0699 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 889 1237 IPR027417 -
Cone17ag0699 1265 Gene3D - 1213 1261 - -
Cone17ag0699 1265 Gene3D MyTH4 domain 94 276 IPR038185 -
Cone17ag0699 1265 SMART B41_5 275 499 IPR019749 -
Cone17ag0699 1265 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856(InterPro)
Cone17ag0699 1265 PANTHER KINESIN-LIKE PROTEIN KLP-3 729 1242 IPR027640 GO:0003777(InterPro)|GO:0007018(InterPro)
Cone17ag0699 1265 ProSiteProfiles MyTH4 domain profile. 115 274 IPR000857 GO:0005856(InterPro)
Cone17ag0699 1265 CDD KISc_C_terminal 887 1212 - -
Cone17ag0699 1265 FunFam Kinesin-like calmodulin binding protein 382 493 - -
Cone17ag0699 1265 Coils Coil 732 773 - -
Cone17ag0699 1265 Coils Coil 782 854 - -
Cone17ag0699 1265 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 278 381 - -
Cone17ag0699 1265 ProSitePatterns Kinesin motor domain signature. 1110 1121 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Cone17ag0699 1265 MobiDBLite consensus disorder prediction 1242 1265 - -
Cone17ag0699 1265 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 94 276 - -
Cone17ag0699 1265 ProSiteProfiles Kinesin motor domain profile. 889 1210 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag0699 1265 SMART MyTH4_1 115 274 IPR000857 GO:0005856(InterPro)
Cone17ag0699 1265 SUPERFAMILY Prismane protein-like 831 893 IPR011254 GO:0003824(InterPro)|GO:0016491(InterPro)
Cone17ag0699 1265 Pfam Kinesin motor domain 895 1210 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag0699 1265 CDD FERM_C_KCBP 496 602 - -
Cone17ag0699 1265 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 497 606 - -
Cone17ag0699 1265 Coils Coil 624 665 - -
Cone17ag0699 1265 Gene3D - 278 382 - -
Cone17ag0699 1265 Gene3D - 497 605 IPR011993 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0699 Cone-Chr17:4722342 Cone1ag0108 Cone-Chr1:593308 8.47E-70 dispersed
Cone17ag0699 Cone-Chr17:4722342 Cone8ag0202 Cone-Chr8:1062345 6.89E-72 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0699 K27887 - rcu:8258765 2050.4