Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0750 ATGGAGACGTCGGAGTCCGATGCCTACGAGCTCCTGTTCGGCTCCATGGCTCTCATTCCCGTTTCGCACTATCTGTTCGCCTTCCTTCTTGTCTCTCTCATTTTTCTCTACCGTTTCCTGGAATTCCATTTCCTCCAAGATGTTTTCTCTGGATTTAGAGGCAGTCCTGTCGGCTTGACGTATAACGCCTCCTCGTCTCTATACGACGTCGTCGTTTCCAGGTGTCGGATCCTTCGCGGCAGGTATTTAGCCACTCCCTGGCTCTCGAGCCCTCATTTTCAGACTTGCTTTCTGAATTTTTTTGGAAGGCCTCCTGTTTTTAGCTACAGAAGACAACTGTTCCAAGTCCCTGATGGGGGAACCATTGCATTGGATTGGCTAATGAATTCTGATGGTAATGATAAAGTTTATGGAGGTGCTTTTAACGCAAACCACTCTATTTCTAAAGATGACACCACCCCTATAGTGGTAGTGATACCTGGTTTAACAAGCGATTCCTCCTCTGCTTACATAAAGCATTTGGCATTTAGCACTGCAAAACATGGATGGAATGTGGTTGTAAGCAACCATAGAGGATTGGGTGGCGTTTCCATTACTTCTGATTGCTTTTATAATGCTGGATGGACTGAGGATACACGGGTAATTATTAGATATCTCCATCATGAATATCCCAAGGCTCCACTATTTGCTGTGGGAACAAGCATTGGTGCCAACATCCTGGTAAAATATCTTGGCGAAGATGGGGAGACTGTTCCTGTTGCTGGGGCTGTGGCTATTTGCTCGCCATGGGACCTTTTGATTGGTGACAGGTTTATAAGCCGCAGGATTGTGCAGAAGTTTTATGACAGGGCTCTTACAATTGGCCTTCAAGGTTATGCGCAATTACATGAACCTCGATATTCTCGCCTTGCTAATTGGGAAGGGATTAAGAAGTCGCGTTCTATTCGAGATTTTGACAACCATGCAACTTGTCATGTTGGGAAATTTGAGACAGTGGATACTTACTACAGGCGCTGTAGTAGTGCTGCTTATGTGGGAAATGTGAGAGTGCCACTACTTTGTATCAGTGCCTTGGATGATCCCGTCTGTACAAGGGAAGCCATTCCTTGGGATGAATGCAAGGCAAATAAAAACGTTGTGTTGGCCACCCCAAAACATGGAGGGCACTTGGCATTCTTTGAAGGAATAACTGCAAGTAGCCTGTGGTGGGTAAGAGCTGTTGGTGAATATCTTGGTGTTCTACACTCTAGCCCCTGTATGCATGTGCAAAAGAAGGTTCTGAACTGTGGACCCCATTCTTCATTGGACTCTTCAATCGACCAGGGCCCATATGTAGATGTTGTGAGGGATAGAATGGTAGCGGCGATAAGCAGTGAGCAAGTTATACATGATGAAACAGATTTGGATAATGCTGAGAAATCTGAGCACTTAATGAAAACAAAGACTTCTACTGAGCCAATAAGTGAACAAGTGTCTGTTGAAGGTGTTGATTTGAGAAGTAGTGTAAGGAGAATGTTACAAGCTTTGCCTCGACATGGACGAGAGAAATGGTCTATATGGTTGCTTGCTTACATTGCCTTCATAACTAGCTGGCCAGTGTTGGGCTCTATACTTGGCTTGTTCTTTGGTAAGAAACGTAGAAAGGCCTTACCTCCTGTTTTCCTCTCAGATTGA 1674 44.92 METSESDAYELLFGSMALIPVSHYLFAFLLVSLIFLYRFLEFHFLQDVFSGFRGSPVGLTYNASSSLYDVVVSRCRILRGRYLATPWLSSPHFQTCFLNFFGRPPVFSYRRQLFQVPDGGTIALDWLMNSDGNDKVYGGAFNANHSISKDDTTPIVVVIPGLTSDSSSAYIKHLAFSTAKHGWNVVVSNHRGLGGVSITSDCFYNAGWTEDTRVIIRYLHHEYPKAPLFAVGTSIGANILVKYLGEDGETVPVAGAVAICSPWDLLIGDRFISRRIVQKFYDRALTIGLQGYAQLHEPRYSRLANWEGIKKSRSIRDFDNHATCHVGKFETVDTYYRRCSSAAYVGNVRVPLLCISALDDPVCTREAIPWDECKANKNVVLATPKHGGHLAFFEGITASSLWWVRAVGEYLGVLHSSPCMHVQKKVLNCGPHSSLDSSIDQGPYVDVVRDRMVAAISSEQVIHDETDLDNAEKSEHLMKTKTSTEPISEQVSVEGVDLRSSVRRMLQALPRHGREKWSIWLLAYIAFITSWPVLGSILGLFFGKKRRKALPPVFLSD 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5587275 5601565 - Conep17aG0076800.1 Cone17ag0750 456227

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0750 557 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 10 444 IPR050960 GO:0034338(PANTHER)|GO:0044255(PANTHER)|GO:0047372(PANTHER)
Cone17ag0750 557 Pfam alpha/beta hydrolase fold 154 395 IPR000073 -
Cone17ag0750 557 FunFam Embryogenesis-associated protein EMB8 140 411 - -
Cone17ag0750 557 SUPERFAMILY alpha/beta-Hydrolases 108 398 IPR029058 -
Cone17ag0750 557 Gene3D alpha/beta hydrolase 131 398 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0750 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0591 Cone-Chr12:5138724 Cone17ag0750 Cone-Chr17:5587275 4.73E-53 dispersed
Cone15ag0883 Cone-Chr15:6798870 Cone17ag0750 Cone-Chr17:5587275 7.67E-291 dispersed
Cone17ag0750 Cone-Chr17:5587275 Cone19ag0380 Cone-Chr19:3253858 1.62E-63 dispersed
Cone17ag0750 Cone-Chr17:5587275 Cone13ag0395 Cone-Chr13:3594894 2.76E-240 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1265 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone17ag0750 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005401 2 0 1 1 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 2 1 1 1 1 1 1 1 2 40