Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0785 ATGGCTTTGTTTTCCAAAGCTGCAATATCTCGTGGAATGAACCCTTTTGTCTTTGTTGTTTATAGACAAGCTCTTGCCTCACTTGCCTTAGCTCCTCTGGCTTTTTTCCTTGAAAGAAAAAAGGCTGCTTGTTTGTCAGTCAACTTACTCTTCAAGATTTTCTCTGTTTCTCTTTGTGGGCTCACCCTGAGTTTAAACCTGTACTATATTGCAATGAACTACACCTCTGCAACATTTGCTGCTGCCAGCACTAACACAATTCCTGTCATTACCTTCATTATAGCCGCTCTCTTAAGGATGGAAAGAATTTCCGTTAAACATTGGCATGGAGCTGCCAAAGTGTTGGGTTCTATTCTAGGTCTTTCTGGGGCATTGGTCTTTGCATTTGTGAAGGGACCACCGATAAAGTTCATGATTAACTGGTATTTGGATGTAAAAGAAGAGCCTCATCACCCATCAGTTTCAGATTACTCTAAAGGGGAATGGATAAAAGGTTCTATAATCATGCTCGCAGGAAACACTTGCTGGTCCTTATGGCTTATTTTACAGGGTCTGATAGTTAAGCAATATCCGGCCAAATTAAGACTTACTACTCTACAATGCTTCTTTAGCTGCATACAATCAGCCGTTTGGGCAATTGCTATGGAGAGAAATCCGTCAGCTTGGAAACTTGGATGGAATGTTAATTTCCTTTCCGTGGCTTATTGTGGTATAATTGTGACTGGAATTACTTATTGGCTCCAAGTTTGGTCTATAGAGAAGAAAGGACCAGTTTTCACAGCAATGTTCACTCCTTTAGCATTAATCATAACAGCCATCTTGTCAGCATTTATCTGGAAAGAAATCCTCCACTGGGGAAGTTTTATTGGGGCTGTTTTGCTGGTAGTGGGGCTGTACAGCGTTCTGTGGGGGAAGAACAAAGAAGATGGAAAAAGTGAAGTAAACGAAGAAGTTAGCGAAGAAGCCAAAGAGGACGTCGTGTTGGAGTGCATTACGCATCAATGA 1005 41.39 MALFSKAAISRGMNPFVFVVYRQALASLALAPLAFFLERKKAACLSVNLLFKIFSVSLCGLTLSLNLYYIAMNYTSATFAAASTNTIPVITFIIAALLRMERISVKHWHGAAKVLGSILGLSGALVFAFVKGPPIKFMINWYLDVKEEPHHPSVSDYSKGEWIKGSIIMLAGNTCWSLWLILQGLIVKQYPAKLRLTTLQCFFSCIQSAVWAIAMERNPSAWKLGWNVNFLSVAYCGIIVTGITYWLQVWSIEKKGPVFTAMFTPLALIITAILSAFIWKEILHWGSFIGAVLLVVGLYSVLWGKNKEDGKSEVNEEVSEEAKEDVVLECITHQ 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6051298 6053378 - Conep17aG0080300.1 Cone17ag0785 456262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0785 334 PANTHER WAT1-RELATED PROTEIN 1 317 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone17ag0785 334 Pfam EamA-like transporter family 164 302 IPR000620 GO:0016020(InterPro)
Cone17ag0785 334 Pfam EamA-like transporter family 3 122 IPR000620 GO:0016020(InterPro)
Cone17ag0785 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 122 - -
Cone17ag0785 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 200 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0785 Cone-Chr17:6051298 Cone19ag0646 Cone-Chr19:5539031 1.06E-78 dispersed
Cone8ag0055 Cone-Chr8:281506 Cone17ag0785 Cone-Chr17:6051298 8.76E-93 transposed
Cone17ag0785 Cone-Chr17:6051298 Cone20ag0379 Cone-Chr20:1766663 2.22E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0785 - - - 0.0