Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0789 ATGCCCTCCAACACTAGTGACCAGTTCTACCTCGAACACCAACCAACTCTAGAGATCGAAAGCAACAAGATTTTTGATTACTCAAAACGAGCACAGTGGCTTCGAGCAGCTGTTTTAGGTGCTAATGATGGTCTAGTCTCCACTGCATCTCTAATGGTCGGTGTAGGAGCCGTGAAACAAGACATTAAAGTCATGATACTCGCTGGATTTGCCGGTCTAGTGGCTGGAGCTTGTAGCATGGCTATAGGAGAGTACGTGTCTGTTTATTCACAGTTGGATGTTGGGGTAGCTCAGGAAAAGAGAGAGAAGCAAAGAGGGACCGGAGGAGGAGAAGAGATAGAAGAGAAAGAGAAAGAGAATTTGCCAAACCCTCTGCAAGCTGCTTTTGCTTCGGCTTTTGCCTTTTCAGTGGGAGCAATCGTACCGTTGTTAGCAGCTTCTTTTATAAAGGAGTACAGGGTGAGAGTTGGAGTGGTGCTTTCGGCAGTGACTTTGGCTTTGATGATGTTTGGATGGTTGAGTGCTAAGCTTGGAAAGACACCGGTGATTAGGGCTGCAACAAGGGTCTTGGTTGGAGATCATGAGCCAGGGAAAAACAATAGTGAAGATATTGTGACATAA 621 46.05 MPSNTSDQFYLEHQPTLEIESNKIFDYSKRAQWLRAAVLGANDGLVSTASLMVGVGAVKQDIKVMILAGFAGLVAGACSMAIGEYVSVYSQLDVGVAQEKREKQRGTGGGEEIEEKEKENLPNPLQAAFASAFAFSVGAIVPLLAASFIKEYRVRVGVVLSAVTLALMMFGWLSAKLGKTPVIRAATRVLVGDHEPGKNNSEDIVT 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6104243 6105070 - Conep17aG0080700.1 Cone17ag0789 456266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0789 206 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 192 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Cone17ag0789 206 Pfam VIT family 34 105 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cone17ag0789 206 Pfam VIT family 117 191 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0789 Cone-Chr17:6104243 Cone8ag0963 Cone-Chr8:9112981 4.98E-63 dispersed
Cone17ag0789 Cone-Chr17:6104243 Cone20ag0384 Cone-Chr20:1797722 5.59E-107 wgd
Cone17ag0789 Cone-Chr17:6104243 Cone4ag1505 Cone-Chr4:11702118 4.92E-75 wgd
Cone17ag0789 Cone-Chr17:6104243 Cone7ag1445 Cone-Chr7:10230273 8.36E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0789 K22736 - gmx:100807991 248.054