Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag0789 | ATGCCCTCCAACACTAGTGACCAGTTCTACCTCGAACACCAACCAACTCTAGAGATCGAAAGCAACAAGATTTTTGATTACTCAAAACGAGCACAGTGGCTTCGAGCAGCTGTTTTAGGTGCTAATGATGGTCTAGTCTCCACTGCATCTCTAATGGTCGGTGTAGGAGCCGTGAAACAAGACATTAAAGTCATGATACTCGCTGGATTTGCCGGTCTAGTGGCTGGAGCTTGTAGCATGGCTATAGGAGAGTACGTGTCTGTTTATTCACAGTTGGATGTTGGGGTAGCTCAGGAAAAGAGAGAGAAGCAAAGAGGGACCGGAGGAGGAGAAGAGATAGAAGAGAAAGAGAAAGAGAATTTGCCAAACCCTCTGCAAGCTGCTTTTGCTTCGGCTTTTGCCTTTTCAGTGGGAGCAATCGTACCGTTGTTAGCAGCTTCTTTTATAAAGGAGTACAGGGTGAGAGTTGGAGTGGTGCTTTCGGCAGTGACTTTGGCTTTGATGATGTTTGGATGGTTGAGTGCTAAGCTTGGAAAGACACCGGTGATTAGGGCTGCAACAAGGGTCTTGGTTGGAGATCATGAGCCAGGGAAAAACAATAGTGAAGATATTGTGACATAA | 621 | 46.05 | MPSNTSDQFYLEHQPTLEIESNKIFDYSKRAQWLRAAVLGANDGLVSTASLMVGVGAVKQDIKVMILAGFAGLVAGACSMAIGEYVSVYSQLDVGVAQEKREKQRGTGGGEEIEEKEKENLPNPLQAAFASAFAFSVGAIVPLLAASFIKEYRVRVGVVLSAVTLALMMFGWLSAKLGKTPVIRAATRVLVGDHEPGKNNSEDIVT | 206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 6104243 | 6105070 | - | Conep17aG0080700.1 | Cone17ag0789 | 456266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag0789 | 206 | PANTHER | FE(2+)/MN(2+) TRANSPORTER PCL1 | 17 | 192 | IPR008217 | GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro) | |
Cone17ag0789 | 206 | Pfam | VIT family | 34 | 105 | IPR008217 | GO:0005384(InterPro)|GO:0030026(InterPro) | |
Cone17ag0789 | 206 | Pfam | VIT family | 117 | 191 | IPR008217 | GO:0005384(InterPro)|GO:0030026(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0789 | Cone-Chr17:6104243 | Cone8ag0963 | Cone-Chr8:9112981 | 4.98E-63 | dispersed | |
Cone17ag0789 | Cone-Chr17:6104243 | Cone20ag0384 | Cone-Chr20:1797722 | 5.59E-107 | wgd | |
Cone17ag0789 | Cone-Chr17:6104243 | Cone4ag1505 | Cone-Chr4:11702118 | 4.92E-75 | wgd | |
Cone17ag0789 | Cone-Chr17:6104243 | Cone7ag1445 | Cone-Chr7:10230273 | 8.36E-81 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag0789 | K22736 | - | gmx:100807991 | 248.054 |