Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0791 ATGGATTTGATTGAAGGTGTCGGAGAAAGCTCGTCGCCGCCTAGAAGCTTTGGAGGAGGATTCTCTAACCTTGATATTAGAAACGATGTGTATAACAGATTGGTGGAGTGTCGAAATGAGGAGGCAGTGAGTAATCCTGATTTTCGTGAACAGTTGGATGCTCACTTCAATCGCTTGCCTCCAAGTTACGGACTAGATGTTAACATGGAAAGAGTGGAAGATGTCTTGTTACATCAGAAGCTTCTTGCATTAGCAAAGGATCCAGAAAAACGGCCTGTTTACATTATTCGTTTCCTGGAGCATTTAAATACTCGGTCAGAGGTTAACAATGATCAAGAATTTACAAGTATTATTTCTCCTGAAAGGCTACCTTGTGTATCAGTTGATGAAAGAGTTCTAAGATCATCCAAGAGAACCGGGGATTGCACGGTTGACTTTGAGCCCTGCTCCAAGCTTGAGGACTTGAATTTGGATGTTAGGAAGAATACAGAGGATATAGCTGAAAGATGTGTTATGGATAGTATTTACGGAAGGAAAGACAATTCACTCACGCCGATTCATGAAGTAATATTTTCTACTGTTGACAAGCCAAAGACTCTTAGCCAGCTTTCTGCTTTGCTTTCGGATATAGGACTTAACATTCGTGAAGCACACGTATTCTCAACCACTGATGGCTACTCCTTGGATGTATTTGTGGTTGATGGATGGCCTTATGAGGATACAGATGGTTTATATGAAGCAATGAAAAAAGCTATCGTTAGATGTGAGGGGTCATGGTCAGGTTCTCATTCAACAGTGGAGAAAGCATTAGCTGTGCAATCAAAATGTGAAGATTGGGAAATAGACAGAAGGTTATTGAAGATGGGAGAGAGACTTGCTTCTGGATCTTGTGGAGATTTGTATCATGGAGTCTATCTTGGTCAAGATGTAGCGGTTAAGATACTTCGATCTGAACATCTGAACGATACTTTAGAGGATGAATTCACTCAAGAAGTAGCAATTCTCAGGGAGGTCCGACATAGAAATGTTGTTCGCTTCATTGGCGCATGTACAAGATTTCCACAATTGTGCATTGTAACAGAGTATATGCCAGGGGGAAGTCTTTATGATTACTTGCATAAGAACCATAATGCCTTGAAGCTCCCTCAGCTACTGAAATTTGCTATAGATGTCTGCCAAGGGATGGAATATCTTCATCTCAAGAAAATCATTCACAGGGATCTAAAGACAGCTAATTTGCTAATGGACACTCAAAATGTTGTTAAAGTAGCAGATTTTGGGGTTGCACGATTCCAGAACCGGGGGGGAGTAATGACTGCAGAAACTGGAACATACAGATGGATGGCACCTGAGGTGATAAACCATCAGGCCTATGATCAAAAAGCAGATGTGTTCAGTTTTGCTATTGTACTGTGGGAACTGGTTACAGCAAAGGTTCCTTATGAAACCATGACTCCACTACAAGCTGCTCTTGGTGTGAGACAGGGACTTCGTCCAGAGCTCCCCATGAAAGCACATCCTAAACTGTTGGAACTAATGCAGAAATGTTGGGATGCTGTGCCTGAAAACCGGCCTTCCTTCTCTGATATAAAACTTGAACTCGAAAATATCTTACAGGAAACCAATGGTGTGGCTAATGGCACCTGA 1647 41.83 MDLIEGVGESSSPPRSFGGGFSNLDIRNDVYNRLVECRNEEAVSNPDFREQLDAHFNRLPPSYGLDVNMERVEDVLLHQKLLALAKDPEKRPVYIIRFLEHLNTRSEVNNDQEFTSIISPERLPCVSVDERVLRSSKRTGDCTVDFEPCSKLEDLNLDVRKNTEDIAERCVMDSIYGRKDNSLTPIHEVIFSTVDKPKTLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPYEDTDGLYEAMKKAIVRCEGSWSGSHSTVEKALAVQSKCEDWEIDRRLLKMGERLASGSCGDLYHGVYLGQDVAVKILRSEHLNDTLEDEFTQEVAILREVRHRNVVRFIGACTRFPQLCIVTEYMPGGSLYDYLHKNHNALKLPQLLKFAIDVCQGMEYLHLKKIIHRDLKTANLLMDTQNVVKVADFGVARFQNRGGVMTAETGTYRWMAPEVINHQAYDQKADVFSFAIVLWELVTAKVPYETMTPLQAALGVRQGLRPELPMKAHPKLLELMQKCWDAVPENRPSFSDIKLELENILQETNGVANGT 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6136205 6156763 + Conep17aG0080900.1 Cone17ag0791 456268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0791 548 ProSiteProfiles Protein kinase domain profile. 286 538 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag0791 548 Gene3D Transferase(Phosphotransferase) domain 1 364 546 - -
Cone17ag0791 548 ProSiteProfiles ACT domain profile. 188 262 IPR002912 -
Cone17ag0791 548 SMART serkin_6 286 538 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag0791 548 SUPERFAMILY ACT-like 186 252 IPR045865 -
Cone17ag0791 548 CDD STKc_MAP3K-like 292 530 - -
Cone17ag0791 548 SUPERFAMILY Protein kinase-like (PK-like) 272 538 IPR011009 -
Cone17ag0791 548 FunFam Serine/threonine-protein kinase isoform 1 276 364 - -
Cone17ag0791 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0791 548 Pfam Protein tyrosine and serine/threonine kinase 286 533 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0791 548 MobiDBLite consensus disorder prediction 1 20 - -
Cone17ag0791 548 Gene3D Phosphorylase Kinase; domain 1 273 363 - -
Cone17ag0791 548 PANTHER SERINE-THREONINE PROTEIN KINASE 242 537 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone17ag0791 548 PRINTS Tyrosine kinase catalytic domain signature 443 453 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0791 548 PRINTS Tyrosine kinase catalytic domain signature 462 484 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0791 548 PRINTS Tyrosine kinase catalytic domain signature 505 527 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0791 548 PRINTS Tyrosine kinase catalytic domain signature 360 373 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0791 548 PRINTS Tyrosine kinase catalytic domain signature 397 415 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0844 Cone-Chr12:7624899 Cone17ag0791 Cone-Chr17:6136205 3.51E-164 dispersed
Cone12ag1251 Cone-Chr12:9642935 Cone17ag0791 Cone-Chr17:6136205 5.76E-169 dispersed
Cone17ag0791 Cone-Chr17:6136205 Cone8ag0877 Cone-Chr8:8624044 8.53E-168 dispersed
Cone17ag0791 Cone-Chr17:6136205 Cone20ag0386 Cone-Chr20:1812146 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82265 PF00063 Myosin_head 3.60E-252 CL0023 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0791 - - - 0.0