Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0802 ATGGTAAGTTCGGGGACACACACTCCAATGGGTGGGCCCCAGTCTGTTTCGCCTTCACTTTTGCGGTCAAATTCTGGAATGCTGGGGGCTCAAGGGGGTCCACCTCAGACGAATTTCCCATCTCTTGTGTCACCTCGTACACCATTTACTAACATGAATATGCTTGGTAACATGGTAAACGTATCATCTCTACTTAACCAGTCTTTTGGAAATGGAGGTCCAAGTTCCGGGCTTTCAGGCTCTGGGGGAAGCCAGCGTGGTGGAGGGGTCAACCCAAATTCTGAGGCGGACCCACTTTCTGGGGTTGGCAATGGAATGAGCTTCAATAACCCGTCATCATCATTTGTAGCATCTAACATGGCAAATCCTGGTTCGTCCGGTCAAGGTCAGGGCTCGCAATTTTCAAATCTCGCAAATAGTCAACTACTATCAGATCATCAGCATTCCCATCAACTTGAGCCTCAGAACTTCCAGCAAAACCAACAGCCAATACACCAGTTCTCTGGTTCTCAGTCCACCCAACAGCAGCAGCAACAACAACAATTTCAAGTCATCCGAGGGGGAGGAGGCTTAGGTGGTGTGGGACCGGTAAAATTGGAGCCTCAGTTGACTAGCAATGATCATCAACAAGGACAGCTCACCCAACAGGCATTGAGGAACCTCGGTCCAGTGAAATTGGAATCCCAGAGACTACAGCCTAGTAGAACGTTAGTTCCTGTGAAAATGGAACCACAGCAATCTGATCAATCTGTTTTCTTGCATCAACAGCAGCAGCAACAGCAACAACAACAGCAACAACAACATTTTTTTCATATGTCGAGACAACCCTCTCAGGCTGCTGCTGCTCAGATAAATCTTTTGCATCAACAAAGGTTATTACAGCTACAACATCAGCAACAGCAACAACAGCAACAACAGCAGCAGCTCTTGAAGTCAATGCCTCAACAGAGGCCACAATTACAACAGCAGAATGTTCCTCTGAGATCTCTTGGAAAGCCATTGTATGAACCTGGAATGTGTGCTCGGCGTCTGACTCATTACATGTGTCAGCAACAAAACCGACCTGAAAACAACAATATTGAATTCTGGAGGAAGTTTGTTACTGAGTACTATGCTCCCCATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAATGGTCGGCATACAACTGGAGTTTTCCCTCAGGATGTCTGGCATTGTGAGATATGCAACCGTAAGCCTGGACGTGGTTTTGAAGCGACCTTGGAAGTTCTTCCCAGACTATTCAAAATCAAGTATGAAAGTGGTACTCTGGAAGAACTTCTCTATGTTGATATGCCCAGTGAATACCATAACTCGTCTGGTCAGATTGTTCTGGACTATGCAAAAGCGATACAGGAAAGTGTTTTTGAGCAGCTTCGTGTTGTTCGTGATGGCCAACTTCGAATAGTTTTCTCCCCAGACCTAAAGATATGTTCGTGGGAATTTTGTGCACGACGCCATGAAGAGCTCATACCCCGAAGATTATTAATACCTCAGGTTAGTCAGCTAGGGGCAGCAGCCCAAAAGTATCAGACTTCTATTCAAAATGCATCATCCAATTTATCTGCTTCGGAGTTGCAAAATAATTGTAATACGTTTGTAGCATCAGCTCGACAATTGGCTAAAGCTTTGGAGGTTCCATTAGTGAATGATTTAGGATATACAAAGAGATATGTGCGGTGTCTTCAGATATCTGAAGTGGTCAATAGTATGAAAGACTTGATTGATTACAGCCGTGAAACAGGGACTGGACCAATGGATAGTTTGGCCAAGTTTCCTCGGAGAACAAGTCCTTCATCTGGGTTTAACAGTCAAGCACAACAGCCTGAGGAACAGTTACTTCAACAGCATCAGCATCAGCATCAGCAGCAGCAACAAGCAGTTGTCCCCAACCCAAACATGGACCAAACCTCGGTGCAAACTGCCCCTATGCAACTTGCTACAACCAATGGAGTGACTAATAATCCCGTAAACCCATCTCCGGCCTCTGCCTCGACTTCTGCAAGCACAATTGTTGGTCTACTCCACCAAAACTCCATGAAGTCCAGACAGCAAAATGCAGCCAGCCCCTATGCAGGAGGAAATACAGGGAAGATCTCATCCCCGGCCTCTTCTGGTCCAATCCCACAAGCCCAGCCCAACAATCCTTCCTCATTCCAAGCCCCAATTCCCACATCAGCCAACAATCCTCCTCAAAGTGGTGTATCCCCCGCCAACAACCACATGAGCACGGCAAACACTCCGGTCAATGTCTCCTTGCAGCAACCAACACTATCTGGAGAAACTGATGCAAGTGATTCCCAAAGCTCCGTCCAGAAAATCTTACAGGAAATGATGATGTCAAGTCAAATGAATGGCCCAGTTAGTAGCATGGGCGGAGTTGGTCCAATTGGAAACGATGTAAAAAACAGTGTCAATGGGATTGTTCGGACAAACAAAAACAGTAACTGTCTGGTTGGAAATGGGATGGTAAACAGTAATTCTGGTGTTGGAGGTGGTGGATATGGCAATATGAGTATGGTTAATGGGATTAGGTCAAATATGGTAAACAATTTGGTTATGAATGGAAGGATGGGAATAGCGACTTTGGTGCGAGAACAGGGTATGAATCATCATCATCAGCAAGATTTAGGAGACCAGCTTCTGAGTGGACTTGGAGCTGTTAATGGCTTTAATAATCTTCAGTTCGATTGGAAGCCGTCACCTTGA 2733 45.7 MVSSGTHTPMGGPQSVSPSLLRSNSGMLGAQGGPPQTNFPSLVSPRTPFTNMNMLGNMVNVSSLLNQSFGNGGPSSGLSGSGGSQRGGGVNPNSEADPLSGVGNGMSFNNPSSSFVASNMANPGSSGQGQGSQFSNLANSQLLSDHQHSHQLEPQNFQQNQQPIHQFSGSQSTQQQQQQQQFQVIRGGGGLGGVGPVKLEPQLTSNDHQQGQLTQQALRNLGPVKLESQRLQPSRTLVPVKMEPQQSDQSVFLHQQQQQQQQQQQQQHFFHMSRQPSQAAAAQINLLHQQRLLQLQHQQQQQQQQQQQLLKSMPQQRPQLQQQNVPLRSLGKPLYEPGMCARRLTHYMCQQQNRPENNNIEFWRKFVTEYYAPHAKKKWCVSMYGNGRHTTGVFPQDVWHCEICNRKPGRGFEATLEVLPRLFKIKYESGTLEELLYVDMPSEYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTSIQNASSNLSASELQNNCNTFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSPSSGFNSQAQQPEEQLLQQHQHQHQQQQQAVVPNPNMDQTSVQTAPMQLATTNGVTNNPVNPSPASASTSASTIVGLLHQNSMKSRQQNAASPYAGGNTGKISSPASSGPIPQAQPNNPSSFQAPIPTSANNPPQSGVSPANNHMSTANTPVNVSLQQPTLSGETDASDSQSSVQKILQEMMMSSQMNGPVSSMGGVGPIGNDVKNSVNGIVRTNKNSNCLVGNGMVNSNSGVGGGGYGNMSMVNGIRSNMVNNLVMNGRMGIATLVREQGMNHHHQQDLGDQLLSGLGAVNGFNNLQFDWKPSP 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6346743 6354500 + Conep17aG0082000.1 Cone17ag0802 456279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0802 910 MobiDBLite consensus disorder prediction 186 211 - -
Cone17ag0802 910 MobiDBLite consensus disorder prediction 162 181 - -
Cone17ag0802 910 MobiDBLite consensus disorder prediction 305 325 - -
Cone17ag0802 910 Pfam LIM-domain binding protein 343 597 IPR029005 -
Cone17ag0802 910 MobiDBLite consensus disorder prediction 688 754 - -
Cone17ag0802 910 MobiDBLite consensus disorder prediction 242 277 - -
Cone17ag0802 910 MobiDBLite consensus disorder prediction 601 645 - -
Cone17ag0802 910 MobiDBLite consensus disorder prediction 1 45 - -
Cone17ag0802 910 MobiDBLite consensus disorder prediction 587 645 - -
Cone17ag0802 910 MobiDBLite consensus disorder prediction 70 134 - -
Cone17ag0802 910 PANTHER LIM DOMAIN-BINDING PROTEIN 1 902 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0802 Cone-Chr17:6346743 Cone5ag0840 Cone-Chr5:3596482 1.07E-104 dispersed
Cone17ag0802 Cone-Chr17:6346743 Cone20ag0406 Cone-Chr20:1971557 0 wgd
Cone17ag0802 Cone-Chr17:6346743 Cone4ag1452 Cone-Chr4:11511786 9.46E-270 wgd
Cone17ag0802 Cone-Chr17:6346743 Cone7ag1480 Cone-Chr7:10392817 1.39E-254 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0802 - - - 0.0