Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0810 ATGGCGAAGTATTCCCGTGTTGATGGGAGAAAGCCATGGGGTTGTGGTTCAACAACCTGTATTATTGCATTTCTTGCACTCTCTTTGATTGGAGTGTGGATGTTGCTGATAAACTCTATTGTTCCTGAAAATCCAAACCCGTCTATTCAAGAAGTTAATCACATGAAGGATTTGACTAAAGAAGAGGAGAATGACGAAAACCTGCAAGAGGAGTTTGTGAAAGAGAGATCTTATAAGAATACAAAGTCCGAGAAAGAAATGAAGGAGGTATCTGGAAACGATGGGGATGGGAAAAGGGATGGTTGGGAATCAAGTCGATTAGATGAAGATCTAAATTCACAAGGTGAAGGAAAAGAAACAGTGAGAAGTGAAGAAGATGGCAATGAACAGAATCAGACAGAGCAGAAATTTGTTGAAAGTAAACCAATTATAGAGGAGAAAAGTGGTGAGATAAAGCCAGAAGATAACAGGGTTATCTTGACTGAGGATGAGAAGGTTGATTTAAATCAGGATAAGTATTCGGAAAAATTTTTGACCAAAAATGCGGAAAACCAGGATATGAATCAGGCCTCAACTGAGGAATTTATTTTTGGGAAAGAATCAGAAACTGTGAGCAGAGATACCGATGAACAAGCTGCTTGGTTGTCACAGACAGTTAAGTCTAAGAATGAGAAGGAATCACAACAATCGTTATTAAGTGAATATGAATGGAAACTTTGTAAGACGACTGCAGGGCCTGATTACATTCCTTGCCTTGATAATTGGCAAGTGATTCGAAAGCTTCCTAGTACAGGCCACTATGAACATAGAGAGAGGCATTGCCCTGATGAAGCTCCCACTTGTCTTGTTCCAATGCCTTGGGGGTATAAACGCCCTATTAGGTGGCCCGAAAGCAGGAACAGGATATGGTTCCATAATGCTCCGCACACCAAACTAGGGGAGGTTAAGGGGCATCAAAATTGGGTGAAAGTCAATGGTGATTATCTTACATTTCCTGGTGGTGGAACTCAGTTTAAGAATGGGGCGCTCCATTACATTGATTTCATTCAAAAGTCTCTTCCAAGGATCGCTTGGGGTAAAAGAACCCGTGTAGTATTGGATATCGGCTGTGGTGTAGCCAGCTTTGGAGGTTTCCTGTTCGACAGAGGGGTTCTTACAATGTCAATTGCTCCAAAGGATGAGCATGAAGCTCAAGTCCAATTTGCACTCGAGCGTGGAATCCCAGCAATACTAGGTGTCATGGGAACAAAGAGACTACCATTTCCTGGCACTGTCTTTGATGTTGTCCATTGTGCTCGCTGTAGAGTTCCCTGGCACATTGAAGGGGGTAAACTTCTCTTAGAGCTTAATCGTGTCTTAAGACCCGGAGGGTACTTTGTTTGGTCTGCTACTCCAGTTTACCAGAAGCTTCCAGAAGATGTTGGGATATGGAAAGCTATGTCTAGACTGACAAAATCAATGTGCTGGGACCTGATCACAATCAAAAGGGACAGAGTGAATGCAGTGGCAGCAGCGATATACAGAAAACCAACTTCCAATGAATGCTATAAGCAGAGAACACAAAAGGAACCTCCACTCTGCAAAGAATCTGATGATCTCAATAAAGCCTGGAATGTATCACTACGAGCTTGTATGCACAAAGTGGCTGTAGATGCTTCAGAGCAGGGGTCAAGCTGGCCTGAGCAGTGGCCATTGAGGCTGCAAAAACCACCCAAATGGTTAAACTCTCATGTTGGTGTTTATGGTAAAACTTCACCAGGGGACTTCACTGCTGAGTACAGACACTGGAATAATGTTTTTTCCCAGTCATATCTAGATGGGATGGGAATTGACTGGTCCTTTGTGCGGAATGTCATGGATATGAGAGCTGTATATGGAGGGTTTGCTGCTGCACTGGCAGACTTGAAAGTATGGGTTATGAATGTAGTTCCAATAGATTCTCCCAACACTCTCCCTATAATTTACGAGCGAGGTTTACTGGGCATATATCATGATTGGTGTGAATCGTTCAACACTTACCCTAGGTCTTACGATCTTCTCCATGCAGATCGTCTCTTCTCCAGACTCAAAAAGAGGTGCAATATAATGGCAGTGATTGCAGAAGTTGATAGGATTTTGAGGCCAGAAGGAATACTAATCATATGGGACGATATGGAAACAGTTAATTTGCTGGAGAATCTGGCCAAGTCTCTGAAGTGGGAGATCAGATTGTCTATTTCAAAAGACAAAGAGGGTTTGCTCTGTCTGAAGAAGAAGTTTTGGCGTCCCACCGTGCCTGAACTCATTGCTGCAGCCAATGTTCAAGCTTAA 2310 42.9 MAKYSRVDGRKPWGCGSTTCIIAFLALSLIGVWMLLINSIVPENPNPSIQEVNHMKDLTKEEENDENLQEEFVKERSYKNTKSEKEMKEVSGNDGDGKRDGWESSRLDEDLNSQGEGKETVRSEEDGNEQNQTEQKFVESKPIIEEKSGEIKPEDNRVILTEDEKVDLNQDKYSEKFLTKNAENQDMNQASTEEFIFGKESETVSRDTDEQAAWLSQTVKSKNEKESQQSLLSEYEWKLCKTTAGPDYIPCLDNWQVIRKLPSTGHYEHRERHCPDEAPTCLVPMPWGYKRPIRWPESRNRIWFHNAPHTKLGEVKGHQNWVKVNGDYLTFPGGGTQFKNGALHYIDFIQKSLPRIAWGKRTRVVLDIGCGVASFGGFLFDRGVLTMSIAPKDEHEAQVQFALERGIPAILGVMGTKRLPFPGTVFDVVHCARCRVPWHIEGGKLLLELNRVLRPGGYFVWSATPVYQKLPEDVGIWKAMSRLTKSMCWDLITIKRDRVNAVAAAIYRKPTSNECYKQRTQKEPPLCKESDDLNKAWNVSLRACMHKVAVDASEQGSSWPEQWPLRLQKPPKWLNSHVGVYGKTSPGDFTAEYRHWNNVFSQSYLDGMGIDWSFVRNVMDMRAVYGGFAAALADLKVWVMNVVPIDSPNTLPIIYERGLLGIYHDWCESFNTYPRSYDLLHADRLFSRLKKRCNIMAVIAEVDRILRPEGILIIWDDMETVNLLENLAKSLKWEIRLSISKDKEGLLCLKKKFWRPTVPELIAAANVQA 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6412094 6416125 + Conep17aG0082900.1 Cone17ag0810 456287

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0810 769 Gene3D Vaccinia Virus protein VP39 339 538 IPR029063 -
Cone17ag0810 769 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 247 745 IPR004159 GO:0008168(InterPro)
Cone17ag0810 769 MobiDBLite consensus disorder prediction 59 132 - -
Cone17ag0810 769 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 271 520 IPR029063 -
Cone17ag0810 769 CDD AdoMet_MTases 365 460 - -
Cone17ag0810 769 MobiDBLite consensus disorder prediction 59 137 - -
Cone17ag0810 769 FunFam probable methyltransferase PMT23 337 521 - -
Cone17ag0810 769 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 18 754 IPR004159 GO:0005737(PANTHER)|GO:0005768(PANTHER)|GO:0005802(PANTHER)|GO:0008168(InterPro)
Cone17ag0810 769 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 615 733 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0810 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0014 Cone-Chr12:142799 Cone17ag0810 Cone-Chr17:6412094 0 dispersed
Cone17ag0810 Cone-Chr17:6412094 Cone8ag0008 Cone-Chr8:100176 1.74e-318 dispersed
Cone17ag0810 Cone-Chr17:6412094 Cone20ag0417 Cone-Chr20:2030161 8.78E-56 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g193 Blo01g01561 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone17ag0810 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000953 3 2 4 3 4 2 4 2 2 3 2 2 4 2 2 4 2 6 4 2 3 2 2 2 2 2 2 5 3 3 85