Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag0870 | ATGGCCGAGCAAGCAGCCTCCATTCGTGTCACTCGCGCCGCCGTGAAGAGAAAGACAGCTTCTGCCAAGCCGGAGGACTTGTCGTCCAGGAAGAAGCGGGTGGTTCTGGGAGAGATTCAGAATGTACAGAACGTCATCGATCCAGTAGAGCTGAAGTCAAAGATTTTGCCGCAGAAACATAAAACTAGGGCTCAGACGAAGGTCAAGAATGTGAATACTGTAGTCAAGGGCACTGATTCATACAAGCTGGAAACGGATGCCGGTTTAGAGGATTCACAAAATTGTTCGCCCTATGCTTCTGATATTTATGGATATCTTCGCAAAATGGAGGTGGAATCGAAGAGAAGGCCATTACCTAATTACATAGAGAAGATTCAGAGTGATGTGAGCCTGAATATGAGAGCGGTTTTGGTCGATTGGCTGGTGGAGGTAGCAGAGGAATACAAGCTTCTTTCAGACACACTTTACCTCTCTATTTCTTATATCGATAGGTTCTTATCATTGAATGAACTCAGAAGGCAGAAGCTACAATTACTTGGCGTTTCTTCAATGCTCATTGCCTCAAAGTATGAAGAGATTACTCCTCCAAATATGGAAGATTTCTGCTACATCACTGACAATACGTACACCAAAGAAGAGTTGATGATAATGGAGGCTGATGTACTTAAGTCTTTGAATTTTGAAATGGGGAATCCAACAACCAAGACGTTTCTAAGAAAGTTCATCGATCTTGCTCAAGAAAATGATAAAAAACCAAATTCGCAGTTGGAATTCCTAAGCTATTACATTGCCGAGCTAAGCTTGTTGGATTATAAATGCGTGAAGTTCTTGCCTTCTTTGGTGGCTGCAGCTGTTACCTTTTTTGCAAAATTCATTATTCAACCAACCGTTCATCCTTGGTATTCTAAGATTGAGCAATATTCTGGATACAAGCCATCTGAATTAAAGGAATGTGTCCTCATTTTACATGAATTGCATACCTCTAAAAGCTTTAGAGGTGTGCCCCTCCGAGCTGTGAAGGAAAAATACAAGCATCCAAAGTTTGAACGTGTCTCAAATTTGTGCACACCATCAGAGATTCCAGCTTCTTATTTCGAAGATGCTTGA | 1107 | 41.73 | MAEQAASIRVTRAAVKRKTASAKPEDLSSRKKRVVLGEIQNVQNVIDPVELKSKILPQKHKTRAQTKVKNVNTVVKGTDSYKLETDAGLEDSQNCSPYASDIYGYLRKMEVESKRRPLPNYIEKIQSDVSLNMRAVLVDWLVEVAEEYKLLSDTLYLSISYIDRFLSLNELRRQKLQLLGVSSMLIASKYEEITPPNMEDFCYITDNTYTKEELMIMEADVLKSLNFEMGNPTTKTFLRKFIDLAQENDKKPNSQLEFLSYYIAELSLLDYKCVKFLPSLVAAAVTFFAKFIIQPTVHPWYSKIEQYSGYKPSELKECVLILHELHTSKSFRGVPLRAVKEKYKHPKFERVSNLCTPSEIPASYFEDA | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 6897358 | 6899174 | - | Conep17aG0089000.1 | Cone17ag0870 | 456347 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag0870 | 368 | PIRSF | Cyclin_A_B_D_E | 2 | 364 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Cone17ag0870 | 368 | ProSitePatterns | Cyclins signature. | 134 | 165 | IPR048258 | - | |
Cone17ag0870 | 368 | Gene3D | - | 101 | 353 | - | - | |
Cone17ag0870 | 368 | SUPERFAMILY | Cyclin-like | 232 | 358 | IPR036915 | - | |
Cone17ag0870 | 368 | Pfam | Cyclin, N-terminal domain | 101 | 229 | IPR006671 | - | |
Cone17ag0870 | 368 | Gene3D | - | 117 | 230 | - | - | |
Cone17ag0870 | 368 | Pfam | Cyclin, C-terminal domain | 232 | 355 | IPR004367 | - | |
Cone17ag0870 | 368 | FunFam | Mitotic cyclin 6 | 117 | 217 | - | - | |
Cone17ag0870 | 368 | FunFam | Cyclin A1 | 218 | 353 | - | - | |
Cone17ag0870 | 368 | SMART | cyclin_7 | 139 | 223 | IPR013763 | - | |
Cone17ag0870 | 368 | SMART | cyclin_7 | 236 | 324 | IPR013763 | - | |
Cone17ag0870 | 368 | SUPERFAMILY | Cyclin-like | 90 | 229 | IPR036915 | - | |
Cone17ag0870 | 368 | PANTHER | CYCLINS | 76 | 345 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone17ag0870 | 368 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cone17ag0870 | 368 | SMART | Cyclin_C_2 | 232 | 357 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0870 | Cone-Chr17:6897358 | Cone20ag0217 | Cone-Chr20:931327 | 8.64E-223 | dispersed | |
Cone17ag0869 | Cone-Chr17:6892006 | Cone17ag0870 | Cone-Chr17:6897358 | 1.49E-121 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag0870 | K06627 | - | cit:102611949 | 437.573 |