Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone17ag0894 | ATGGGGAGAGGAGATAAACCATCCAATTTCTCAGATATCGTGGACGAGGATGACCTCGACGAAGAGCCCGGCGAGGAGATCGAATCGGCTCCTCCTCTCAACGTCGGCGAAGAGCGAGAAATCGGTGTCTCCGGCATCAAGAAGAAGCTCCTCAAGCGGGGAAGAGGATGGGAGCCTCCCGAATTTGGTGACGAAGTCACTGTGCATTATGTGGGAACTTTACTTGACGGTACCAAGTTCGATTCCACTAGAGATAGGGATGAGCCCGTGACATTTAAGCTCGGTCATGGTGAAGTGGTTGCTGGTTTGGACCATGCCGTAACCACAATGAAGATGAAAGAAATTGCATTGTTCACATTGCCTTCTGAGTTAGGTTATGGAGATGTGGGCCCCAGTGGCGTTCCACCATTTTCATCTATTCGGTTTGAAATAGAACTCGTTTCATGGATCACAGTGGTGGATATATACAAAGATGGTGGAATTATTAAGAAGATAATGGAGAAGGGAGTTGGGAATGAGAGACCGAGCGATCTAGATGAAGTTCTTGTTAAGTATCAAGTGAGATGTGATGATAGTGCTACTATTGCTGCACAAACACCGGCAGAGGGGACTGAGTTCTATGTCAGAGATGGCCATTTTTGTCCAGCATTGCCCAAGGCAATCACTACAATGACAAAGGGAGAGAAAGCCAAGTTAATTGTCCAACCCAAGTATGCCTTTTTCGGAGAAGGAACAGGTTCAAATGATGAGGTCCAACTCATTTCTCACGGCTCTTTTTTGAACATTGATTTGGAATTGGTGTCCTTCAAGCCTGTTATTGACATTACTGGCGACTCCAAGGTGATGAAAAAGATTTTGAAAGAAGTCAGTTATTTGGCTAGGCTAGAAAATGGCACTATATTTGAGAAAAGAGGAATTGATGGAGATCAACCTTTGGAGTTCATCACAGATGAGGAGCAAGTAGTTGCTGGCTTAGACCGAGCAGTGGCTACAATGAAGAAAGGTGAGCAGGCCGTATTAACCATACATTGCGATTATGCATTTGGGAATATTGAAGTGAAAAGGGACCTCTTGATTGTTCCACCATGTTCAAATGTAGTCTATGAAGTTGAAATGTTAGATTTTATCAAGGAAAAAGCACCATGGGAGATGAGTAATCATGAACAAATCGAAGCAGCTAAGCAGAAGAAAGAAGAAGGAAATCTACTTTTTAAAAATGGGGAGTATCAGCGAGCAGGCAAAAAGTACAACAAGGCCTTGAACTATGTTAGTGAAGATGGAAATTTTGAGGATGATGAGCTAACTGTAGCTAAGTCATTAAGAATCTCTTGCTGGTTGAACGGTGCTGCTTGTAGTCTTAAAGTAAATGACTCCATGGAAGCAATCAAATTATGTTCAAAGGTACTGGATGTTGAATCTCACAATGTGAAAGCTTTGTTTAGAAGGGCACAAGCTTACATCGAAACGTCGGATTTGATATTGGCCGAATTGGATATCTCAAAAGCTCTTGAAATCGATCCTCATAACAGGGAAGTGAGGTCAATGCAGAAGACTTTGAAACAAGTTCAAGCTGAGAACGATAAGCAGGATGCAAAAATCTATGCAAACATGTTTGCGCCTAAAAAAAAATTGAAAGTTGAGAAAGCGGGGGGAACAAAGGAAGAGATCACGGAACCTGAACCGGAAATAGTCGAGGAATCTCTCTCCAACAATAAATAG | 1719 | 42.64 | MGRGDKPSNFSDIVDEDDLDEEPGEEIESAPPLNVGEEREIGVSGIKKKLLKRGRGWEPPEFGDEVTVHYVGTLLDGTKFDSTRDRDEPVTFKLGHGEVVAGLDHAVTTMKMKEIALFTLPSELGYGDVGPSGVPPFSSIRFEIELVSWITVVDIYKDGGIIKKIMEKGVGNERPSDLDEVLVKYQVRCDDSATIAAQTPAEGTEFYVRDGHFCPALPKAITTMTKGEKAKLIVQPKYAFFGEGTGSNDEVQLISHGSFLNIDLELVSFKPVIDITGDSKVMKKILKEVSYLARLENGTIFEKRGIDGDQPLEFITDEEQVVAGLDRAVATMKKGEQAVLTIHCDYAFGNIEVKRDLLIVPPCSNVVYEVEMLDFIKEKAPWEMSNHEQIEAAKQKKEEGNLLFKNGEYQRAGKKYNKALNYVSEDGNFEDDELTVAKSLRISCWLNGAACSLKVNDSMEAIKLCSKVLDVESHNVKALFRRAQAYIETSDLILAELDISKALEIDPHNREVRSMQKTLKQVQAENDKQDAKIYANMFAPKKKLKVEKAGGTKEEITEPEPEIVEESLSNNK | 572 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 7037509 | 7042099 | - | Conep17aG0091500.1 | Cone17ag0894 | 456371 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone17ag0894 | 572 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 284 | 376 | IPR001179 | GO:0003755(InterPro) | |
| Cone17ag0894 | 572 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 172 | 266 | IPR001179 | GO:0003755(InterPro) | |
| Cone17ag0894 | 572 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 58 | 147 | IPR001179 | GO:0003755(InterPro) | |
| Cone17ag0894 | 572 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 288 | 373 | IPR001179 | GO:0003755(InterPro) | |
| Cone17ag0894 | 572 | SUPERFAMILY | FKBP-like | 288 | 394 | - | - | |
| Cone17ag0894 | 572 | SUPERFAMILY | FKBP-like | 41 | 151 | - | - | |
| Cone17ag0894 | 572 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 27 | 148 | IPR050754 | - | |
| Cone17ag0894 | 572 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 63 | 150 | IPR001179 | GO:0003755(InterPro) | |
| Cone17ag0894 | 572 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 178 | 270 | IPR001179 | GO:0003755(InterPro) | |
| Cone17ag0894 | 572 | Gene3D | Tetratricopeptide repeat domain | 381 | 536 | IPR011990 | GO:0005515(InterPro) | |
| Cone17ag0894 | 572 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Cone17ag0894 | 572 | Gene3D | - | 153 | 269 | IPR046357 | GO:0003755(InterPro) | |
| Cone17ag0894 | 572 | FunFam | Peptidylprolyl isomerase | 381 | 536 | - | - | |
| Cone17ag0894 | 572 | MobiDBLite | consensus disorder prediction | 548 | 572 | - | - | |
| Cone17ag0894 | 572 | SUPERFAMILY | TPR-like | 384 | 537 | IPR011990 | GO:0005515(InterPro) | |
| Cone17ag0894 | 572 | Coils | Coil | 512 | 532 | - | - | |
| Cone17ag0894 | 572 | SMART | tpr_5 | 393 | 426 | IPR019734 | GO:0005515(InterPro) | |
| Cone17ag0894 | 572 | SMART | tpr_5 | 442 | 475 | IPR019734 | GO:0005515(InterPro) | |
| Cone17ag0894 | 572 | SMART | tpr_5 | 476 | 509 | IPR019734 | GO:0005515(InterPro) | |
| Cone17ag0894 | 572 | SUPERFAMILY | FKBP-like | 156 | 284 | - | - | |
| Cone17ag0894 | 572 | Gene3D | - | 270 | 380 | IPR046357 | GO:0003755(InterPro) | |
| Cone17ag0894 | 572 | Gene3D | - | 37 | 152 | IPR046357 | GO:0003755(InterPro) | |
| Cone17ag0894 | 572 | ProSiteProfiles | TPR repeat profile. | 476 | 509 | IPR019734 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone14ag0548 | Cone-Chr14:2729130 | Cone17ag0894 | Cone-Chr17:7037509 | 5.76E-174 | dispersed | |
| Cone17ag0894 | Cone-Chr17:7037509 | Cone19ag0647 | Cone-Chr19:5542991 | 2.25E-89 | dispersed | |
| Cone17ag0894 | Cone-Chr17:7037509 | Cone15ag0569 | Cone-Chr15:2863758 | 9.00E-183 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone17ag0894 | K09571 | - | mdm:103455872 | 736.873 |