Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0903 ATGGCGCCGTCTTTTGATTGGTGGGGTAGGAAGAAGAAGAAGGAGAAGAAGAGCCACAGAGGAGCTCCAGTCGTCCTGAAAATGGAGAATCCTAACTGGTCCATGGTCGAGCTCTCCCTGCCTTCTGACGAAGAACTTCTCACACCAGACTCGCCGAGTACACTCGGAGATAAATCCCGAGGCAGGAAGAACAATGCTAAGCATCTCACTTGGGTCCTCTTCCTCAGAGCTAACAAAGCTGCAGGCTGTTTAAGCTTCATTGCCTCTACAATTGCTGGACTAGCCTCCGCAGTAAAACGCCGTCTCGCTTCCGGTCGCACCGACGCCGACATCGATTCCACCACCGTTTCCGGCGGAGGAAGAGAGAAGGAGAATCCCGCCGTGAAGACCAGGTTCTATTCGTTCATCAAGGTGTTCTTATGGTTATCGCTGATTCTGTTAGGGTTTGAGATAGCAGCGTATTGCAAAGGATGGCATTTCGGAGCTCCGAATCTTCAATTGGATCGTATATGGGCGGCCCAATTTAGAGTCAAGGACGTCTTCGATTGGGCTTACTCTAAATGGGTTATGATTCGGGTCGAATATTTAGCTCCACCACTCCAATTCCTAGCCAATGTATGCATTATACTCTTCCTGATTCAGAGTGTAGATAGGCTTGTTCTCTGCTTGGGCTGTTTCTGGATCAAGTTTAAGAAGATCAAACCCGTCCCAAAAGGAGCTCCCCTTGATCTCGAATCTGGCGAAAATGGTTACTTCCCTATGGTTCTTGTTCAGATCCCCATGTGCAACGAAAGAGAGGTTTATCAGCAATCAATTGGTGCTGTATGCAATTTAGACTGGCCGAGATCGAAGATACTAATACAAGTTCTTGACGATTCGGACGATCCGGCAGCTCAGTTACTGATCAAAGAAGAGGTTCGGAGATGGCAGCAAGATGGGGCCAACATAGTGTACAGACATAGGGTGATTAGAGAAGGGTATAAAGCAGGTAATCTCAAATCGGCCATGAATTGTAGCTCTGTTAAAGACTATGAATTTGTAGCCATTTTCGATGCCGATTTTCAACCCACCTTGGATTTTCTCAAAAAAACAGTCCCTCACTTCAAGGATAACGAGGAGTTAGGATTGGTTCAAGCAAGATGGTCATTTGTGAACAAAGATGAGAACTTACTAACAAGGCTACAGAATATTAACTTGGCGTTCCATTTTGAAGTGGAGCAGCAAGTAAATGGAGTGTACTTGAATTTCTTCGGATTCAATGGAACAGCCGGAGTTTGGAGGATTAAGGCTTTGGAAGAGTCCGGTGGCTGGTTAGAGAGGACCACTGTTGAGGATATGGACATTGCCGTACGGGCCCATCTCCATGGATGGAAGTTCATATTCCTCAATGACGTAGAGTGCCAATGTGAATTGCCGGAATCTTATGAAGCTTACCGGAAACAGCAACATAGATGGCATTCCGGGCCAATGCAGTTGTTTCGCCTTTGTTTACCCGCCATAATTCGAGCTAAGATTAGCATATGGAAGAAATTCAATATGATCTTCCTCTTCTTCCTCCTGAGAAAACTGATCCTCCCCTTCTATTCATTCACCCTCTTCTGCATAATTCTTCCCATGACAATGTTCGTTCCAGAAGCCGAATTACCCGCTTGGGTCGTGTGCTATATCCCTGCCACTATGTCCTTTCTAAATATCCTCCCTGCCCCCAAATCGTTCCCTTTCATTGTCCCCTATCTTCTCTTTGAAAACACAATGTCAGTCACTAAGTTCAATGCCATGGTTTCTGGTCTCTTTCAGCTAGGAAGTGCTTATGAATGGGTTGTTACAAAGAAATCTGGCCGTTCATCTGAGGGCGATCTTGTCTCTTTGGTCGAGAAAGAAGAGCAGAAGCTTCAAAGAGGGGTTTCGGTCCCCAATCTTGGTGAGTTGGAAGAGAAGGTTGTAAATCAGAAGCAGCAAAAGGGTTTGAAGAAAAAGCATAATAGGATATATACGAAGGAGTTGGCTTTGGCTTTTTTGCTTCTGACGGCTGCTGCTAGGAGTCTGCTATCGGCTCAAGGGATCCATTTCTACTTCTTGCTTTTTCAAGGGGTTTCCTTCTTGCTTGTGGGTTTGGATTTGATCGGCGAGCAAGTTGATTGA 2142 45.8 MAPSFDWWGRKKKKEKKSHRGAPVVLKMENPNWSMVELSLPSDEELLTPDSPSTLGDKSRGRKNNAKHLTWVLFLRANKAAGCLSFIASTIAGLASAVKRRLASGRTDADIDSTTVSGGGREKENPAVKTRFYSFIKVFLWLSLILLGFEIAAYCKGWHFGAPNLQLDRIWAAQFRVKDVFDWAYSKWVMIRVEYLAPPLQFLANVCIILFLIQSVDRLVLCLGCFWIKFKKIKPVPKGAPLDLESGENGYFPMVLVQIPMCNEREVYQQSIGAVCNLDWPRSKILIQVLDDSDDPAAQLLIKEEVRRWQQDGANIVYRHRVIREGYKAGNLKSAMNCSSVKDYEFVAIFDADFQPTLDFLKKTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVYLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRAKISIWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKEEQKLQRGVSVPNLGELEEKVVNQKQQKGLKKKHNRIYTKELALAFLLLTAAARSLLSAQGIHFYFLLFQGVSFLLVGLDLIGEQVD 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7115534 7118035 - Conep17aG0092700.1 Cone17ag0903 456380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0903 713 MobiDBLite consensus disorder prediction 1 23 - -
Cone17ag0903 713 SUPERFAMILY Nucleotide-diphospho-sugar transferases 255 531 IPR029044 -
Cone17ag0903 713 FunFam probable xyloglucan glycosyltransferase 5 246 471 - -
Cone17ag0903 713 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 181 712 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cone17ag0903 713 Pfam Glycosyl transferase family group 2 347 549 IPR001173 -
Cone17ag0903 713 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 246 470 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1347 Cone-Chr11:9861805 Cone17ag0903 Cone-Chr17:7115534 3.35E-134 dispersed
Cone17ag0903 Cone-Chr17:7115534 Cone4ag1865 Cone-Chr4:13366518 0.00E+00 dispersed
Cone17ag0903 Cone-Chr17:7115534 Cone20ag0246 Cone-Chr20:1089883 0 wgd
Cone17ag0903 Cone-Chr17:7115534 Cone4ag1635 Cone-Chr4:12361036 0 wgd
Cone17ag0903 Cone-Chr17:7115534 Cone7ag1317 Cone-Chr7:9641464 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0903 - - - 0.0