Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0926 ATGGCCAGCGCGACCTGTGGAAGCACCGAGGTAGAGTCCTGTAGGGATGACTCTGCAGCGTTCGTTCTCAAACTCATTGCCATAGCTTCCATCCTCATTGCTGGAGTGGTCGGAATTGCCATTCCACTGCTTGGAAAGCACCAGAAGTTTCTCAAAACCGACAGCAATGCCTTCGTGACCGCCAAAGCCTTTGCAGCCGGCGTGATTCTCGCGACGGGATTCGTCCACATGTTATCGGGCGGGTCCAAAGCCCTTTCAGACCCTTGCTTGCCCGAATACCCTTGGTCTAAGTTCCCCTTTTCGGGTTTCTTCACCATGATGGCCTCACTCCTCACTCTCCTTGTCGACTTTGTCGGAAGCCAGTATTACGAGCGGAAACAGGGGATTGCTTGGGCCAATGATGAGCAAGTCCAGATTGGGTCTGTGGACCCGGGCTTGGAATCGAGCGTTAGTGTTCAGGTCGTTGGGCCTAATGAGAGGAATGAGAAGGTGTTTGGAGAAGAAGAAGGTGGTAGAATGCACATCATTGGAATGCATGCTCATGCGGCTCATCATAGCCATAACCACCCTCATGGAAAGGAAGCATGCGAGGGTCGCGTGAAGGAACATTCTCAGTCTCAGTCTCGTACTCATAGTCATACTCATGGCCATGGATATTCACATGGCTTCGAAGAAGATGGAGATGACAATGGTGTTAGACATGTTGTAGTTTCTCAGATACTAGAACTTGGAGTTGTATCACATTCAGTGATAATCGGGTTATCGCTTGGAGTTTCACAGAGTCCTTGTACAATACGACCATTAATAGCAGCCTTGTCTTTTCATCAATTCTTTGAAGGATTTGCGCTGGGAGGGTGTGTTTCTCAGGCTCAATTCAACACCCTCTCATCGACTCTAATGGCGTGTTTTTTCGTGGTGACTACTCCGGCAGGTATTGGGATAGGGACTGCTATCGCATCGCTTTATAATGCGAATAGCCCAGGAGCTTTGGTTACAGAAGGGATATTGGATTCCATGTCGGCCGGGATTTTGGTGTATATGGCTTTGGTTGATTTGATTGCTGCTGATTTTCTGAGTAAGAGGATGAGATGCAATTTTAGGGATAGATTCGTCAATTCACCCTTAAAATTATGTTTTTACGTTACCTATATAAGTAGGGGTGGGCAAAACTCTCGGGACTGGCTAGGACTTGATCCTTTCGAGATTGAGACGGTATTATATCGGGATTTCTGA 1233 47.77 MASATCGSTEVESCRDDSAAFVLKLIAIASILIAGVVGIAIPLLGKHQKFLKTDSNAFVTAKAFAAGVILATGFVHMLSGGSKALSDPCLPEYPWSKFPFSGFFTMMASLLTLLVDFVGSQYYERKQGIAWANDEQVQIGSVDPGLESSVSVQVVGPNERNEKVFGEEEGGRMHIIGMHAHAAHHSHNHPHGKEACEGRVKEHSQSQSRTHSHTHGHGYSHGFEEDGDDNGVRHVVVSQILELGVVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCVSQAQFNTLSSTLMACFFVVTTPAGIGIGTAIASLYNANSPGALVTEGILDSMSAGILVYMALVDLIAADFLSKRMRCNFRDRFVNSPLKLCFYVTYISRGGQNSRDWLGLDPFEIETVLYRDF 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7271060 7272630 - Conep17aG0095100.1 Cone17ag0926 456403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0926 410 MobiDBLite consensus disorder prediction 189 209 - -
Cone17ag0926 410 MobiDBLite consensus disorder prediction 184 225 - -
Cone17ag0926 410 Pfam ZIP Zinc transporter 23 366 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cone17ag0926 410 PANTHER ZINC/IRON TRANSPORTER 20 361 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cone17ag0926 410 NCBIfam ZIP zinc/iron transport family 6 372 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0926 Cone-Chr17:7271060 Cone8ag1604 Cone-Chr8:11878688 4.92E-78 dispersed
Cone17ag0926 Cone-Chr17:7271060 Cone20ag0270 Cone-Chr20:1203835 2.68E-209 wgd
Cone17ag0926 Cone-Chr17:7271060 Cone4ag1663 Cone-Chr4:12488667 6.11E-169 wgd
Cone17ag0926 Cone-Chr17:7271060 Cone7ag1290 Cone-Chr7:9516202 1.08E-173 wgd
Cone17ag0926 Cone-Chr17:7271060 Cone7ag0057 Cone-Chr7:249044 3.53E-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0926 K14709 - rcu:8259584 521.161