Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0933 ATGGGTGCTGCTTCTGGAAAATGCGTTAAAGCTCTAATAGGGTTTAATAAAAATCCAGAAAAAGAAAACCAGGAGAAGGTGGGTGGGAAGGGGAAGAAATGGAGGCTATGGAGGAGGAGCTCGTCATCATCATGGGATTTTTGTAAAGGGAAGGAGAAGAGAGCATCTTCTGAAAGCTCTGATTCTTTGTCAGCAGCCATGGCTAAAGTGCTAAGAGCTCATCCTAAGGACTTCAAGCTCGTCAAGAAAGAGTGGGCTGCTATCCGCATTCAAACTGCCTTTCGCGCCTTCTTGGCAAGACGTGCCATGAAAGCTTTGAAAGGAGTGGTGAGACTTCAAGCCCTAGTCCGGGGCCGACAGGTGCGAAAACAGGCTGCCGTAACTCTAAGGTGTATGCAAGCCCTAGTCCGAGTCCAGGCACGGGTCAGGGCTCGTCGTGTCCGAATGTCTTTTGAAGGACGGGCCGTTCAACAGGTGCTCGAAGAACACCGTAGCAAGGCCGACCTCTTAAAGCAAGCCGAGGAAGGATGGTGTGATAGAAAAGGAACATTGGATGATGTTAAGACAAAGATACAAATGAGACAACAAGGAGCTCTTAAGAGAGAGAGAGCAATTGCATACTCACTCGCTCAAAAGCAATGGAAGTCAACCCCGAATCGATCAAATACAAACCCTTTCACTTTACAAAACAATAACGAGTTCAACAAGAACAGTTGGGGATGGAGTTGGCTCGAACGATGGATGGCAGCAAAACCCTGGGAGAGTCGTTTGATTGAACCTTCGCAGACCGTGGATTCTTCAAAACCTTTTCTCAACTACTCCGCAGAGATGAAGAAACACGTAAGGAATTCCAGAACATGTTCTTCTCCTATGGTTAAGGTTAGGAAGAACAATGTAACGACAAGGATTAGTGCAAGGCCAGTTTATAAGTCTTGTTCGAGCCCGAGTTCTGAGTTGTTGCACGACGAGAGCTCTGCTACTTCTTCTTCTATCTGCACTTCAACAACTCCAGTTTCTGCTAACACTGTTGTTCAAGACAAGGAAACTTGTCCGGGATATATCGACCCGACGGAATCAATGAAAGCAAAGTGGAAAACTACACCGAGCAGTCGGAAAAGTACGATGAGGATTCAGAGGCAATCAATGGATGAATTTCAGTTAATTAAGACAACAAAGACACTCCTCCTTCATGAAGATTCCTGA 1203 46.05 MGAASGKCVKALIGFNKNPEKENQEKVGGKGKKWRLWRRSSSSSWDFCKGKEKRASSESSDSLSAAMAKVLRAHPKDFKLVKKEWAAIRIQTAFRAFLARRAMKALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSFEGRAVQQVLEEHRSKADLLKQAEEGWCDRKGTLDDVKTKIQMRQQGALKRERAIAYSLAQKQWKSTPNRSNTNPFTLQNNNEFNKNSWGWSWLERWMAAKPWESRLIEPSQTVDSSKPFLNYSAEMKKHVRNSRTCSSPMVKVRKNNVTTRISARPVYKSCSSPSSELLHDESSATSSSICTSTTPVSANTVVQDKETCPGYIDPTESMKAKWKTTPSSRKSTMRIQRQSMDEFQLIKTTKTLLLHEDS 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7298473 7300571 - Conep17aG0095800.1 Cone17ag0933 456410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0933 400 Pfam IQ calmodulin-binding motif 85 104 IPR000048 GO:0005515(InterPro)
Cone17ag0933 400 ProSiteProfiles IQ motif profile. 83 111 - -
Cone17ag0933 400 PANTHER IQ-DOMAIN 5-RELATED 7 381 - -
Cone17ag0933 400 ProSiteProfiles IQ motif profile. 107 134 - -
Cone17ag0933 400 Gene3D - 80 134 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0933 Cone-Chr17:7298473 Cone1ag0388 Cone-Chr1:3380608 4.07E-44 dispersed
Cone17ag0933 Cone-Chr17:7298473 Cone20ag0275 Cone-Chr20:1221713 1.94E-224 wgd
Cone17ag0933 Cone-Chr17:7298473 Cone4ag1669 Cone-Chr4:12509334 5.65E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0933 - - - 0.0