Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0935 ATGGGCAGCGGTTTTCGACCAGACGACTGCGTTCCAATCAACACCACCGCCGTAGCCATCGACGATGACAAGAACAGTCAACATGCTGTCCGATGGGCCATTAATCATCTCGTGATTAGCAATCCTCTAATTATCATAATTCACGTTAGGCATCATAACAATCAAAGAACGAGTATTGCTGCTGGACATTCTGACGCGCAACATCTTTTCGTTCCCTGCCGTGCATACTGCGCTCGTAAATCGGTCCAATTAAAGGAGGTTGTTGTTGACGATGACGATGTGACCAAAGGACTAGTAGATTATATCCAGAGGAACTGCATAACTAATGTTGTTGTGGGAGCTTCAGCAAGGAGCGCCCTAGCTAGGAGATTCAAGGGAAGTGATGTGCCTTCCAACATATTAAAATCAGCACCGGAATTCTGTTCTGTGTTTGTGATATCAAAAGGGAAAGTAGTTATGAGTAAACCAGCAGCCCGACCGGCTAATAACACTGCAGCCCCACCAAGACAACCATCGCCGCTCGGACTTCCACCTAATGGACATCATCATCATCATCATCATCAAGATCATGCAGCCAGAGGACATCATGGAAGGGGAGGAATGAAACATGCGGCAGAGAAAGGGATGCCAGAACAGACCAGAAATGCAATGAAAGTTTTATCACGTGAAAGACAAAGACTAACCAATTCCTCACTAGATAATCTTGATATTCGGGAATCAAGATCATCATGTAGCCGCAACTCATTATCTGACGAGGATGTTTCTATTCACCTGCGCCAATTTGGTTCAGTAGACATATCTCGCCAGAGTTTAGATTTTGGCGTGACTCAGGCTTCAATGGATTCCTCATCCACCGCAGCTCGAGATCTAGGGGCCGAGATGAGAAGGTTGAAGCTCGAACTAAAGCAAACCATGGATATGTATAGCACTGCTTGCAAAGAAGCAATCGCTGCCAAAAATAAGACGAAGGAACTAAACCAGTGGAAGTTAGAGGAGACAAGGAAGTTCGAAGAAGTGAGGTGTGCTGAAGAGGCAGCCCTGGCCACTGCAGAGATGGAGAAGGCCAAGTGCAAAGCTGCCGTTGAAGCAGCAGAGGCAGCAAGAAGGCTAGCTTATAAAGAAGCGCAGCGAAGAAAACATGCGGAAATGAAGGCCAGACAAGAGGCAGAGGCGAAGAACCGAGCATTGATCGCTTTGTCAAAAAATGACGTCCGGTATAGAAAGTACTCTATAGATGAGATCGAGGAAGCCACGAGTAAACTCTCTGTGACCTTCAAAATAGGTGAAGGTGGGTATGGACCGGTTTATAAGGGCAGACTTGATCACACAGCAGTTGCTATCAAAGTCTTAAGACCCGACGCTGCTCAGGGGCGGAAGCAATTCCAGCAAGAGGTAGAGGTCCTTTGCTGCACACGACATCCGAACATGGTTCTCCTCCTGGGGGCATGTCCGGAATATGGATGCTTAGTATATGAATACATGAGCAATGGAAGCTTAGAAGATCGGATTTTCCACAGAGGAAACACCCCACCAATACCTTGGAGGGTAAGATTCAGAATAGCAGCCGAAATTGCAACCGCACTCTTATTCCTTCACCAAACCAAGCCCGAACCGCTGGTCCATAGAGACCTTAAACCAGCCAACATACTCCTAGATGGCAATTACGTGAGCAAGATAAGCGATGTGGGCCTGGCCCGGTTAGTCCCGCCTTCGGTAGCGGATCAAGTGACCCAATACCACATGACCTCAGCTGCTGGGACGCTTTGTTACATCGATCCAGAGTACCAACAAACCGGAAAGTTAACTACCAAGTCGGATATATACTCATTAGGGATAATGCTGCTTCAGATTATTACTGCTAGGCCCCCTATGGCTATTTTGCATCATGTTCAGAGGGCCATCGACAAGGACAAATTTGCTGAGATGGTGGACCCTGCAGTTACAGATTGGCCAATTGAAGAGACTCTAGCGTTTGCTAAATTGGCGATCAAGTGCGCACAGATGAAGAAGAAGGAAAGGCCTGAACTTGGAACCGTTATAGTGCCTGAACTTAACAGGTTAAGAGATTTTGGAAGAAATTCTGAGCCGCATGGGATCATTTTCGGACACAACAGTGACGTACAGGGGCGGAGCCAGAATTCGGCTACAGTCTGA 2154 47.17 MGSGFRPDDCVPINTTAVAIDDDKNSQHAVRWAINHLVISNPLIIIIHVRHHNNQRTSIAAGHSDAQHLFVPCRAYCARKSVQLKEVVVDDDDVTKGLVDYIQRNCITNVVVGASARSALARRFKGSDVPSNILKSAPEFCSVFVISKGKVVMSKPAARPANNTAAPPRQPSPLGLPPNGHHHHHHHQDHAARGHHGRGGMKHAAEKGMPEQTRNAMKVLSRERQRLTNSSLDNLDIRESRSSCSRNSLSDEDVSIHLRQFGSVDISRQSLDFGVTQASMDSSSTAARDLGAEMRRLKLELKQTMDMYSTACKEAIAAKNKTKELNQWKLEETRKFEEVRCAEEAALATAEMEKAKCKAAVEAAEAARRLAYKEAQRRKHAEMKARQEAEAKNRALIALSKNDVRYRKYSIDEIEEATSKLSVTFKIGEGGYGPVYKGRLDHTAVAIKVLRPDAAQGRKQFQQEVEVLCCTRHPNMVLLLGACPEYGCLVYEYMSNGSLEDRIFHRGNTPPIPWRVRFRIAAEIATALLFLHQTKPEPLVHRDLKPANILLDGNYVSKISDVGLARLVPPSVADQVTQYHMTSAAGTLCYIDPEYQQTGKLTTKSDIYSLGIMLLQIITARPPMAILHHVQRAIDKDKFAEMVDPAVTDWPIEETLAFAKLAIKCAQMKKKERPELGTVIVPELNRLRDFGRNSEPHGIIFGHNSDVQGRSQNSATV 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7322544 7325645 - Conep17aG0096200.1 Cone17ag0935 456412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0935 717 Coils Coil 287 307 - -
Cone17ag0935 717 PANTHER OS02G0152300 PROTEIN 17 693 IPR051348 -
Cone17ag0935 717 Gene3D Transferase(Phosphotransferase) domain 1 494 695 - -
Cone17ag0935 717 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 146 - -
Cone17ag0935 717 SUPERFAMILY Protein kinase-like (PK-like) 404 679 IPR011009 -
Cone17ag0935 717 Gene3D Phosphorylase Kinase; domain 1 370 493 - -
Cone17ag0935 717 CDD STKc_IRAK 427 687 - -
Cone17ag0935 717 Gene3D HUPs 13 148 IPR014729 -
Cone17ag0935 717 CDD STK_N 15 149 - -
Cone17ag0935 717 MobiDBLite consensus disorder prediction 157 212 - -
Cone17ag0935 717 Pfam Protein kinase domain 425 675 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag0935 717 SMART serkin_6 421 684 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag0935 717 ProSiteProfiles Protein kinase domain profile. 421 684 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag0935 717 Coils Coil 372 392 - -
Cone17ag0935 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag0935 717 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 394 493 - -
Cone17ag0935 717 Pfam Universal stress protein family 17 145 IPR006016 -
Cone17ag0935 717 MobiDBLite consensus disorder prediction 179 198 - -
Cone17ag0935 717 Coils Coil 347 367 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0083 Cone-Chr17:463705 Cone17ag0935 Cone-Chr17:7322544 1.04E-189 dispersed
Cone17ag0935 Cone-Chr17:7322544 Cone20ag1403 Cone-Chr20:8955612 5.81E-211 dispersed
Cone17ag0935 Cone-Chr17:7322544 Cone20ag0278 Cone-Chr20:1246104 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82268 PF00862 Sucrose_synth 9.00E-10 CL0113 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0935 - - - 0.0