Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0937 ATGGAGCAGATAATTCCTGCATTCATAGTTCCAGTTAGGTTAGGCAGCAATCCAGTTTGTGATATCGTAAGTCTAAAGCTCATGGCTTCTAATAGTAGTAGTAGTACTGATGATTTGGAGAATGTGACTAGTGTTTCTGAAAAGGGCAGAGGCGATGAATTGGCCATAGTATCACATGAAAGTGAAGAAGATGATTCCCTTTCATTAGAAGGCGATCCAAATCTTGATGGGTCATGTTCTGTTTCCGTGGCGAGTGAGATTAGTAGTCTTTGTGGGGAAGATTTCTTGAGCTTTGAAGCATCTTCTGAAATAGAAAGTGATAATAAGACCATTTGCAGTGTTGAATCAATTGTTGTTGCTAAGGCTAGTAGTAAGTCAAGTGATCTACTTGCTCAAGATGGGTTTGCCTCTAAGTCATTGAAAATCGATCATCTTGTTCCATTACCGCTACAAAAGACAGTAAGCGGGACCATTGGTAGGAGCATTTTTGAAGTGGATTATGTCCCTCTTTGGGGATTCACTTCGATTTGTGGCAAGAGACCCGAAATGGAAGATTCTCTAGCAACCGTTCCTCAATTCTTAGAAATCCCAATTCAAATGCTAATAGGTGATAGGGTTCTTGACAGGACAAGCAAGTCTATAACCCATCAAACCATTCATTTCTTTGGAGTTTATGATGGCCATGGTGGTTCTCAGGTTGCGAATTACTGTCGTGACAGGATGCATAGGGCTCTAGCCGAGGAGATGGAATCTGTAGATATTGTTAGTGAATATAGTTGCCAAGAGCAATGGAGAAAGGCACTCAGTAATTGCTTTCTTAAGGTAGATTCTGAGGTGGGAGGAAAATCTAGCCTGGACCCTATTGCTCCTGAAACTGTCGGTTCAACTGCCGTGGTTGCTCTTACTTGTGCTTCTCACATTATCATAGCAAACTGTGGTGATTCTCGAGCCGTTTTGTATAGAGGGAAAGAATCTATTGCCTTGTCAGTAGATCACAAGCCGGATAGAGAGGATGAGTATGCAAGAATCGAAGCAGCAGGAGGGAAGGTCATAAAATGGAACGGATCTAGAGTTTTCGGTGTTCTTGCTATGTCTAGATCTATAGGTGATAGGTACTTAAAACCGTGGATTATTCCCGAGCCCGAAGTGACTTTTCTTCCTCGGACCAAAGATGATGAATGTCTTGTCTTAGCTAGTGATGGGTTATGGGATGTAATGTCAAATGAGGAGGTTTGTGATCTTGCCCGGAAAAGAATCCTTATCTGGCATAAAAAGAACGGGGTTATTACAACACCTCTTTCCGAAAGGGGTGTAGGGCCTGAACCGGCAGCTCAAGCAGCGGCAGAATATCTAGCGAACCGAGCGCTTCAAAAGGGTAGTAAGGACAACATCACCATTATTGTTGTGGATTTGAAAGCTCAAAGAAAGTTCAAGTCAAAAACATGA 1446 42.39 MEQIIPAFIVPVRLGSNPVCDIVSLKLMASNSSSSTDDLENVTSVSEKGRGDELAIVSHESEEDDSLSLEGDPNLDGSCSVSVASEISSLCGEDFLSFEASSEIESDNKTICSVESIVVAKASSKSSDLLAQDGFASKSLKIDHLVPLPLQKTVSGTIGRSIFEVDYVPLWGFTSICGKRPEMEDSLATVPQFLEIPIQMLIGDRVLDRTSKSITHQTIHFFGVYDGHGGSQVANYCRDRMHRALAEEMESVDIVSEYSCQEQWRKALSNCFLKVDSEVGGKSSLDPIAPETVGSTAVVALTCASHIIIANCGDSRAVLYRGKESIALSVDHKPDREDEYARIEAAGGKVIKWNGSRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRTKDDECLVLASDGLWDVMSNEEVCDLARKRILIWHKKNGVITTPLSERGVGPEPAAQAAAEYLANRALQKGSKDNITIIVVDLKAQRKFKSKT 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7332025 7335152 + Conep17aG0096400.1 Cone17ag0937 456414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0937 481 Pfam Protein phosphatase 2C 213 464 IPR001932 -
Cone17ag0937 481 SUPERFAMILY PP2C-like 165 472 IPR036457 -
Cone17ag0937 481 CDD PP2Cc 172 471 IPR001932 -
Cone17ag0937 481 SMART PP2C_4 160 469 IPR001932 -
Cone17ag0937 481 FunFam Protein phosphatase 2C 16 158 481 - -
Cone17ag0937 481 PANTHER PROTEIN PHOSPHATASE 115 470 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0009788(PANTHER)|GO:0035970(PANTHER)
Cone17ag0937 481 ProSitePatterns PPM-type phosphatase domain signature. 221 229 IPR000222 GO:0043169(InterPro)
Cone17ag0937 481 Gene3D - 157 481 IPR036457 -
Cone17ag0937 481 ProSiteProfiles PPM-type phosphatase domain profile. 170 471 IPR001932 -
Cone17ag0937 481 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0937 Cone-Chr17:7332025 Cone7ag1233 Cone-Chr7:9143732 2.17E-161 dispersed
Cone18ag0629 Cone-Chr18:3239120 Cone17ag0937 Cone-Chr17:7332025 2.10E-19 transposed
Cone17ag0937 Cone-Chr17:7332025 Cone20ag0280 Cone-Chr20:1254286 0 wgd
Cone17ag0937 Cone-Chr17:7332025 Cone7ag1594 Cone-Chr7:10900747 4.57E-25 wgd
Cone17ag0937 Cone-Chr17:7332025 Cone7ag0047 Cone-Chr7:202661 1.60E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0937 K14497 - vvi:100242262 590.882