Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone17ag0949 | ATGAGCCTACGCAGAGGCTCCAAGGTCTGGGTGGAAGACCGGAGCTCCGCTTGGGTGGCAGCTGAAGTTCTCGATTGCAGTGGCAAACTAGTTCAAGTTGTAACTGCTTCCGGAAAGAAGGTTTCGGTATCTCCGGAGAAGGTATTTCCGAGAGATGCAGACGAGGAGGATCATGGAGGAGTTGACGACATGACGAAATTGACATATTTGAACGAGCCGGGGGTGCTGTATAATCTTCAGCGAAGATATGGTCTCAATGATATATATACTTACACGGGTAGCATTTTGATTGCGGTTAATCCATTCACCAAGCTCCCTCATCTATACAATGTACACATGATGGAACAGTACAAAGGAGCCCCTTTTGGTGAACTGAGTCCTCACGTTTTTGCAGTTGCTGATGCATCATATAGAGCAATGATCAGTGAAGGTCAAAGTCAGTCTATACTTGTCAGTGGAGAAAGTGGGGCTGGTAAAACTGAGACAACAAAACTGATAATGCAATATCTCACTTATGTTGGCGGTCGAGCTGCTGGTGATGACAGAACAGTAGAGCAGCAGGTTCTTGAATCGAATCCACTCTTGGAGGCATTCGGTAACGCAAGGACTGTTAGAAATGATAATTCAAGTCGTTTTGGAAAGTTCGTTGAGATCCAATTTGATGCAAATGGTAGAATATCTGGCGCTGCAATTAGAACTTACCTTTTGGAAAGGTCTCGTGTAGTTCGCATTACAGACCCTGAGAGGAACTATCACTGTTTTTATCATTTGTGTGCATCTAGGGATGCAGAGAAATACAAGTTAGACCATCCAAGTCATTTCCACTACTTAAATCAAAGCAAGACCTATGAATTAGATGGTGTGAACAATGCTGAGGAATATATGAAGACGAGGAGGGCAATGGAAATAGTTGGTTTAAGCTATGAAGATCAGGAAGCTATTTTTCGATCCTTGGCTGCAATTTTGCATTTAGGTAACATTGAATTTTCTCCTGGAAAGGAGCATGACTCTTCAGTCATAAAGGATAAAAAATCTAGCTTGCATCTACAGATGGCTGCTGAGCTTTTCATGTGTGATGTGAATCTCTTGCTGTCAACACTCTGTACCCGTTCAATCCAAACTCGTGAAGGAAATATTATCAAAGCTCTTGACTGTAATGCTGCTGTTGCTAGTCGGGATGCATTGGCGAAGACTGTTTATTCCAGACTGTTTGATTGGCTTGTTGATAAAATTAATAAGTCTGTTGGGCAAGATCTTGACTCCCGTATGCAGATTGGAGTGTTGGACATCTATGGTTTTGAATGCTTTAAGGATAACAGTTTTGAGCAGTTTTGCATCAATTTTGCAAATGAAAAGCTTCAACAACATTTCAATGAGCACGTATTCAAGATGGAGCAGGAGGAATATAGCAAAGAAGAAATTAATTGGAGCTACATTGAATTTATAGACAACCAGGATGTGTTGGATTTGATCGAAAAGAAACCTATTGGGATAATTGCTCTGTTGGATGAGGCTTGCATGTTCCCAAAATCAACACATAAAACATTTTCGACCAGATTATTTCAGAATTGCCGGTCCCATTCTAGGTTGCAAAAAGAAAAATTTTCGGAAACAGATTTTACCATTTCCCATTATGCTGGAAAGGTCACTTATCATACAGATAGCTTCTTAGACAAAAATCGTGATTATGTTGTGGTAGAACACTGTAATCTATTGTCTTCATCCAAATGCACCTTTGTTGCTTCTCTTTTCCCTTCACTGCCTGAAGAATCTTCAAGATCGTCTTACAAATTTTCTTCAGTTGCCACTAGATTTAAGCAACAACTTCAGGCTCTTATGGAAACTCTCAACTCAACAGAACCTCATTATATACGTTGTGTGAAGCCAAACTCTCTTAATCGACCTCACAAGTTTGAAAATCTGAGTGTTCTGCACCAGTTGCGCTGTGGGGGTGTTTTGGAGGCTGTTCGCATAAGTTTGGCTGGTTATCCCACTAGGCGGACTTATTCAGAGTTTATAGATCGATTTGGGCTGCTTGCTCCTGAATTGCTGGATGGAAGTTATGATGAAAAGGCTACAACAGAAAAAGTTCTACAAAAACTGAAGCTCGGGAATTTTCAGTTGGGAAGAACCAAAGTGTTTCTTAGGGCTGGCCAAATTGGCATGCTAGATGCCCGACGGGCTGAAGTACTGGATAATGCTGCAAGGTGTATTCAACGACGACTGCGTACACATTATGCACATAGGGAATTTCTCTCGATCCACGCATCTGCTGTTGTACTCCAAACATATTGCAGAGGGCACCTTACAAGAAAGACGTATGCTGCAAAACGAGAAGCCAGGGCTGCTACCACACTACTAAAACATATCCGCAGTTGGCTGTTAAGGCGCGCTTATATGAAACTTTATTCAGCTGCACTAACTATACAGTCCAACATTCGAGGTTTCTCAACTCGCCAGAGATTTTTGTATGGAAAGAAGCATAAAGCTGCCACTGTGATTCAGGTTCGATGGAGGACACGCAAGGTTCGTGCTGCTTTCCGGCATTACCATTCTTCTATCATAGCAGTCCAATGCCGTTGGAGGCAAAAGATGGCCAAAAGAGAACTCCGAAGGCTTAAACAAGAAGCTAATGAAACTGGAGCATTGCGATTGGCTAAGAATAAACTTGAGAAGCAGTTAGAAGATCTCACATGGCGTTTGCATCTTGAGAAAAGATTGCGGATCTCCAATGAAGAGGTCAAGTCAACTGAAATTTCAAAACTTCAGAAGACAGTGGAATCCTTGAACCTGGAATTAGATGCTGCTAAGTTGGCGACGATTAATGAGTGCAACAAGAATGCAATGCTGCAGAATCAATTAGATTTGTCTGCAAAGGAGAAGCATGCTTTGGAAAGAGAAATTACAGCAATGGCTGGAATGAGGAAAGAAAATGTGTTGCTAAAGAATTCCTTGGATTGCTTAGAGAAAAAGAAGTCTAGTCTGGAGCTTGAGCTCATCAAGGCACAAAAGGATAATAAGGACACCATTGAGAAGTTGCAGGAAGTTGAACAGAAGTGTGCTCAGCTCCAACAGAATATGAAAAGTCTCGAGGAAAAACTCTCAATATTGGAGGACGAGAATCATGTTTTGCGACAAAAAGCAATAGCAACACCTAAGAGCGTCCGTCCTGGTTTTGTAAAGCCAATAACAGAGAAATCCGCTGGAGTACTTGCTCTCTCTCAGATAGACCGGAAGTCTGCATTTGAATCACCAACACCTACAAAACTTATTGCACCTTTTTCACATGGCCTATCAGAATCACGTCGAACAAAATTTACAGTAGAGAAGCACCAGGAAAATTATGAATTCCTCTCAAGGTGTATCAAAGAAGATTTGGGTTTTAAAGATGGTAAACCACTGGCTGCTTGTATCATATACCGATGTCTTCTCCACTGGCATGCCTTTGAATCAGAGAGGACTGTTATCTTCGATTATATAATTGAAGGAATTAATGAGGCTCTGAAGGCTGGAGATGAGAACGTTACCTGGCCATATTGGCTGTCTAATGCGTCAGCTCTCCTATGCCTCCTACAGAGGAACTTACACTCCAATGGATTTCTAACTGCGGCTACTCAGCGTTCTACCTTATCTTCTGGATTAGCGAGTAGGATTGGCCAAGGAATCAAATCACCTTTCAAATTAATTGGATTTGATGATGGTGCCTCACATCTTGAAGCTCGGTATCCAGCTATACTGTTCAAACAACAATTAACTGCTTGTGTGGAGAAGATTTTTGGCTTGATTCGTGATAATTTGAAGAAAGAATTATCTCCACTGTTGGGCTCATGCATTCAGGCCCCCAAAGCTGGAAGAGGGATTGCTGGAAAATCCTCCAAGTCACCTGGTGGTATTGCTCAGCAGTCCTCAAATAGTCCGTGGGACAAGATTACCAAGTTTCTTGATTCTCATATGAGTCAATTACGAGAAAGTCATGTACCTTCATTCTTCATCCGTAAATTAGTTACCCAAGTGTTCTCTTTCATTAATATATCCCTTTTCAATAGTCTTCTTCTGAGACGGGAATGTTGCTCATTTTCAAATGGAGAATATATAAAATCTGGCCTAGCAGACTTAGAGAAGTGGATTGTCAATGCGAAGGAAGAGTATGCAGGAACCTCTTGGCACGAGCTAAATTATATTAGACAAGCTGTTGGGTTTCTGGTTATACATCAGAAGAGAAAGAAATCACTTGATGAAATAAGACAGGATCTCTGTCCGGCATTGACCATTAGACAAATATATCGAATTAGTACAATGTATTGGGATGACAAATACGGCACTCAGAGTGTCTCAAATGAGGTGGTTGCTCAAATGAGGGAGATGGTGAGTAAGGATAATCAGAATTTAACCTCCAATTCATTCTTGCTGGATGATGATCTTAGCATCCCATTTTCAACTGAAGACATAGATATGGCAATCCCTACAATAGATCCTTCAGAAGTTGAACTTCCCGGATCACTGTCCGAACATTCCTGTGCCCAGTTTCTTGTTCACCTTCAAAAGTAA | 4548 | 41.45 | MSLRRGSKVWVEDRSSAWVAAEVLDCSGKLVQVVTASGKKVSVSPEKVFPRDADEEDHGGVDDMTKLTYLNEPGVLYNLQRRYGLNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEGQSQSILVSGESGAGKTETTKLIMQYLTYVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDANGRISGAAIRTYLLERSRVVRITDPERNYHCFYHLCASRDAEKYKLDHPSHFHYLNQSKTYELDGVNNAEEYMKTRRAMEIVGLSYEDQEAIFRSLAAILHLGNIEFSPGKEHDSSVIKDKKSSLHLQMAAELFMCDVNLLLSTLCTRSIQTREGNIIKALDCNAAVASRDALAKTVYSRLFDWLVDKINKSVGQDLDSRMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHKTFSTRLFQNCRSHSRLQKEKFSETDFTISHYAGKVTYHTDSFLDKNRDYVVVEHCNLLSSSKCTFVASLFPSLPEESSRSSYKFSSVATRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPHKFENLSVLHQLRCGGVLEAVRISLAGYPTRRTYSEFIDRFGLLAPELLDGSYDEKATTEKVLQKLKLGNFQLGRTKVFLRAGQIGMLDARRAEVLDNAARCIQRRLRTHYAHREFLSIHASAVVLQTYCRGHLTRKTYAAKREARAATTLLKHIRSWLLRRAYMKLYSAALTIQSNIRGFSTRQRFLYGKKHKAATVIQVRWRTRKVRAAFRHYHSSIIAVQCRWRQKMAKRELRRLKQEANETGALRLAKNKLEKQLEDLTWRLHLEKRLRISNEEVKSTEISKLQKTVESLNLELDAAKLATINECNKNAMLQNQLDLSAKEKHALEREITAMAGMRKENVLLKNSLDCLEKKKSSLELELIKAQKDNKDTIEKLQEVEQKCAQLQQNMKSLEEKLSILEDENHVLRQKAIATPKSVRPGFVKPITEKSAGVLALSQIDRKSAFESPTPTKLIAPFSHGLSESRRTKFTVEKHQENYEFLSRCIKEDLGFKDGKPLAACIIYRCLLHWHAFESERTVIFDYIIEGINEALKAGDENVTWPYWLSNASALLCLLQRNLHSNGFLTAATQRSTLSSGLASRIGQGIKSPFKLIGFDDGASHLEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGSCIQAPKAGRGIAGKSSKSPGGIAQQSSNSPWDKITKFLDSHMSQLRESHVPSFFIRKLVTQVFSFINISLFNSLLLRRECCSFSNGEYIKSGLADLEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLDEIRQDLCPALTIRQIYRISTMYWDDKYGTQSVSNEVVAQMREMVSKDNQNLTSNSFLLDDDLSIPFSTEDIDMAIPTIDPSEVELPGSLSEHSCAQFLVHLQK | 1515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 7414370 | 7432396 | + | Conep17aG0097600.1 | Cone17ag0949 | 456426 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone17ag0949 | 1515 | Coils | Coil | 947 | 967 | - | - | |
| Cone17ag0949 | 1515 | ProSiteProfiles | IQ motif profile. | 754 | 783 | - | - | |
| Cone17ag0949 | 1515 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 307 | 597 | - | - | |
| Cone17ag0949 | 1515 | ProSiteProfiles | IQ motif profile. | 802 | 831 | - | - | |
| Cone17ag0949 | 1515 | ProSiteProfiles | Dilute domain profile. | 1158 | 1458 | IPR002710 | - | |
| Cone17ag0949 | 1515 | SMART | DIL_2 | 1333 | 1440 | IPR002710 | - | |
| Cone17ag0949 | 1515 | Pfam | IQ calmodulin-binding motif | 804 | 822 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0949 | 1515 | Pfam | IQ calmodulin-binding motif | 755 | 774 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0949 | 1515 | SMART | iq_5 | 730 | 752 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0949 | 1515 | SMART | iq_5 | 753 | 775 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0949 | 1515 | SMART | iq_5 | 801 | 823 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0949 | 1515 | SMART | iq_5 | 826 | 848 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0949 | 1515 | SMART | iq_5 | 778 | 800 | IPR000048 | GO:0005515(InterPro) | |
| Cone17ag0949 | 1515 | CDD | MyosinXI_CBD | 1109 | 1481 | IPR037975 | GO:0007015(InterPro) | |
| Cone17ag0949 | 1515 | PANTHER | MYOSIN | 9 | 1456 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cone17ag0949 | 1515 | CDD | MYSc_Myo11 | 73 | 716 | IPR036018 | - | |
| Cone17ag0949 | 1515 | Coils | Coil | 919 | 939 | - | - | |
| Cone17ag0949 | 1515 | Gene3D | - | 249 | 305 | - | - | |
| Cone17ag0949 | 1515 | SMART | MYSc_2a | 53 | 729 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0949 | 1515 | Coils | Coil | 887 | 907 | - | - | |
| Cone17ag0949 | 1515 | Gene3D | - | 802 | 846 | - | - | |
| Cone17ag0949 | 1515 | ProSiteProfiles | Myosin motor domain profile. | 59 | 728 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0949 | 1515 | FunFam | Myosin heavy chain | 249 | 302 | - | - | |
| Cone17ag0949 | 1515 | Gene3D | - | 434 | 619 | - | - | |
| Cone17ag0949 | 1515 | ProSiteProfiles | IQ motif profile. | 850 | 879 | - | - | |
| Cone17ag0949 | 1515 | Pfam | DIL domain | 1334 | 1437 | IPR002710 | - | |
| Cone17ag0949 | 1515 | Pfam | Myosin head (motor domain) | 61 | 716 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0949 | 1515 | Gene3D | - | 730 | 784 | - | - | |
| Cone17ag0949 | 1515 | Gene3D | - | 663 | 729 | - | - | |
| Cone17ag0949 | 1515 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 28 | 777 | IPR027417 | - | |
| Cone17ag0949 | 1515 | Gene3D | Kinesin motor domain | 62 | 658 | IPR036961 | - | |
| Cone17ag0949 | 1515 | PRINTS | Myosin heavy chain signature | 146 | 171 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0949 | 1515 | PRINTS | Myosin heavy chain signature | 193 | 220 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0949 | 1515 | PRINTS | Myosin heavy chain signature | 424 | 452 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0949 | 1515 | PRINTS | Myosin heavy chain signature | 477 | 505 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0949 | 1515 | PRINTS | Myosin heavy chain signature | 89 | 108 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0949 | 1515 | Coils | Coil | 971 | 1047 | - | - | |
| Cone17ag0949 | 1515 | MobiDBLite | consensus disorder prediction | 1285 | 1304 | - | - | |
| Cone17ag0949 | 1515 | Pfam | Myosin N-terminal SH3-like domain | 6 | 48 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone17ag0949 | 1515 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 4 | 53 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone17ag0949 | Cone-Chr17:7414370 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone17ag0291 | Cone-Chr17:1396636 | Cone17ag0949 | Cone-Chr17:7414370 | 0 | wgd | |
| Cone17ag0949 | Cone-Chr17:7414370 | Cone20ag0292 | Cone-Chr20:1301520 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone17ag0949 | K10357 | - | csv:101210527 | 2513.41 |