Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag0984 ATGGCGTTGTTTCGGAAGTTCTTTTACCGGAAACCGCCGGATGGACTTCTCGAGATTTCCGAAAGGGTTTATGTGTTCGATTACTGTTTTACTACGGATGTTTTGGAAGACAATGAATATAAAGTCTACATAGGAGGAATAGTATCGCAACTGCGTGATCATCTACCTGATGCTTCATTCATGGTGTTTAATTTCCGAGAAGGAGATAACCAGAGCCAGATTTCTAATATATTATCGGATTATGACATGACTGTAATGGACTACCCTAGGCAGTATGAAGGCTGTCCATTACTAACAATGGAGATGATTCATCACTTTTTGAGGTCGGGTGAAAGCTGGCTCTTACTCGGTCAACAGAATGTGCTTCTGATGCATTGTGAGAGGGGGGGGTGGCCCGTCTTGGCATTCATGCTAGCTGCTCTGTTGATTTATCGAAAGCAATATGCGGGAGAGCAGAAAACGTTGGACATGATTTACAAGCAAGCACCTAAGGAGCTTTTGCAATTGATGTCTGCTTTGAACCCTTTACCTTCTCAATTGAGGTATCTTCAGTATGTTTCGAGGAGAAATGTGGCTTCGGAGTGGCCCCCGCTTGATCGAGCGCTAACCTTGGATTGTATTATAATTAGATTTATTCCTCGAATGGATAGTGAGGGTGGCTGCCGTCCGATTTTTAGGATATATGGACAGGATACTTTAGCGGGTTCCGATCGAACTTCAAAAGTTCTCTTCTCCACGCCAAAGAGGAGCAAATTTGTCCGGTACTATAAACAGGAAGATTGTGAACTAATCAAAATCGACATCCATTGCCATATCCAAGGGGATGTAGTTCTTGAGGCTATTAGTTTGGAAGAGGATCTAGAACGAGAGATTATGATGTTTCGAGTCATGTTCAATACAGCCTTCATAAGATCAAATATTTTAATGCTAAACCGTGATGAAATCGATATGTTATGGACGATTAAGGATCAATTTCCTAAGGATTTCAGAGCAGAGGTTCTTTTCTCAGAAATGGATGCTGCTACTTCCCGTTTTTCAATTGAATTACCCAACATTGAGGATAAAGAGGGCCTTCCTATTGAAGCATTTGCTAAAGTGAAAGAGATTTTCAGTAGTGTGGATTGGCTAGACCCAAAGAAGGATATGGCACTAAATGTTCTCCAGCAAATCACAGCAACAGGTTTCCTTCATGAAATGAAGGATGCCAGTTCTCCTGTGCATCCAGAGATGGGAAAAGTATCGCCCCAATCTACTTTTGAAGAAGTTAAAGCAAAAGCTAAAACATTAGGAAAAACAATCAAGCCTACCCCTTCATTTGAAAACCAGCCAAAACAATCTGAAGGGAACATCAAAATTCCTTCATCTGAGATTGAAACAGAACAATCTATTTATTCCAAAGAGAACATCAAAATCCCCTCATTTCAGAACAAGACAAAACAAACTGCTTCCCCTGAAGACAGCATCAGAACTTCTTTGTTAGAGAAACAGACAGAACAATCTGTTTCCTCAGCAGATGAGATCAGAACCTCTTCATCAGAGAAGCAGAGAAAACAACCCATTTATTCTTCTGGCCAATCTTTAGCTACAAACTCAGTAAGAAGGAAGATTGAACCTCTTGAACTGCAGGTTTCAGTCCAAAGATCTACCCAATCTAAGATCATATCCCAGCGGATCCCACATACTTCTCGATCCGCACCAGTTTCATTGCAAGGTTCACCTGTGCCTATTTCTAGATATCATAGTGCTCCCTCATCTCTCGGAATTACAGCACTATTGCACGATCATGCTACATCTAATTCTGAACCAGTAATATCTCAACTCTCCACCTCTACTTCAATGCCTCTATTAGATGTACGAAAACAAGTTTGGCCTGTTAGGCAACCTATTCCACCGCTATCACCACAAGCACCATCTTCAACTACCGAGGTAACTTCCGCTGATCCTTCACAGACTCCATCTTTTAAACCGACTACATTTTCGCCCTCAGTCCCACCGCCTTCTACTGATAGTTTAGTTTCAATACCTCCATCTCCACCACCACCACCACCACCAACCTCATCATCGGGGGAATCTACATCTTCATCTGTCAAGAAGTCATCTTCATCTCCACCTCCTCCCTCTTCTTCATTCAAGGACTCATTATTGCCCCCTCCCCCTCCTCTTCCGCCTCTTTCATCCAAAATCGCCCTTTCAACTTCCATTCCTCTTCCTCCTCCACCGCCCAAGGTACCATCTTCAACTTCTACTTCTACTTCCTCTCAACCGCCTCCTCCACCTCCTACCTCTGGACTATCTGCCGACTCTTCAGCTCCACCACCGCCTCCACCTCCTTACTCAGGACGATCTGCAGCATCTTCAGCCCCACCACCACCTCCACCTCCACCTCCTAACTCAGGAATATGTACAGTATCTTCAGCACCACCACCACCACCTCCGACCCCAGGACGACCGGCAGTTTCTGCTCCACCACCACCTCCTACCCCAGGACGACCGGCAGTTTCTGCTCCACCACCACCTCCTCCTCCAAGTATTCCTATCAAGGAATCTTCATCTAAAAATCAGTCACATGCTCCTCCTATTCCACCTCCTCCTGCTCCTTCTGTGAAAGGATTAGTGAAATCCAGTGGCGCATCTCCCAATGGTAATGTACCTGCGATTCCCGGCCCCCCTTCCAGTGCTCCTTTCAATTTAAAGGGACAGCCCCCATCACGACCAAATACCAAGAATCAGGCTTTATCTAGAAAGAGCAATCTCAAGCCTTATCATTGGCTAAAGTTAACAAGGGCCATGCAAGGAAGCTTATGGGCTGAAGCACAGAAAGCTGATGAAGCTTCCAAGGCTCCAGAGTTTGATATGTCAGAAATTGAGAGTCTTTTCTCCATAGCAGCTCCAAATTCAGATAATGGGAACAGTTCCGAGAAGTCCAATCGCCGTGCATTGGGTCCTAAAATCGAGAAAGTTCAGCTGATTGAGCTGAGACGAGCATATAATTGTGAAATCATGCTTACCAAGGTTAAGATACCCTTGCCTGATTTGATGAGCTCAGTCCTTGCCTTGGATGATTCAGCATTGGATGTCGATCAAATTGAGAACCTTATTAAGTTTTGTCCAACAAAGGAAGAGATGGAACAACTTAAGGCTTACACTGGAGATAAGGAAAATTTGGGAAAATGTGAACAGTTCTTTTTTGAATTAATGAAAGTACCACGTGTAGAGGCAAAGCTAAGAGTCTTTTCATTTAAGATACAATTCCGTTCTCAGGTTTCTGATCTTAGAAATAGTCTCAATATTGTGAACTCAGCATCTGAAGAGATCAGAAGTTCGGCCAAGTTGAAAAGAATAATGCAAACCATTCTTTCTCTGGGCAATGCTCTAAACCATGGAACTGCAAGAGGTTCTGCCATTGGATTTCGGCTGGATAGTCTTCTAAAACTCACTGATACTCGAGCCCGAAACAACAAGATGACTCTCATGCATTATTTGTGTAAGGTGCTTGCTGAAAAGCTACCAGAACTTCTAGATTTTCATAAAGATCTTGTGAGTTTGGAAGCTTCAACAAAGATACAATTGAAGTACTTGGCAGAGGAAATGCAAGCCATTAGTAAAGGGCTTGAGAAGGTTGTACAGGAATTGACTACCTCTCAAAATGACGGCCCTGTTTCAGAATACTTTTGTGAGACTTTAAAGGAATTCCTTAGCCATGCCGAAGCAGATGTGAGGTGTTTAGCTTCACTTTATTCTGGTGTGGGTAGAAATGCAGATGCCTTGGCTCTTTATTTCGGAGAAGATCCGGCTCGTTGTCCCTTCGAGCAAGTTGTCTCTACCTTGCTAAACTTTGTGAGAATGTTTGTTCGAGCTCATGAGGAAAACTGCAAGAAAATTGAACTTGAAAATAAGAAAGCGCAAAAAGAAGCTGAAAATGAGAAGCTGAAGATAAGCTCTCCAAGAAAGGTAAACTCTCCAAGAAAGGATTCTGAACGCTTGATGCAGAGTCCAACAAAAAGTAGCAACTTCAAATGA 4020 43.23 MALFRKFFYRKPPDGLLEISERVYVFDYCFTTDVLEDNEYKVYIGGIVSQLRDHLPDASFMVFNFREGDNQSQISNILSDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGESWLLLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYAGEQKTLDMIYKQAPKELLQLMSALNPLPSQLRYLQYVSRRNVASEWPPLDRALTLDCIIIRFIPRMDSEGGCRPIFRIYGQDTLAGSDRTSKVLFSTPKRSKFVRYYKQEDCELIKIDIHCHIQGDVVLEAISLEEDLEREIMMFRVMFNTAFIRSNILMLNRDEIDMLWTIKDQFPKDFRAEVLFSEMDAATSRFSIELPNIEDKEGLPIEAFAKVKEIFSSVDWLDPKKDMALNVLQQITATGFLHEMKDASSPVHPEMGKVSPQSTFEEVKAKAKTLGKTIKPTPSFENQPKQSEGNIKIPSSEIETEQSIYSKENIKIPSFQNKTKQTASPEDSIRTSLLEKQTEQSVSSADEIRTSSSEKQRKQPIYSSGQSLATNSVRRKIEPLELQVSVQRSTQSKIISQRIPHTSRSAPVSLQGSPVPISRYHSAPSSLGITALLHDHATSNSEPVISQLSTSTSMPLLDVRKQVWPVRQPIPPLSPQAPSSTTEVTSADPSQTPSFKPTTFSPSVPPPSTDSLVSIPPSPPPPPPPTSSSGESTSSSVKKSSSSPPPPSSSFKDSLLPPPPPLPPLSSKIALSTSIPLPPPPPKVPSSTSTSTSSQPPPPPPTSGLSADSSAPPPPPPPYSGRSAASSAPPPPPPPPPNSGICTVSSAPPPPPPTPGRPAVSAPPPPPTPGRPAVSAPPPPPPPSIPIKESSSKNQSHAPPIPPPPAPSVKGLVKSSGASPNGNVPAIPGPPSSAPFNLKGQPPSRPNTKNQALSRKSNLKPYHWLKLTRAMQGSLWAEAQKADEASKAPEFDMSEIESLFSIAAPNSDNGNSSEKSNRRALGPKIEKVQLIELRRAYNCEIMLTKVKIPLPDLMSSVLALDDSALDVDQIENLIKFCPTKEEMEQLKAYTGDKENLGKCEQFFFELMKVPRVEAKLRVFSFKIQFRSQVSDLRNSLNIVNSASEEIRSSAKLKRIMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFHKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELTTSQNDGPVSEYFCETLKEFLSHAEADVRCLASLYSGVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFVRAHEENCKKIELENKKAQKEAENEKLKISSPRKVNSPRKDSERLMQSPTKSSNFK 1339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7577492 7584247 + Conep17aG0101100.1 Cone17ag0984 456461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 430 457 - -
Cone17ag0984 1339 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Cone17ag0984 1339 Gene3D Formin, FH2 domain 904 1294 IPR042201 -
Cone17ag0984 1339 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Cone17ag0984 1339 Gene3D - 196 341 - -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 897 916 - -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 636 657 - -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 434 457 - -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 1299 1339 - -
Cone17ag0984 1339 Pfam Formin Homology 2 Domain 913 1283 IPR015425 -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 658 687 - -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 733 846 - -
Cone17ag0984 1339 Coils Coil 1284 1313 - -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 1299 1329 - -
Cone17ag0984 1339 ProSiteProfiles Formin homology-2 (FH2) domain profile. 908 1309 IPR015425 -
Cone17ag0984 1339 SMART it6_source 619 1336 IPR015425 -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 475 529 - -
Cone17ag0984 1339 SMART PTEN_C2_2 197 337 IPR014020 -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 627 917 - -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 688 708 - -
Cone17ag0984 1339 SUPERFAMILY Formin homology 2 domain (FH2 domain) 837 1303 - -
Cone17ag0984 1339 PANTHER FORMIN-J 789 1309 IPR051144 -
Cone17ag0984 1339 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Cone17ag0984 1339 MobiDBLite consensus disorder prediction 709 725 - -
Cone17ag0984 1339 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Cone17ag0984 1339 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0054 Cone-Chr13:337662 Cone17ag0984 Cone-Chr17:7577492 3.94E-287 dispersed
Cone16ag0189 Cone-Chr16:1212438 Cone17ag0984 Cone-Chr17:7577492 6.79E-281 dispersed
Cone17ag0984 Cone-Chr17:7577492 Cone2ag0827 Cone-Chr2:34275656 2.44E-280 dispersed
Cone12ag0537 Cone-Chr12:3764208 Cone17ag0984 Cone-Chr17:7577492 2.86E-274 transposed
Cone2ag0575 Cone-Chr2:3333078 Cone17ag0984 Cone-Chr17:7577492 0 transposed
Cone8ag0537 Cone-Chr8:3939933 Cone17ag0984 Cone-Chr17:7577492 9.91E-289 transposed
Cone17ag0984 Cone-Chr17:7577492 Cone20ag0324 Cone-Chr20:1435871 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag0984 K28090 - mdm:103421015 741.88